RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TOP2BQ02880 1626 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 C7orf72A4D263 438 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 WTIPA6NIX2 430 aaPredicted RBP4.87□□□□□ -1.63
SRP54-209ENST00000555746 USP2O75604 605 aaPredicted RBP4.87□□□□□ -1.63
SRP54-209ENST00000555746 RAPGEF3O95398 923 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 LCP1P13796 627 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 NAT1P18440 290 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 GTF2A2P52657 109 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 HK2P52789 917 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 GYS2P54840 703 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 GP2P55259 537 aaKnown RBP4.87□□□□□ -1.63
SRP54-209ENST00000555746 RTP1P59025 263 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 LAPTM5Q13571 262 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 ZNF792Q3KQV3 632 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 HSF5Q4G112 596 aaPredicted RBP4.87□□□□□ -1.63
SRP54-209ENST00000555746 TAF7LQ5H9L4 462 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 KCNT2Q6UVM3 1135 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 CEP128Q6ZU80 1094 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 CBLL1Q75N03 491 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 IFNL3Q8IZI9 196 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 LILRA2Q8N149 483 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 Q8N1Y9 231 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 FLAD1Q8NFF5 587 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.87□□□□□ -1.63
SRP54-209ENST00000555746 ZFP64Q9NPA5 681 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 INTS7Q9NVH2 962 aaKnown RBP4.87□□□□□ -1.63
SRP54-209ENST00000555746 ACSL6Q9UKU0 697 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 CTNND2Q9UQB3 1225 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 PRKAB1Q9Y478 270 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 FANCD2Q9BXW9 1451 aa4.87□□□□□ -1.63
SRP54-209ENST00000555746 URB2Q14146 1524 aaKnown RBP4.87□□□□□ -1.63
SRP54-209ENST00000555746 TSPOAP1O95153 1857 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 SCO2A0A1W2PP80 73 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 NPHS1O60500 1241 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 MSCO60682 206 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 SNX17Q15036 470 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 TM4SF20Q53R12 229 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 GALNT18Q6P9A2 607 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 LBX2Q6XYB7 198 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 ZNF662Q6ZS27 426 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 BRAPQ7Z569 592 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 ABI1Q8IZP0 508 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 DPF3Q92784 378 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 SCLYQ96I15 445 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 SLKQ9H2G2 1235 aaPredicted RBP4.86□□□□□ -1.63
SRP54-209ENST00000555746 NDOR1Q9UHB4 597 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 ADGRE2Q9UHX3 823 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 TRAF6Q9Y4K3 522 aa4.86□□□□□ -1.63
SRP54-209ENST00000555746 TIMM13Q9Y5L4 95 aaPredicted RBP4.86□□□□□ -1.63
SRP54-209ENST00000555746 ARVCFO00192 962 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 WNT9AO14904 365 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 MYO1BO43795 1136 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 EFEMP2O95967 443 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 RPL11P62913 178 aaKnown RBP4.85□□□□□ -1.63
SRP54-209ENST00000555746 LSAMPQ13449 338 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 KIZQ2M2Z5 673 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 NLRX1Q86UT6 975 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 JAMLQ86YT9 394 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 NIM1KQ8IY84 436 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 SHISA4Q96DD7 197 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 MFSD3Q96ES6 412 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 MTA3Q9BTC8 594 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 CDIP1Q9H305 208 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 RC3H2Q9HBD1 1191 aaKnown RBP4.85□□□□□ -1.63
SRP54-209ENST00000555746 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.85□□□□□ -1.63
SRP54-209ENST00000555746 MAGEC2Q9UBF1 373 aaPredicted RBP4.85□□□□□ -1.63
SRP54-209ENST00000555746 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.85□□□□□ -1.63
SRP54-209ENST00000555746 TAF6LQ9Y6J9 622 aa4.85□□□□□ -1.63
SRP54-209ENST00000555746 EIF4G3O43432 1585 aaKnown RBP4.85□□□□□ -1.63
SRP54-209ENST00000555746 TCRBV16S1A1N1A0A5B0 115 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 H7BY64 318 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 PSPNO60542 156 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 PPP1R11O60927 126 aaPredicted RBP4.84□□□□□ -1.63
SRP54-209ENST00000555746 DNAJC8O75937 253 aaPredicted RBP4.84□□□□□ -1.63
SRP54-209ENST00000555746 CRTAMO95727 393 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 RAC2P15153 192 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 SDSP20132 328 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 POU3F2P20265 443 aaPredicted RBP4.84□□□□□ -1.63
SRP54-209ENST00000555746 ERVFC1P60507 584 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 MVKQ03426 396 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 SLC14A2Q15849 920 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 TIGD5Q53EQ6 642 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 FGD2Q7Z6J4 655 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 NLRP10Q86W26 655 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 MAGEB10Q96LZ2 347 aaPredicted RBP4.84□□□□□ -1.63
SRP54-209ENST00000555746 PLCD4Q9BRC7 762 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 CRTAC1Q9NQ79 661 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 IMPACTQ9P2X3 320 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 FBXL7Q9UJT9 491 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 PCDHA2Q9Y5H9 948 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 OAS3Q9Y6K5 1087 aaKnown RBP4.84□□□□□ -1.63
SRP54-209ENST00000555746 X6R8D5 127 aa4.84□□□□□ -1.63
SRP54-209ENST00000555746 SYNJ1O43426 1573 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 A0A087X0B3 334 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 FAM83GA6ND36 823 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 ASLP04424 464 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 MSL3P1P0C860 447 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 PNLIPP16233 465 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 BCL6P41182 706 aa4.83□□□□□ -1.64
SRP54-209ENST00000555746 AFMP43652 599 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms