RNA–Protein interactions for RNA: tA(AGC)J

tA(AGC)J, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)J, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)JtA(AGC)J PPH3P32345 308 aa11.77□□□□□ -0.53
tA(AGC)JtA(AGC)J PRP45P28004 379 aaPredicted RBP11.74□□□□□ -0.53
tA(AGC)JtA(AGC)J IMH1Q06704 911 aaKnown RBP11.74□□□□□ -0.53
tA(AGC)JtA(AGC)J RRP5Q05022 1729 aaKnown RBP11.74□□□□□ -0.53
tA(AGC)JtA(AGC)J YMR074CQ04773 145 aa11.73□□□□□ -0.53
tA(AGC)JtA(AGC)J SPE2P21182 396 aa11.68□□□□□ -0.54
tA(AGC)JtA(AGC)J PRP5P21372 849 aaPredicted RBP11.67□□□□□ -0.54
tA(AGC)JtA(AGC)J KIP3P53086 805 aaKnown RBP11.67□□□□□ -0.54
tA(AGC)JtA(AGC)J PSK1P31374 1356 aa11.65□□□□□ -0.55
tA(AGC)JtA(AGC)J TY4B-HP0C2J7 1802 aa11.65□□□□□ -0.55
tA(AGC)JtA(AGC)J TY4B-JP47024 1803 aa11.65□□□□□ -0.55
tA(AGC)JtA(AGC)J YRF1-2P40105 1681 aa11.64□□□□□ -0.55
tA(AGC)JtA(AGC)J ADE6P38972 1358 aaKnown RBP11.64□□□□□ -0.55
tA(AGC)JtA(AGC)J PRI1P10363 409 aa11.63□□□□□ -0.55
tA(AGC)JtA(AGC)J MSB3P48566 633 aaPredicted RBP11.61□□□□□ -0.55
tA(AGC)JtA(AGC)J ORC1P54784 914 aaPredicted RBP11.6□□□□□ -0.55
tA(AGC)JtA(AGC)J BUD31P25337 157 aaPredicted RBP11.59□□□□□ -0.55
tA(AGC)JtA(AGC)J CHZ1P40019 153 aaPredicted RBP11.58□□□□□ -0.56
tA(AGC)JtA(AGC)J LEU3P08638 886 aa11.55□□□□□ -0.56
tA(AGC)JtA(AGC)J YLR419WQ06698 1435 aaKnown RBP11.54□□□□□ -0.56
tA(AGC)JtA(AGC)J LEU2P04173 364 aaPredicted RBP11.54□□□□□ -0.56
tA(AGC)JtA(AGC)J CSE4P36012 229 aa11.54□□□□□ -0.56
tA(AGC)JtA(AGC)J IES2P40154 320 aa11.54□□□□□ -0.56
tA(AGC)JtA(AGC)J PRP43P53131 767 aaKnown RBP11.54□□□□□ -0.56
tA(AGC)JtA(AGC)J RPS24AP0CX31 135 aaKnown RBP11.53□□□□□ -0.56
tA(AGC)JtA(AGC)J RPS24BP0CX32 135 aaKnown RBP11.53□□□□□ -0.56
tA(AGC)JtA(AGC)J TCB1Q12466 1186 aa11.53□□□□□ -0.56
tA(AGC)JtA(AGC)J DOT5P40553 215 aa11.52□□□□□ -0.57
tA(AGC)JtA(AGC)J MTR4P47047 1073 aaKnown RBP11.52□□□□□ -0.57
tA(AGC)JtA(AGC)J SLM3Q12093 417 aa11.52□□□□□ -0.57
tA(AGC)JtA(AGC)J URB1P34241 1764 aaKnown RBP11.51□□□□□ -0.57
tA(AGC)JtA(AGC)J RPN11P43588 306 aaKnown RBP11.5□□□□□ -0.57
tA(AGC)JtA(AGC)J RSF2P46974 1380 aa11.48□□□□□ -0.57
tA(AGC)JtA(AGC)J YML133CQ03099 1374 aa11.47□□□□□ -0.57
tA(AGC)JtA(AGC)J YLL067CQ07888 1374 aa11.47□□□□□ -0.57
tA(AGC)JtA(AGC)J YLL066CQ99208 1374 aa11.47□□□□□ -0.57
tA(AGC)JtA(AGC)J FOX2Q02207 900 aaKnown RBP11.46□□□□□ -0.57
tA(AGC)JtA(AGC)J UBP1P25037 809 aa11.45□□□□□ -0.58
tA(AGC)JtA(AGC)J ROM2P51862 1356 aaKnown RBP11.43□□□□□ -0.58
tA(AGC)JtA(AGC)J YRF1-3P0CX14 1859 aa11.42□□□□□ -0.58
tA(AGC)JtA(AGC)J YRF1-7P0CX15 1859 aa11.42□□□□□ -0.58
tA(AGC)JtA(AGC)J YRF1-6P53819 1859 aa11.42□□□□□ -0.58
tA(AGC)JtA(AGC)J FKS3Q04952 1785 aa11.42□□□□□ -0.58
tA(AGC)JtA(AGC)J NPR2P39923 615 aa11.42□□□□□ -0.58
tA(AGC)JtA(AGC)J XKS1P42826 600 aa11.42□□□□□ -0.58
tA(AGC)JtA(AGC)J YKL133CP36066 463 aa11.4□□□□□ -0.58
tA(AGC)JtA(AGC)J YIL177CP40434 1758 aa11.4□□□□□ -0.58
tA(AGC)JtA(AGC)J YJL225CP40889 1758 aa11.4□□□□□ -0.58
tA(AGC)JtA(AGC)J YEF3P16521 1044 aaKnown RBP11.39□□□□□ -0.59
tA(AGC)JtA(AGC)J SCT1P32784 759 aa11.39□□□□□ -0.59
tA(AGC)JtA(AGC)J YBL086CP38177 466 aa11.39□□□□□ -0.59
tA(AGC)JtA(AGC)J ENP1P38333 483 aaKnown RBP11.39□□□□□ -0.59
tA(AGC)JtA(AGC)J FKH1P40466 484 aa11.39□□□□□ -0.59
tA(AGC)JtA(AGC)J LYS4P49367 693 aaPredicted RBP11.39□□□□□ -0.59
tA(AGC)JtA(AGC)J YJL181WP46987 611 aa11.37□□□□□ -0.59
tA(AGC)JtA(AGC)J COBP00163 385 aa11.36□□□□□ -0.59
tA(AGC)JtA(AGC)J GAS4Q08271 471 aa11.36□□□□□ -0.59
tA(AGC)JtA(AGC)J DPS1P04802 557 aaKnown RBP11.35□□□□□ -0.59
tA(AGC)JtA(AGC)J EDE1P34216 1381 aa11.34□□□□□ -0.59
tA(AGC)JtA(AGC)J RTG3P38165 486 aa11.34□□□□□ -0.59
tA(AGC)JtA(AGC)J LAM6Q08001 693 aa11.34□□□□□ -0.59
tA(AGC)JtA(AGC)J APC1P53886 1748 aa11.34□□□□□ -0.59
tA(AGC)JtA(AGC)J YKR075CP36155 307 aa11.33□□□□□ -0.6
tA(AGC)JtA(AGC)J PRP40P33203 583 aaKnown RBP11.32□□□□□ -0.6
tA(AGC)JtA(AGC)J UGA2P38067 497 aa11.32□□□□□ -0.6
tA(AGC)JtA(AGC)J YRF1-4O13559 1382 aa11.31□□□□□ -0.6
tA(AGC)JtA(AGC)J GTT3P39996 337 aa11.31□□□□□ -0.6
tA(AGC)JtA(AGC)J PDI1P17967 522 aaKnown RBP11.3□□□□□ -0.6
tA(AGC)JtA(AGC)J RTF1P53064 558 aa11.3□□□□□ -0.6
tA(AGC)JtA(AGC)J RCR1P38212 213 aa11.29□□□□□ -0.6
tA(AGC)JtA(AGC)J ALD2P47771 506 aa11.29□□□□□ -0.6
tA(AGC)JtA(AGC)J CTH1P47976 325 aa11.29□□□□□ -0.6
tA(AGC)JtA(AGC)J MLP1Q02455 1875 aaKnown RBP11.28□□□□□ -0.6
tA(AGC)JtA(AGC)J SSA2P10592 639 aaKnown RBP11.28□□□□□ -0.6
tA(AGC)JtA(AGC)J FRK1Q03002 865 aaPredicted RBP11.27□□□□□ -0.61
tA(AGC)JtA(AGC)J AUS1Q08409 1394 aa11.27□□□□□ -0.61
tA(AGC)JtA(AGC)J ADE16P54113 591 aaKnown RBP11.25□□□□□ -0.61
tA(AGC)JtA(AGC)J MEC3Q02574 474 aa11.25□□□□□ -0.61
tA(AGC)JtA(AGC)J TAP42Q04372 366 aa11.25□□□□□ -0.61
tA(AGC)JtA(AGC)J HIM1Q06674 414 aa11.25□□□□□ -0.61
tA(AGC)JtA(AGC)J SIR4P11978 1358 aa11.24□□□□□ -0.61
tA(AGC)JtA(AGC)J GRX4P32642 244 aa11.23□□□□□ -0.61
tA(AGC)JtA(AGC)J SNF2P22082 1703 aa11.21□□□□□ -0.61
tA(AGC)JtA(AGC)J SEC3P33332 1336 aaKnown RBP11.21□□□□□ -0.61
tA(AGC)JtA(AGC)J PDS5Q04264 1277 aa11.21□□□□□ -0.61
tA(AGC)JtA(AGC)J RPO41P13433 1351 aaKnown RBP11.19□□□□□ -0.62
tA(AGC)JtA(AGC)J POL5P39985 1022 aaKnown RBP11.19□□□□□ -0.62
tA(AGC)JtA(AGC)J MHP1P43638 1398 aa11.18□□□□□ -0.62
tA(AGC)JtA(AGC)J ATG13Q06628 738 aa11.17□□□□□ -0.62
tA(AGC)JtA(AGC)J MSB4Q12317 492 aa11.16□□□□□ -0.62
tA(AGC)JtA(AGC)J OSM1P21375 501 aaKnown RBP11.14□□□□□ -0.63
tA(AGC)JtA(AGC)J BDF1P35817 686 aa11.14□□□□□ -0.63
tA(AGC)JtA(AGC)J INP54Q08227 384 aaKnown RBP11.14□□□□□ -0.63
tA(AGC)JtA(AGC)J SPT7P35177 1332 aa11.13□□□□□ -0.63
tA(AGC)JtA(AGC)J KAR2P16474 682 aaKnown RBP11.13□□□□□ -0.63
tA(AGC)JtA(AGC)J RPG1P38249 964 aaKnown RBP11.13□□□□□ -0.63
tA(AGC)JtA(AGC)J BUB1P41695 1021 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
tA(AGC)JtA(AGC)J SSA1P10591 642 aaKnown RBP11.11□□□□□ -0.63
tA(AGC)JtA(AGC)J ALD3P54114 506 aa11.11□□□□□ -0.63
tA(AGC)JtA(AGC)J GRE2Q12068 342 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms