RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17bsnR17b YOR093CQ12275 1648 aa5.96□□□□□ -1.45
snR17bsnR17b YEF3P16521 1044 aaKnown RBP5.96□□□□□ -1.46
snR17bsnR17b VPS24P36095 224 aaKnown RBP5.96□□□□□ -1.46
snR17bsnR17b NTE1Q04958 1679 aa5.95□□□□□ -1.46
snR17bsnR17b RAD2P07276 1031 aa5.95□□□□□ -1.46
snR17bsnR17b SIS2P36024 562 aa5.95□□□□□ -1.46
snR17bsnR17b BNR1P40450 1375 aa5.94□□□□□ -1.46
snR17bsnR17b MSP1P28737 362 aa5.94□□□□□ -1.46
snR17bsnR17b FKH1P40466 484 aa5.94□□□□□ -1.46
snR17bsnR17b DAL5P15365 543 aa5.92□□□□□ -1.46
snR17bsnR17b ARL1P38116 183 aaKnown RBP5.92□□□□□ -1.46
snR17bsnR17b SAP155P43612 1002 aa5.92□□□□□ -1.46
snR17bsnR17b RPA190P10964 1664 aaKnown RBP5.91□□□□□ -1.46
snR17bsnR17b SPO14P36126 1683 aa5.91□□□□□ -1.46
snR17bsnR17b NOT3P06102 836 aaKnown RBP5.91□□□□□ -1.46
snR17bsnR17b CHZ1P40019 153 aaPredicted RBP5.91□□□□□ -1.46
snR17bsnR17b RTR1P40084 226 aaPredicted RBP5.91□□□□□ -1.46
snR17bsnR17b YIL092WP40497 633 aa5.91□□□□□ -1.46
snR17bsnR17b POL32P47110 350 aa5.91□□□□□ -1.46
snR17bsnR17b CTR9P89105 1077 aa5.91□□□□□ -1.46
snR17bsnR17b DNF2Q12675 1612 aa5.91□□□□□ -1.46
snR17bsnR17b KNS1P32350 737 aaPredicted RBP5.9□□□□□ -1.46
snR17bsnR17b YAP3P38749 330 aa5.9□□□□□ -1.46
snR17bsnR17b RRP46P53256 223 aaPredicted RBP5.9□□□□□ -1.46
snR17bsnR17b LSP1Q12230 341 aaKnown RBP5.9□□□□□ -1.46
snR17bsnR17b EDE1P34216 1381 aa5.9□□□□□ -1.47
snR17bsnR17b TPD3P31383 635 aa5.89□□□□□ -1.47
snR17bsnR17b BUD27P43573 796 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
snR17bsnR17b TAF8Q03750 510 aa5.89□□□□□ -1.47
snR17bsnR17b RLF2Q12495 606 aa5.89□□□□□ -1.47
snR17bsnR17b YPP1P46951 817 aa5.88□□□□□ -1.47
snR17bsnR17b ISW2Q08773 1120 aa5.88□□□□□ -1.47
snR17bsnR17b AIM44Q99299 758 aa5.88□□□□□ -1.47
snR17bsnR17b VMR1P38735 1592 aa5.88□□□□□ -1.47
snR17bsnR17b QCR6P00127 147 aa5.87□□□□□ -1.47
snR17bsnR17b TEA1P47988 759 aa5.87□□□□□ -1.47
snR17bsnR17b THI22Q06490 572 aa5.87□□□□□ -1.47
snR17bsnR17b TRM3Q07527 1436 aa5.87□□□□□ -1.47
snR17bsnR17b CHC1P22137 1653 aaKnown RBP5.86□□□□□ -1.47
snR17bsnR17b DOP1Q03921 1698 aa5.86□□□□□ -1.47
snR17bsnR17b KRE5P22023 1365 aa5.86□□□□□ -1.47
snR17bsnR17b PUF6Q04373 656 aaKnown RBP5.86□□□□□ -1.47
snR17bsnR17b NOP58Q12499 511 aaKnown RBP5.86□□□□□ -1.47
snR17bsnR17b CSE4P36012 229 aa5.85□□□□□ -1.47
snR17bsnR17b HEF3P53978 1044 aaKnown RBP5.85□□□□□ -1.47
snR17bsnR17b NUP192P47054 1683 aa5.85□□□□□ -1.47
snR17bsnR17b ITC1P53125 1264 aa5.84□□□□□ -1.47
snR17bsnR17b IML1P47170 1584 aa5.84□□□□□ -1.48
snR17bsnR17b NAP1P25293 417 aaKnown RBP5.83□□□□□ -1.48
snR17bsnR17b PRD1P25375 712 aa5.83□□□□□ -1.48
snR17bsnR17b YML133CQ03099 1374 aa5.82□□□□□ -1.48
snR17bsnR17b YLL067CQ07888 1374 aa5.82□□□□□ -1.48
snR17bsnR17b YLL066CQ99208 1374 aa5.82□□□□□ -1.48
snR17bsnR17b RAD9P14737 1309 aa5.82□□□□□ -1.48
snR17bsnR17b ALD4P46367 519 aaKnown RBP5.82□□□□□ -1.48
snR17bsnR17b RTT109Q07794 436 aa5.82□□□□□ -1.48
snR17bsnR17b HAP1P0CE41 1502 aa5.82□□□□□ -1.48
snR17bsnR17b SRS2P12954 1174 aa5.81□□□□□ -1.48
snR17bsnR17b KAR2P16474 682 aaKnown RBP5.81□□□□□ -1.48
snR17bsnR17b RPG1P38249 964 aaKnown RBP5.81□□□□□ -1.48
snR17bsnR17b RSC1P53236 928 aa5.81□□□□□ -1.48
snR17bsnR17b HAP5Q02516 242 aa5.81□□□□□ -1.48
snR17bsnR17b LCD1Q04377 747 aa5.81□□□□□ -1.48
snR17bsnR17b COG8Q04632 607 aa5.81□□□□□ -1.48
snR17bsnR17b MAK21Q12176 1025 aaKnown RBP5.81□□□□□ -1.48
snR17bsnR17b MET5P47169 1442 aa5.81□□□□□ -1.48
snR17bsnR17b SNF2P22082 1703 aa5.8□□□□□ -1.48
snR17bsnR17b SIR4P11978 1358 aa5.8□□□□□ -1.48
snR17bsnR17b TYS1P36421 394 aaKnown RBP5.79□□□□□ -1.48
snR17bsnR17b YGR130CP53278 816 aa5.79□□□□□ -1.48
snR17bsnR17b PAP2P53632 584 aaKnown RBP5.79□□□□□ -1.48
snR17bsnR17b NUP145P49687 1317 aa5.78□□□□□ -1.48
snR17bsnR17b TRP5P00931 707 aaKnown RBP5.78□□□□□ -1.48
snR17bsnR17b CAB1Q04430 367 aa5.78□□□□□ -1.48
snR17bsnR17b BCK1Q01389 1478 aa5.77□□□□□ -1.49
snR17bsnR17b SEC7P11075 2009 aaKnown RBP5.77□□□□□ -1.49
snR17bsnR17b DLD1P32891 587 aa5.77□□□□□ -1.49
snR17bsnR17b RKM3P38222 552 aa5.77□□□□□ -1.49
snR17bsnR17b RRT14P40470 206 aa5.77□□□□□ -1.49
snR17bsnR17b PIL1P53252 339 aaKnown RBP5.77□□□□□ -1.49
snR17bsnR17b MDG1P53885 366 aa5.77□□□□□ -1.49
snR17bsnR17b HIM1Q06674 414 aa5.77□□□□□ -1.49
snR17bsnR17b YRF1-1P0CX20 1796 aa5.77□□□□□ -1.49
snR17bsnR17b YRF1-5P0CX21 1796 aa5.77□□□□□ -1.49
snR17bsnR17b YRF1-8P0CX22 1796 aa5.77□□□□□ -1.49
snR17bsnR17b YRF1-4O13559 1382 aa5.77□□□□□ -1.49
snR17bsnR17b NUP188P52593 1655 aaKnown RBP5.76□□□□□ -1.49
snR17bsnR17b MCM2P29469 868 aa5.76□□□□□ -1.49
snR17bsnR17b ILV3P39522 585 aaKnown RBP5.76□□□□□ -1.49
snR17bsnR17b TPM2P40414 161 aa5.76□□□□□ -1.49
snR17bsnR17b ECM16Q04217 1267 aaKnown RBP5.76□□□□□ -1.49
snR17bsnR17b NKP2Q06162 153 aa5.76□□□□□ -1.49
snR17bsnR17b TSR3Q12094 313 aaKnown RBP5.76□□□□□ -1.49
snR17bsnR17b AVT3P36062 692 aa5.75□□□□□ -1.49
snR17bsnR17b BDH2P39713 417 aa5.75□□□□□ -1.49
snR17bsnR17b CIR1P42940 261 aa5.75□□□□□ -1.49
snR17bsnR17b NPA3P47122 385 aa5.75□□□□□ -1.49
snR17bsnR17b YGL081WP53156 320 aa5.75□□□□□ -1.49
snR17bsnR17b GCR2Q01722 534 aa5.75□□□□□ -1.49
snR17bsnR17b TAP42Q04372 366 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms