RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MAGEB10Q96LZ2 347 aaPredicted RBP7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 AP5S1Q9NUS5 200 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 PIM2Q9P1W9 311 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 PCDHA11Q9Y5I1 949 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 SNX11Q9Y5W9 270 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 NPFFR2Q9Y5X5 522 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 GOLGA3Q08378 1498 aa7.78□□□□□ -1.16
RNU4-39P-201ENST00000362455 TMEM265A0A087WTH1 108 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 DYRK3O43781 588 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 CRTAMO95727 393 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 LTBRP36941 435 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 HSPA2P54652 639 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 E4F1Q66K89 784 aaPredicted RBP7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 RSPO2Q6UXX9 243 aaPredicted RBP7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 TMPRSS7Q7RTY8 843 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 JAMLQ86YT9 394 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 CREG2Q8IUH2 290 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 PPM1KQ8N3J5 372 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 CDADC1Q9BWV3 514 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 ATP13A1Q9HD20 1204 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 PCDHA9Q9Y5H5 950 aa7.77□□□□□ -1.17
RNU4-39P-201ENST00000362455 PHLDB1Q86UU1 1377 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 TCRBV16S1A1N1A0A5B0 115 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 PRR19A6NJB7 356 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 FGF10O15520 208 aaPredicted RBP7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 ESR1P03372 595 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 FURINP09958 794 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 FOSL1P15407 271 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 IGFALSP35858 605 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 KCNAB2Q13303 367 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 DIO2Q92813 273 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 ZFYVE21Q9BQ24 234 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 GPR27Q9NS67 375 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 ATP8A1Q9Y2Q0 1164 aa7.76□□□□□ -1.17
RNU4-39P-201ENST00000362455 NPHP3-ACAD11A0A0J9YXS1 232 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 TMEM82A0PJX8 343 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 MSCO60682 206 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 LCP1P13796 627 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 PAMP19021 973 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 POU3F2P20265 443 aaPredicted RBP7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 NEK4P51957 841 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 GPR85P60893 370 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 GUCY1A3Q02108 690 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 TEKQ02763 1124 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 EGR3Q06889 387 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 ZPBP2Q6X784 338 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 MTDHQ86UE4 582 aaKnown RBP7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 IFNL3Q8IZI9 196 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 PTCHD1Q96NR3 888 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 MMP19Q99542 508 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 PCDHA8Q9Y5H6 950 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 LMTK3Q96Q04 1460 aa7.75□□□□□ -1.17
RNU4-39P-201ENST00000362455 KIF21BO75037 1637 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 JMJD7P0C870 316 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 ENDOUP21128 410 aaKnown RBP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 CDKN1CP49918 316 aaPredicted RBP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 NFKB2Q00653 900 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 PCBP1Q15365 356 aaKnown RBP eCLIP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 IQCEQ6IPM2 695 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 PKN3Q6P5Z2 889 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 DDX42Q86XP3 938 aaKnown RBP eCLIP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 AHI1Q8N157 1196 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 AFAP1L2Q8N4X5 818 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 NAT16Q8N8M0 369 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 PRPF38AQ8NAV1 312 aaKnown RBP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 LEO1Q8WVC0 666 aaPredicted RBP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 HRASLS5Q96KN8 279 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 SEMA6BQ9H3T3 888 aa7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 DDX56Q9NY93 547 aaKnown RBP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 ARID4BQ4LE39 1312 aaPredicted RBP7.74□□□□□ -1.17
RNU4-39P-201ENST00000362455 CFAP43Q8NDM7 1665 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 TRBV23OR9-2A0A075B6M9 112 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 KPNA6O60684 536 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 NAT1P18440 290 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 RPL10P27635 214 aaKnown RBP7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 FLT3P36888 993 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 INF2Q27J81 1249 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 MBLAC2Q68D91 279 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 LBX2Q6XYB7 198 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 WAPLQ7Z5K2 1190 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 STRA8Q7Z7C7 330 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 RCBTB1Q8NDN9 531 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 STAG1Q8WVM7 1258 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 MTFR1LQ9H019 292 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 NUP153P49790 1475 aaKnown RBP7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 NEO1Q92859 1461 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 ADAMTSL3P82987 1691 aa7.73□□□□□ -1.17
RNU4-39P-201ENST00000362455 B4E1Z4 1266 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 ARVCFO00192 962 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 TGFB1P01137 390 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 APPP05067 770 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 EVA1CP58658 441 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 LAPTM5Q13571 262 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 AOC3Q16853 763 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 CFAP100Q494V2 611 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 ZCCHC8Q6NZY4 707 aaKnown RBP7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 ABHD17CQ6PCB6 329 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms