RNA–Protein interactions for RNA: YPL105C

SYH1, Transcript of Protein of unknown function that influences nuclear pore distribution, yeast

Gene SYH1, Length 2,550 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYH1	YPL105C	SCJ1	P25303	377 aa		2.78	□□□□□ -1.96
SYH1	YPL105C	SPT5	P27692	1063 aa	Known RBP	2.78	□□□□□ -1.96
SYH1	YPL105C	TGL4	P36165	910 aa		2.78	□□□□□ -1.96
SYH1	YPL105C	IRC20	Q06554	1556 aa		2.78	□□□□□ -1.96
SYH1	YPL105C	WSC3	Q12215	556 aa		2.78	□□□□□ -1.96
SYH1	YPL105C	GAP1	P19145	602 aa	Predicted RBP	2.77	□□□□□ -1.97
SYH1	YPL105C	YDJ1	P25491	409 aa	Known RBP	2.77	□□□□□ -1.97
SYH1	YPL105C	YJU3	P28321	313 aa		2.77	□□□□□ -1.97
SYH1	YPL105C	RIM21	P48565	533 aa		2.77	□□□□□ -1.97
SYH1	YPL105C	GYP5	Q12344	894 aa		2.77	□□□□□ -1.97
SYH1	YPL105C	ARG8	P18544	423 aa		2.77	□□□□□ -1.97
SYH1	YPL105C	SIT4	P20604	311 aa		2.77	□□□□□ -1.97
SYH1	YPL105C	STM1	P39015	273 aa	Known RBP	2.77	□□□□□ -1.97
SYH1	YPL105C	YOL036W	Q08206	761 aa		2.77	□□□□□ -1.97
SYH1	YPL105C	AIR2	Q12476	344 aa	Known RBP	2.77	□□□□□ -1.97
SYH1	YPL105C	MDS3	P53094	1487 aa		2.76	□□□□□ -1.97
SYH1	YPL105C	ASF1	P32447	279 aa		2.76	□□□□□ -1.97
SYH1	YPL105C	YPR109W	Q06104	294 aa		2.76	□□□□□ -1.97
SYH1	YPL105C	YTA7	P40340	1379 aa		2.76	□□□□□ -1.97
SYH1	YPL105C	MAK16	P10962	306 aa	Predicted RBP	2.76	□□□□□ -1.97
SYH1	YPL105C	IPL1	P38991	367 aa		2.76	□□□□□ -1.97
SYH1	YPL105C	ITT1	Q04638	464 aa		2.76	□□□□□ -1.97
SYH1	YPL105C	CSC1	Q06538	782 aa		2.76	□□□□□ -1.97
SYH1	YPL105C	SEC20	P28791	383 aa		2.75	□□□□□ -1.97
SYH1	YPL105C	RSC30	P38781	883 aa		2.75	□□□□□ -1.97
SYH1	YPL105C	ILV3	P39522	585 aa	Known RBP	2.75	□□□□□ -1.97
SYH1	YPL105C	SET4	P42948	560 aa		2.75	□□□□□ -1.97
SYH1	YPL105C	DAN4	P47179	1161 aa		2.75	□□□□□ -1.97
SYH1	YPL105C	YBL113C	Q7M4S9	792 aa		2.75	□□□□□ -1.97
SYH1	YPL105C	MYO2	P19524	1574 aa	Known RBP	2.75	□□□□□ -1.97
SYH1	YPL105C	AI4	P03878	556 aa		2.75	□□□□□ -1.97
SYH1	YPL105C	MPH3	P0CE00	602 aa		2.75	□□□□□ -1.97
SYH1	YPL105C	PEP12	P32854	288 aa		2.75	□□□□□ -1.97
SYH1	YPL105C	UBP9	P39967	754 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	FKH1	P40466	484 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	RPP1B	P10622	106 aa	Known RBP	2.74	□□□□□ -1.97
SYH1	YPL105C	DCW1	P36091	449 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	OCA5	P38738	679 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	ERP5	P38819	212 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	YPP1	P46951	817 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	ALD2	P47771	506 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	ECM23	Q02710	187 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	LAM6	Q08001	693 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	MSC6	Q08818	692 aa	Known RBP	2.74	□□□□□ -1.97
SYH1	YPL105C	LDB19	Q12502	818 aa		2.74	□□□□□ -1.97
SYH1	YPL105C	LTE1	P07866	1435 aa		2.73	□□□□□ -1.97
SYH1	YPL105C	TRP5	P00931	707 aa	Known RBP	2.73	□□□□□ -1.97
SYH1	YPL105C	RDS2	P19541	446 aa	Known RBP	2.73	□□□□□ -1.97
SYH1	YPL105C	TIF11	P38912	153 aa	Known RBP	2.73	□□□□□ -1.97
SYH1	YPL105C	RRP15	Q06511	250 aa	Predicted RBP	2.73	□□□□□ -1.97
SYH1	YPL105C	TFB4	Q12004	338 aa		2.73	□□□□□ -1.97
SYH1	YPL105C	SLI15	P38283	698 aa		2.73	□□□□□ -1.97
SYH1	YPL105C	NAF1	P53919	492 aa	Known RBP	2.73	□□□□□ -1.97
SYH1	YPL105C	SPP1	Q03012	353 aa		2.73	□□□□□ -1.97
SYH1	YPL105C	SLY41	P22215	453 aa		2.72	□□□□□ -1.97
SYH1	YPL105C	KTR7	P40504	517 aa		2.72	□□□□□ -1.97
SYH1	YPL105C	TRL1	P09880	827 aa	Known RBP	2.72	□□□□□ -1.97
SYH1	YPL105C	BRN1	P38170	754 aa		2.72	□□□□□ -1.97
SYH1	YPL105C	MCM16	Q12262	181 aa		2.72	□□□□□ -1.97
SYH1	YPL105C	HTA1	P04911	132 aa	Known RBP	2.71	□□□□□ -1.98
SYH1	YPL105C	HTA2	P04912	132 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	GAL2	P13181	574 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	ATE1	P16639	503 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	SIS1	P25294	352 aa	Known RBP	2.71	□□□□□ -1.98
SYH1	YPL105C	UBX7	P38349	436 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	YHL050C	P38721	697 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	YHR219W	P38900	624 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	POL32	P47110	350 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	CDC73	Q06697	393 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	YEL077C	Q3E7X8	1277 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	TY1B-DR4	Q07793	1604 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	TPS3	P38426	1054 aa	Known RBP	2.71	□□□□□ -1.98
SYH1	YPL105C	ULI1	P43604	169 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	PEX21	P50091	288 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	YNL115C	P53925	644 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	DOS2	P54858	310 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	KAR5	Q04746	504 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	SVF1	Q05515	481 aa		2.71	□□□□□ -1.98
SYH1	YPL105C	TUM1	Q08686	304 aa	Known RBP	2.71	□□□□□ -1.98
SYH1	YPL105C	TRM1	P15565	570 aa	Known RBP	2.7	□□□□□ -1.98
SYH1	YPL105C	PPX1	P38698	397 aa		2.7	□□□□□ -1.98
SYH1	YPL105C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
SYH1	YPL105C	MDJ2	P42834	146 aa		2.7	□□□□□ -1.98
SYH1	YPL105C	NNF1	P47149	201 aa		2.7	□□□□□ -1.98
SYH1	YPL105C	RTF1	P53064	558 aa		2.7	□□□□□ -1.98
SYH1	YPL105C	CWC15	Q03772	175 aa	Known RBP	2.7	□□□□□ -1.98
SYH1	YPL105C	SPC42	P36094	363 aa		2.7	□□□□□ -1.98
SYH1	YPL105C	GRS1	P38088	690 aa	Known RBP	2.7	□□□□□ -1.98
SYH1	YPL105C	GTT3	P39996	337 aa		2.7	□□□□□ -1.98
SYH1	YPL105C	FPR4	Q06205	392 aa	Predicted RBP	2.7	□□□□□ -1.98
SYH1	YPL105C	ENV9	Q08651	330 aa		2.69	□□□□□ -1.98
SYH1	YPL105C	WHI5	Q12416	295 aa		2.69	□□□□□ -1.98
SYH1	YPL105C	PUS6	P53294	404 aa		2.69	□□□□□ -1.98
SYH1	YPL105C	PUF6	Q04373	656 aa	Known RBP	2.69	□□□□□ -1.98
SYH1	YPL105C	MSB4	Q12317	492 aa		2.69	□□□□□ -1.98
SYH1	YPL105C	BNI1	P41832	1953 aa		2.69	□□□□□ -1.98
SYH1	YPL105C	ISF1	P32488	338 aa		2.68	□□□□□ -1.98
SYH1	YPL105C	SEC8	P32855	1065 aa		2.68	□□□□□ -1.98
SYH1	YPL105C	THI12	P42883	340 aa		2.68	□□□□□ -1.98
SYH1	YPL105C	THI5	P43534	340 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms