RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeastyeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDB1YPR184W PRI1P10363 409 aa6.06□□□□□ -1.44
GDB1YPR184W MDG1P53885 366 aa6.06□□□□□ -1.44
GDB1YPR184W LEU2P04173 364 aaPredicted RBP6.06□□□□□ -1.44
GDB1YPR184W SRB8P25648 1427 aa6.05□□□□□ -1.44
GDB1YPR184W ESC2Q06340 456 aa6.05□□□□□ -1.44
GDB1YPR184W DPS1P04802 557 aaKnown RBP6.04□□□□□ -1.44
GDB1YPR184W EBP2P36049 427 aaKnown RBP6.04□□□□□ -1.44
GDB1YPR184W YRB30P53107 440 aaPredicted RBP6.04□□□□□ -1.44
GDB1YPR184W IRC3Q06683 689 aa6.03□□□□□ -1.44
GDB1YPR184W RRI2Q12348 645 aa6.03□□□□□ -1.44
GDB1YPR184W AOS1Q06624 347 aa6.03□□□□□ -1.44
GDB1YPR184W MTR4P47047 1073 aaKnown RBP6.03□□□□□ -1.44
GDB1YPR184W NUP159P40477 1460 aa6.02□□□□□ -1.45
GDB1YPR184W TY1B-NL2Q99337 1749 aaKnown RBP6.02□□□□□ -1.45
GDB1YPR184W CAT8P39113 1433 aa6.02□□□□□ -1.45
GDB1YPR184W ARP5P53946 755 aa6.02□□□□□ -1.45
GDB1YPR184W MAK10Q02197 733 aa6.02□□□□□ -1.45
GDB1YPR184W SNU66Q12420 587 aaPredicted RBP6.02□□□□□ -1.45
GDB1YPR184W SSM4P40318 1319 aa6.02□□□□□ -1.45
GDB1YPR184W PEX14P53112 341 aa6.01□□□□□ -1.45
GDB1YPR184W LTE1P07866 1435 aa6.01□□□□□ -1.45
GDB1YPR184W DUR1,2P32528 1835 aaKnown RBP6.01□□□□□ -1.45
GDB1YPR184W KEX1P09620 729 aa6.01□□□□□ -1.45
GDB1YPR184W CAB1Q04430 367 aa6□□□□□ -1.45
GDB1YPR184W NOP53Q12080 455 aaKnown RBP6□□□□□ -1.45
GDB1YPR184W NBL1Q3E7Y6 73 aa6□□□□□ -1.45
GDB1YPR184W PWP2P25635 923 aaKnown RBP6□□□□□ -1.45
GDB1YPR184W SEC20P28791 383 aa6□□□□□ -1.45
GDB1YPR184W ETT1Q08421 412 aaKnown RBP6□□□□□ -1.45
GDB1YPR184W MHP1P43638 1398 aa6□□□□□ -1.45
GDB1YPR184W PRP45P28004 379 aaPredicted RBP6□□□□□ -1.45
GDB1YPR184W VPS27P40343 622 aaKnown RBP6□□□□□ -1.45
GDB1YPR184W ESF1Q06344 628 aaKnown RBP6□□□□□ -1.45
GDB1YPR184W CFT1Q06632 1357 aaKnown RBP6□□□□□ -1.45
GDB1YPR184W GEA1P47102 1408 aaPredicted RBP6□□□□□ -1.45
GDB1YPR184W SNT2P53127 1403 aa6□□□□□ -1.45
GDB1YPR184W UGA2P38067 497 aa6□□□□□ -1.45
GDB1YPR184W TCB1Q12466 1186 aa6□□□□□ -1.45
GDB1YPR184W RAD26P40352 1085 aa5.99□□□□□ -1.45
GDB1YPR184W YBP2P53169 641 aa5.99□□□□□ -1.45
GDB1YPR184W IPL1P38991 367 aa5.99□□□□□ -1.45
GDB1YPR184W ALD3P54114 506 aa5.99□□□□□ -1.45
GDB1YPR184W YDL144CQ07589 356 aa5.99□□□□□ -1.45
GDB1YPR184W YOR093CQ12275 1648 aa5.99□□□□□ -1.45
GDB1YPR184W CDC25P04821 1589 aa5.99□□□□□ -1.45
GDB1YPR184W ARO1P08566 1588 aaKnown RBP5.98□□□□□ -1.45
GDB1YPR184W ZDS1P50111 915 aaKnown RBP5.98□□□□□ -1.45
GDB1YPR184W SAP155P43612 1002 aa5.98□□□□□ -1.45
GDB1YPR184W TSC11P40061 1430 aa5.98□□□□□ -1.45
GDB1YPR184W NMD2P38798 1089 aaKnown RBP5.98□□□□□ -1.45
GDB1YPR184W YEF3P16521 1044 aaKnown RBP5.97□□□□□ -1.45
GDB1YPR184W HSP104P31539 908 aaKnown RBP5.97□□□□□ -1.45
GDB1YPR184W VPS64Q03944 604 aa5.97□□□□□ -1.45
GDB1YPR184W FPR4Q06205 392 aaPredicted RBP5.97□□□□□ -1.45
GDB1YPR184W AIM44Q99299 758 aa5.97□□□□□ -1.45
GDB1YPR184W CHC1P22137 1653 aaKnown RBP5.97□□□□□ -1.45
GDB1YPR184W DNF1P32660 1571 aa5.97□□□□□ -1.45
GDB1YPR184W GAS4Q08271 471 aa5.97□□□□□ -1.45
GDB1YPR184W AIM7Q12156 149 aa5.97□□□□□ -1.45
GDB1YPR184W SPT7P35177 1332 aa5.97□□□□□ -1.45
GDB1YPR184W SMC1P32908 1225 aa5.97□□□□□ -1.45
GDB1YPR184W YBR287WP38355 427 aa5.97□□□□□ -1.45
GDB1YPR184W GDB1Q06625 1536 aa5.96□□□□□ -1.45
GDB1YPR184W FUN12P39730 1002 aaKnown RBP5.96□□□□□ -1.45
GDB1YPR184W YIL177CP40434 1758 aa5.96□□□□□ -1.46
GDB1YPR184W YJL225CP40889 1758 aa5.96□□□□□ -1.46
GDB1YPR184W RPP0P05317 312 aaKnown RBP5.96□□□□□ -1.46
GDB1YPR184W SMC3P47037 1230 aa5.96□□□□□ -1.46
GDB1YPR184W DNF2Q12675 1612 aa5.96□□□□□ -1.46
GDB1YPR184W ALD4P46367 519 aaKnown RBP5.95□□□□□ -1.46
GDB1YPR184W MAM1P40065 302 aa5.95□□□□□ -1.46
GDB1YPR184W RMT2Q03305 412 aa5.94□□□□□ -1.46
GDB1YPR184W RAD9P14737 1309 aa5.94□□□□□ -1.46
GDB1YPR184W VMR1P38735 1592 aa5.94□□□□□ -1.46
GDB1YPR184W VPS15P22219 1454 aa5.94□□□□□ -1.46
GDB1YPR184W YFR006WP43590 535 aa5.94□□□□□ -1.46
GDB1YPR184W RCM1P53972 490 aa5.93□□□□□ -1.46
GDB1YPR184W ALD2P47771 506 aa5.93□□□□□ -1.46
GDB1YPR184W SLN1P39928 1220 aaPredicted RBP5.93□□□□□ -1.46
GDB1YPR184W RIX7Q07844 837 aaKnown RBP5.92□□□□□ -1.46
GDB1YPR184W DNF3Q12674 1656 aa5.92□□□□□ -1.46
GDB1YPR184W QCR6P00127 147 aa5.92□□□□□ -1.46
GDB1YPR184W SWI6P09959 803 aa5.92□□□□□ -1.46
GDB1YPR184W PRP5P21372 849 aaPredicted RBP5.92□□□□□ -1.46
GDB1YPR184W MRD1Q06106 887 aaKnown RBP5.91□□□□□ -1.46
GDB1YPR184W DIB1Q06819 143 aaPredicted RBP5.91□□□□□ -1.46
GDB1YPR184W TY3B-IQ7LHG5 1498 aaKnown RBP5.91□□□□□ -1.46
GDB1YPR184W UGA3P26370 528 aa5.91□□□□□ -1.46
GDB1YPR184W SGM1P47166 707 aa5.91□□□□□ -1.46
GDB1YPR184W CTF4Q01454 927 aa5.91□□□□□ -1.46
GDB1YPR184W JIP3O13555 125 aa5.9□□□□□ -1.46
GDB1YPR184W TRM3Q07527 1436 aa5.9□□□□□ -1.46
GDB1YPR184W NAB3P38996 802 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46not detected
GDB1YPR184W GYP7P48365 746 aa5.9□□□□□ -1.46
GDB1YPR184W SRC1Q03707 834 aa5.9□□□□□ -1.46
GDB1YPR184W STM1P39015 273 aaKnown RBP5.9□□□□□ -1.47
GDB1YPR184W RLF2Q12495 606 aa5.9□□□□□ -1.47
GDB1YPR184W AVT3P36062 692 aa5.9□□□□□ -1.47
GDB1YPR184W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.9□□□□□ -1.47not detected
GDB1YPR184W ITT1Q04638 464 aa5.9□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms