RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W PRP6P19735 899 aaPredicted RBP2.04□□□□□ -2.08
VPS8YAL002W VPS3P23643 1011 aa2.04□□□□□ -2.08
VPS8YAL002W IMG1P25626 169 aa2.04□□□□□ -2.08
VPS8YAL002W DPH5P32469 300 aaPredicted RBP2.04□□□□□ -2.08
VPS8YAL002W MRE11P32829 692 aa2.04□□□□□ -2.08
VPS8YAL002W LST4P34239 828 aa2.04□□□□□ -2.08
VPS8YAL002W YNG2P38806 282 aaKnown RBP2.04□□□□□ -2.08
VPS8YAL002W CUE3P53137 624 aaKnown RBP2.04□□□□□ -2.08
VPS8YAL002W IMO32P53219 342 aa2.04□□□□□ -2.08
VPS8YAL002W RRB1Q04225 511 aaKnown RBP2.04□□□□□ -2.08
VPS8YAL002W BOP2Q06150 570 aa2.04□□□□□ -2.08
VPS8YAL002W YLR419WQ06698 1435 aaKnown RBP2.04□□□□□ -2.08
VPS8YAL002W HBT1Q07653 1046 aaKnown RBP2.04□□□□□ -2.08
VPS8YAL002W TDH1P00360 332 aaKnown RBP2.04□□□□□ -2.08
VPS8YAL002W SOD2P00447 233 aa2.04□□□□□ -2.08
VPS8YAL002W GMH1P36125 273 aa2.04□□□□□ -2.08
VPS8YAL002W ATP3P38077 311 aaKnown RBP2.04□□□□□ -2.08
VPS8YAL002W ROT2P38138 954 aa2.04□□□□□ -2.08
VPS8YAL002W DBP8P38719 431 aa2.04□□□□□ -2.08
VPS8YAL002W TOM71P38825 639 aaKnown RBP2.04□□□□□ -2.08
VPS8YAL002W ANS1P38832 159 aa2.04□□□□□ -2.08
VPS8YAL002W PET100P38958 111 aa2.04□□□□□ -2.08
VPS8YAL002W FMP52P40008 231 aa2.04□□□□□ -2.08
VPS8YAL002W ASG1P40467 964 aa2.04□□□□□ -2.08
VPS8YAL002W ULP2P40537 1034 aaPredicted RBP2.04□□□□□ -2.08
VPS8YAL002W SMC3P47037 1230 aa2.04□□□□□ -2.08
VPS8YAL002W RRP46P53256 223 aaPredicted RBP2.04□□□□□ -2.08
VPS8YAL002W FHN1P53279 174 aa2.04□□□□□ -2.08
VPS8YAL002W YNL050CP53952 270 aa2.04□□□□□ -2.08
VPS8YAL002W GSH2Q08220 491 aa2.04□□□□□ -2.08
VPS8YAL002W PCL8Q08966 492 aa2.04□□□□□ -2.08
VPS8YAL002W ULA1Q12059 462 aa2.04□□□□□ -2.08
VPS8YAL002W AVL9Q12500 764 aa2.04□□□□□ -2.08
VPS8YAL002W ZPS1Q12512 249 aa2.04□□□□□ -2.08
VPS8YAL002W PRE10P21242 288 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
VPS8YAL002W DMC1P25453 334 aa2.03□□□□□ -2.08
VPS8YAL002W CRM1P30822 1084 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W NDI1P32340 513 aa2.03□□□□□ -2.08
VPS8YAL002W PDB1P32473 366 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W HCS1P34243 683 aa2.03□□□□□ -2.08
VPS8YAL002W SLM4P38247 162 aa2.03□□□□□ -2.08
VPS8YAL002W NTC20P38302 140 aaPredicted RBP2.03□□□□□ -2.08
VPS8YAL002W HXT14P42833 540 aa2.03□□□□□ -2.08
VPS8YAL002W ELP2P42935 788 aa2.03□□□□□ -2.08
VPS8YAL002W STR3P53101 465 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W GIM3P53900 129 aa2.03□□□□□ -2.08
VPS8YAL002W AQR1P53943 586 aa2.03□□□□□ -2.08
VPS8YAL002W YPL062WQ02781 134 aa2.03□□□□□ -2.08
VPS8YAL002W FIN1Q03898 291 aa2.03□□□□□ -2.08
VPS8YAL002W RPN9Q04062 393 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W PPM1Q04081 328 aa2.03□□□□□ -2.08
VPS8YAL002W ARR3Q06598 404 aa2.03□□□□□ -2.08
VPS8YAL002W ATG23Q06671 453 aa2.03□□□□□ -2.08
VPS8YAL002W TSR1Q07381 788 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W YFH1Q07540 174 aa2.03□□□□□ -2.08
VPS8YAL002W TEN1Q07921 160 aa2.03□□□□□ -2.08
VPS8YAL002W KRE5P22023 1365 aa2.03□□□□□ -2.08
VPS8YAL002W TRP4P07285 380 aaPredicted RBP2.03□□□□□ -2.08
VPS8YAL002W GAL7P08431 366 aa2.03□□□□□ -2.08
VPS8YAL002W CDC6P09119 513 aa2.03□□□□□ -2.08
VPS8YAL002W LRE1P25579 583 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W FAA1P30624 700 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W RRP1P35178 278 aaPredicted RBP2.03□□□□□ -2.08
VPS8YAL002W TCD2P36101 447 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W LIN1P38852 340 aaPredicted RBP2.03□□□□□ -2.08
VPS8YAL002W MLH1P38920 769 aa2.03□□□□□ -2.08
VPS8YAL002W YJL206CP39529 758 aa2.03□□□□□ -2.08
VPS8YAL002W SSO2P39926 295 aa2.03□□□□□ -2.08
VPS8YAL002W AVT1P47082 602 aa2.03□□□□□ -2.08
VPS8YAL002W TOM22P49334 152 aa2.03□□□□□ -2.08
VPS8YAL002W FMS1P50264 508 aa2.03□□□□□ -2.08
VPS8YAL002W YGL138CP53122 345 aa2.03□□□□□ -2.08
VPS8YAL002W YNL143CP53908 130 aa2.03□□□□□ -2.08
VPS8YAL002W MUK1Q02866 612 aa2.03□□□□□ -2.08
VPS8YAL002W MRPL1Q04599 285 aa2.03□□□□□ -2.08
VPS8YAL002W ADE13Q05911 482 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W ARR1Q06596 294 aa2.03□□□□□ -2.08
VPS8YAL002W BUG1Q12191 341 aa2.03□□□□□ -2.08
VPS8YAL002W HEM1P09950 548 aaPredicted RBP2.03□□□□□ -2.08
VPS8YAL002W URA4P20051 364 aa2.03□□□□□ -2.08
VPS8YAL002W AMD2P22580 549 aa2.03□□□□□ -2.08
VPS8YAL002W PET18P25362 215 aa2.03□□□□□ -2.08
VPS8YAL002W MCM4P30665 933 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W MEI5P32489 222 aa2.03□□□□□ -2.08
VPS8YAL002W YME2P32843 850 aa2.03□□□□□ -2.08
VPS8YAL002W WBP1P33767 430 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W MRPL4P36517 319 aa2.03□□□□□ -2.08
VPS8YAL002W THI2P38141 450 aa2.03□□□□□ -2.08
VPS8YAL002W MMS4P38257 691 aa2.03□□□□□ -2.08
VPS8YAL002W MNN9P39107 395 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W ALD5P40047 520 aaKnown RBP2.03□□□□□ -2.08
VPS8YAL002W YJL070CP40361 888 aa2.03□□□□□ -2.08
VPS8YAL002W LAS21P40367 830 aa2.03□□□□□ -2.08
VPS8YAL002W YLR455WQ06188 304 aa2.03□□□□□ -2.08
VPS8YAL002W YLR413WQ06689 675 aa2.03□□□□□ -2.08
VPS8YAL002W YRM1Q12340 786 aa2.03□□□□□ -2.08
VPS8YAL002W HIP1P06775 603 aa2.02□□□□□ -2.09
VPS8YAL002W PRD1P25375 712 aa2.02□□□□□ -2.09
VPS8YAL002W SPS22P25380 463 aa2.02□□□□□ -2.09
VPS8YAL002W ASF2P32448 525 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms