RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	CBP1	P07252	654 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	PUT2	P07275	575 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	PUT4	P15380	627 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	PMA2	P19657	947 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	DBP3	P20447	523 aa	Known RBP	5.54	□□□□□ -1.52
SNF11	YDR073W	KRE2	P27809	442 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	PMI40	P29952	429 aa	Known RBP	5.54	□□□□□ -1.52
SNF11	YDR073W	EMP70	P32802	667 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	YTP1	P53584	459 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	HEF3	P53978	1044 aa	Known RBP	5.54	□□□□□ -1.52
SNF11	YDR073W	YVH1	Q02256	364 aa	Known RBP	5.54	□□□□□ -1.52
SNF11	YDR073W	RRB1	Q04225	511 aa	Known RBP	5.54	□□□□□ -1.52
SNF11	YDR073W	YLH47	Q06493	454 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	YIL002W-A	Q3E7Z5	69 aa		5.54	□□□□□ -1.52
SNF11	YDR073W	BRR1	Q99177	341 aa	Predicted RBP	5.54	□□□□□ -1.52
SNF11	YDR073W	BI2	P03873	423 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	GAL7	P08431	366 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	HEM1	P09950	548 aa	Predicted RBP	5.53	□□□□□ -1.52
SNF11	YDR073W	YCR006C	P25350	157 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	ELM1	P32801	640 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	MTR2	P34232	184 aa	Known RBP	5.53	□□□□□ -1.52
SNF11	YDR073W	MIA40	P36046	403 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	ASC1	P38011	319 aa	Known RBP	5.53	□□□□□ -1.52
SNF11	YDR073W	ULP2	P40537	1034 aa	Predicted RBP	5.53	□□□□□ -1.52
SNF11	YDR073W	SNG1	P46950	547 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	EFM3	P47163	339 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	SLG1	P54867	378 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	ABZ2	Q03266	374 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	RAD61	Q99359	647 aa		5.53	□□□□□ -1.52
SNF11	YDR073W	STE3	P06783	470 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	PEP4	P07267	405 aa	Known RBP	5.52	□□□□□ -1.53
SNF11	YDR073W	RIP1	P08067	215 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	YKL023W	P36103	277 aa	Known RBP	5.52	□□□□□ -1.53
SNF11	YDR073W	VPS41	P38959	992 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	AIP1	P46680	615 aa	Known RBP	5.52	□□□□□ -1.53
SNF11	YDR073W	NMD5	P46970	1048 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	YJL043W	P47053	257 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	YIP5	P53108	310 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	PIB2	P53191	635 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	ALF1	P53904	254 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	TIM11	P81449	96 aa	Predicted RBP	5.52	□□□□□ -1.53
SNF11	YDR073W	APM1	Q00776	475 aa	Predicted RBP	5.52	□□□□□ -1.53
SNF11	YDR073W	EGD1	Q02642	157 aa	Known RBP	5.52	□□□□□ -1.53
SNF11	YDR073W	YDR541C	Q03049	344 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	NDL1	Q06568	189 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	SRN2	Q99176	213 aa		5.52	□□□□□ -1.53
SNF11	YDR073W	SCH9	P11792	824 aa	Known RBP	5.51	□□□□□ -1.53
SNF11	YDR073W	GCD2	P12754	651 aa	Predicted RBP	5.51	□□□□□ -1.53
SNF11	YDR073W	SGV1	P23293	657 aa	Known RBP	5.51	□□□□□ -1.53
SNF11	YDR073W	CLB2	P24869	491 aa		5.51	□□□□□ -1.53
SNF11	YDR073W	RHB1	P25378	209 aa		5.51	□□□□□ -1.53
SNF11	YDR073W	RDS1	P25611	832 aa		5.51	□□□□□ -1.53
SNF11	YDR073W	CTS1	P29029	562 aa		5.51	□□□□□ -1.53
SNF11	YDR073W	REC114	P32841	428 aa		5.51	□□□□□ -1.53
SNF11	YDR073W	BNA4	P38169	460 aa		5.51	□□□□□ -1.53
SNF11	YDR073W	OLA1	P38219	394 aa	Known RBP	5.51	□□□□□ -1.53
SNF11	YDR073W	AVT1	P47082	602 aa		5.51	□□□□□ -1.53
SNF11	YDR073W	ATG26	Q06321	1198 aa		5.51	□□□□□ -1.53
SNF11	YDR073W	YER145C-A	A0A023PYF4	145 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	CBP2	P03874	630 aa	Predicted RBP	5.5	□□□□□ -1.53
SNF11	YDR073W	LEU4	P06208	619 aa	Known RBP	5.5	□□□□□ -1.53
SNF11	YDR073W	ADE5,7	P07244	802 aa	Known RBP	5.5	□□□□□ -1.53
SNF11	YDR073W	GPA1	P08539	472 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	ALG1	P16661	449 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	ATP10	P18496	279 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	IME2	P32581	645 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	RPC34	P32910	317 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	EFM2	P38347	419 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	MNL1	P38888	796 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	YHR210C	P38893	341 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	EXO1	P39875	702 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	CDC1	P40986	491 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	CIN1	P40987	1014 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	YFR018C	P43599	363 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	ASN2	P49090	572 aa	Known RBP	5.5	□□□□□ -1.53
SNF11	YDR073W	SHE10	P53075	577 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	ROG1	P53118	685 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	ZPR1	P53303	486 aa	Known RBP	5.5	□□□□□ -1.53
SNF11	YDR073W	UTP6	Q02354	440 aa	Known RBP	5.5	□□□□□ -1.53
SNF11	YDR073W	MUK1	Q02866	612 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	GRX3	Q03835	250 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	ADE13	Q05911	482 aa	Known RBP	5.5	□□□□□ -1.53
SNF11	YDR073W	MCH4	Q08268	501 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	RKM1	Q08961	583 aa	Predicted RBP	5.5	□□□□□ -1.53
SNF11	YDR073W	ACF2	Q12168	779 aa		5.5	□□□□□ -1.53
SNF11	YDR073W	NCE102	Q12207	173 aa	RIP-Chip data	5.5	□□□□□ -1.53	not detected
SNF11	YDR073W	ERG11	P10614	530 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	HOM2	P13663	365 aa	Known RBP	5.49	□□□□□ -1.53
SNF11	YDR073W	NUP1	P20676	1076 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	KIN3	P22209	435 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	RNQ1	P25367	405 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	DMC1	P25453	334 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	SIN4	P32259	974 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	ECM25	P32525	599 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	ROT2	P38138	954 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	TCM62	P38228	572 aa	Known RBP	5.49	□□□□□ -1.53
SNF11	YDR073W	MSG5	P38590	489 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	SSO2	P39926	295 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	POP1	P41812	875 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	LYS20	P48570	428 aa	Known RBP	5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms