RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YGR066CP53242 292 aa3.96□□□□□ -1.78
SHR3YDL212W RBG2P53295 368 aaKnown RBP3.96□□□□□ -1.78
SHR3YDL212W SLG1P54867 378 aa3.96□□□□□ -1.78
SHR3YDL212W IMH1Q06704 911 aaKnown RBP3.96□□□□□ -1.78
SHR3YDL212W PMR1P13586 950 aa3.95□□□□□ -1.78
SHR3YDL212W GFD2P25370 566 aaKnown RBP3.95□□□□□ -1.78
SHR3YDL212W PAP1P29468 568 aaKnown RBP3.95□□□□□ -1.78
SHR3YDL212W YME1P32795 747 aa3.95□□□□□ -1.78
SHR3YDL212W YBR225WP38321 900 aa3.95□□□□□ -1.78
SHR3YDL212W MBB1P39534 108 aa3.95□□□□□ -1.78
SHR3YDL212W YMR147WP40218 223 aaKnown RBP3.95□□□□□ -1.78
SHR3YDL212W DOT5P40553 215 aa3.95□□□□□ -1.78
SHR3YDL212W MSO1P53604 210 aaKnown RBP3.95□□□□□ -1.78
SHR3YDL212W TIM10P87108 93 aa3.95□□□□□ -1.78
SHR3YDL212W MFB1Q04922 465 aa3.95□□□□□ -1.78
SHR3YDL212W YER078W-AQ3E7A2 54 aa3.95□□□□□ -1.78
SHR3YDL212W FAU1P40099 211 aa3.94□□□□□ -1.78
SHR3YDL212W SYG1P40528 902 aa3.94□□□□□ -1.78
SHR3YDL212W MET28P40573 187 aa3.94□□□□□ -1.78
SHR3YDL212W GCD10P41814 478 aa3.94□□□□□ -1.78
SHR3YDL212W CAF130P53280 1122 aaPredicted RBP3.94□□□□□ -1.78
SHR3YDL212W HNT3Q08702 217 aa3.94□□□□□ -1.78
SHR3YDL212W RAV1P47104 1357 aa3.93□□□□□ -1.78
SHR3YDL212W DFR1P07807 211 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SHR3YDL212W HSC82P15108 705 aaKnown RBP3.93□□□□□ -1.78
SHR3YDL212W EXO70P19658 623 aa3.93□□□□□ -1.78
SHR3YDL212W BUB3P26449 341 aa3.93□□□□□ -1.78
SHR3YDL212W FUN19P28003 413 aaPredicted RBP3.93□□□□□ -1.78
SHR3YDL212W RFS1P38234 210 aaKnown RBP3.93□□□□□ -1.78
SHR3YDL212W ERP2P39704 215 aa3.93□□□□□ -1.78
SHR3YDL212W RRD2Q12461 358 aa3.93□□□□□ -1.78
SHR3YDL212W YDL007C-AQ2V2Q0 85 aa3.93□□□□□ -1.78
SHR3YDL212W GCN4P03069 281 aa3.92□□□□□ -1.78
SHR3YDL212W MRE11P32829 692 aa3.92□□□□□ -1.78
SHR3YDL212W KTR5P53966 522 aaPredicted RBP3.92□□□□□ -1.78
SHR3YDL212W CHS1P08004 1131 aa3.91□□□□□ -1.78
SHR3YDL212W IMP2'P32351 346 aa3.91□□□□□ -1.78
SHR3YDL212W ELP2P42935 788 aa3.91□□□□□ -1.78
SHR3YDL212W RRT5P43607 289 aa3.91□□□□□ -1.78
SHR3YDL212W AVT4P50944 713 aa3.91□□□□□ -1.78
SHR3YDL212W PIR3Q03180 325 aa3.91□□□□□ -1.78
SHR3YDL212W FOB1O13329 566 aa3.9□□□□□ -1.79
SHR3YDL212W RPL31BP0C2H9 113 aaKnown RBP3.9□□□□□ -1.79
SHR3YDL212W REV1P12689 985 aa3.9□□□□□ -1.79
SHR3YDL212W CPR1P14832 162 aaKnown RBP3.9□□□□□ -1.79
SHR3YDL212W MFT1P33441 392 aaKnown RBP3.9□□□□□ -1.79
SHR3YDL212W SWH1P35845 1188 aa3.9□□□□□ -1.79
SHR3YDL212W FRE2P36033 711 aa3.9□□□□□ -1.79
SHR3YDL212W SPO22P40511 975 aa3.9□□□□□ -1.79
SHR3YDL212W ART5P53244 586 aaKnown RBP3.9□□□□□ -1.79
SHR3YDL212W PDS5Q04264 1277 aa3.9□□□□□ -1.79
SHR3YDL212W TAP42Q04372 366 aa3.9□□□□□ -1.79
SHR3YDL212W SMA2Q04658 369 aa3.9□□□□□ -1.79
SHR3YDL212W MRD1Q06106 887 aaKnown RBP3.9□□□□□ -1.79
SHR3YDL212W YDL121CQ07541 149 aa3.9□□□□□ -1.79
SHR3YDL212W YBP1P38315 674 aa3.89□□□□□ -1.79
SHR3YDL212W YDR239CQ03780 787 aa3.89□□□□□ -1.79
SHR3YDL212W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SHR3YDL212W HIP1P06775 603 aa3.88□□□□□ -1.79
SHR3YDL212W LPD1P09624 499 aaKnown RBP3.88□□□□□ -1.79
SHR3YDL212W CST26P38226 397 aa3.88□□□□□ -1.79
SHR3YDL212W MKT1P40850 830 aaKnown RBP3.88□□□□□ -1.79
SHR3YDL212W POP1P41812 875 aa3.88□□□□□ -1.79
SHR3YDL212W OCA1P50946 238 aaPredicted RBP3.88□□□□□ -1.79
SHR3YDL212W YGL108CP53139 140 aa3.88□□□□□ -1.79
SHR3YDL212W SEC39Q12745 709 aa3.88□□□□□ -1.79
SHR3YDL212W ARG3P05150 338 aa3.87□□□□□ -1.79
SHR3YDL212W OCA4P25366 362 aa3.87□□□□□ -1.79
SHR3YDL212W MRP4P32902 394 aa3.87□□□□□ -1.79
SHR3YDL212W YIL067CP40514 678 aa3.87□□□□□ -1.79
SHR3YDL212W TRS85P46944 698 aa3.87□□□□□ -1.79
SHR3YDL212W YOR387CQ08910 206 aa3.87□□□□□ -1.79
SHR3YDL212W NOP1P15646 327 aaKnown RBP3.86□□□□□ -1.79
SHR3YDL212W NDI1P32340 513 aa3.86□□□□□ -1.79
SHR3YDL212W GLC7P32598 312 aaKnown RBP3.86□□□□□ -1.79
SHR3YDL212W VMA13P41807 478 aaKnown RBP3.86□□□□□ -1.79
SHR3YDL212W RMD8P43620 662 aa3.86□□□□□ -1.79
SHR3YDL212W THP3Q12049 470 aaKnown RBP3.86□□□□□ -1.79
SHR3YDL212W MED1Q12321 566 aa3.86□□□□□ -1.79
SHR3YDL212W RRI2Q12348 645 aa3.86□□□□□ -1.79
SHR3YDL212W BRR1Q99177 341 aaPredicted RBP3.86□□□□□ -1.79
SHR3YDL212W NAM9P27929 486 aa3.85□□□□□ -1.79
SHR3YDL212W ISC1P40015 477 aaKnown RBP3.85□□□□□ -1.79
SHR3YDL212W MET18P40469 1032 aa3.85□□□□□ -1.79
SHR3YDL212W TWF1P53250 332 aa3.85□□□□□ -1.79
SHR3YDL212W CAF40P53829 373 aa3.85□□□□□ -1.79
SHR3YDL212W BUD21Q08492 214 aaPredicted RBP3.85□□□□□ -1.79
SHR3YDL212W ERV2Q12284 196 aa3.85□□□□□ -1.79
SHR3YDL212W HEM15P16622 393 aa3.84□□□□□ -1.79
SHR3YDL212W YIM1P28625 365 aa3.84□□□□□ -1.79
SHR3YDL212W GPI10P30777 616 aa3.84□□□□□ -1.79
SHR3YDL212W SEC66P33754 206 aa3.84□□□□□ -1.79
SHR3YDL212W PMT1P33775 817 aa3.84□□□□□ -1.79
SHR3YDL212W THI2P38141 450 aa3.84□□□□□ -1.79
SHR3YDL212W JJJ1P53863 590 aa3.84□□□□□ -1.79
SHR3YDL212W RPT6Q01939 405 aaKnown RBP3.84□□□□□ -1.79
SHR3YDL212W ATG29Q12092 213 aa3.84□□□□□ -1.79
SHR3YDL212W TMS1Q12116 473 aa3.84□□□□□ -1.79
SHR3YDL212W ATP10P18496 279 aa3.83□□□□□ -1.8
SHR3YDL212W RSM22P36056 628 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms