RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W PSK1P31374 1356 aa11.38□□□□□ -0.59
AMF1YOR378W PPH3P32345 308 aa11.38□□□□□ -0.59
AMF1YOR378W PDS5Q04264 1277 aa11.37□□□□□ -0.59
AMF1YOR378W SEC3P33332 1336 aaKnown RBP11.34□□□□□ -0.59
AMF1YOR378W FKH1P40466 484 aa11.33□□□□□ -0.6
AMF1YOR378W RTG3P38165 486 aa11.3□□□□□ -0.6
AMF1YOR378W YML133CQ03099 1374 aa11.29□□□□□ -0.6
AMF1YOR378W YLL067CQ07888 1374 aa11.29□□□□□ -0.6
AMF1YOR378W YLL066CQ99208 1374 aa11.29□□□□□ -0.6
AMF1YOR378W LEU2P04173 364 aaPredicted RBP11.29□□□□□ -0.6
AMF1YOR378W MTR4P47047 1073 aaKnown RBP11.28□□□□□ -0.6
AMF1YOR378W PTP3P40048 928 aa11.26□□□□□ -0.61
AMF1YOR378W ADE6P38972 1358 aaKnown RBP11.26□□□□□ -0.61
AMF1YOR378W SPT7P35177 1332 aa11.26□□□□□ -0.61
AMF1YOR378W MLP1Q02455 1875 aaKnown RBP11.25□□□□□ -0.61
AMF1YOR378W PSD2P53037 1138 aaKnown RBP11.25□□□□□ -0.61
AMF1YOR378W PRP43P53131 767 aaKnown RBP11.22□□□□□ -0.61
AMF1YOR378W CSE4P36012 229 aa11.2□□□□□ -0.62
AMF1YOR378W PDI1P17967 522 aaKnown RBP11.19□□□□□ -0.62
AMF1YOR378W RPS24AP0CX31 135 aaKnown RBP11.18□□□□□ -0.62
AMF1YOR378W RPS24BP0CX32 135 aaKnown RBP11.18□□□□□ -0.62
AMF1YOR378W RTF1P53064 558 aa11.18□□□□□ -0.62
AMF1YOR378W NST1P53935 1240 aa11.17□□□□□ -0.62
AMF1YOR378W TAP42Q04372 366 aa11.17□□□□□ -0.62
AMF1YOR378W LEU3P08638 886 aa11.16□□□□□ -0.62
AMF1YOR378W PRP45P28004 379 aaPredicted RBP11.16□□□□□ -0.62
AMF1YOR378W PRP5P21372 849 aaPredicted RBP11.14□□□□□ -0.63
AMF1YOR378W YAH1Q12184 172 aaKnown RBP11.14□□□□□ -0.63
AMF1YOR378W GRX4P32642 244 aa11.14□□□□□ -0.63
AMF1YOR378W TY4B-HP0C2J7 1802 aa11.13□□□□□ -0.63
AMF1YOR378W TY4B-JP47024 1803 aa11.13□□□□□ -0.63
AMF1YOR378W YEF3P16521 1044 aaKnown RBP11.12□□□□□ -0.63
AMF1YOR378W ENP1P38333 483 aaKnown RBP11.12□□□□□ -0.63
AMF1YOR378W RRP5Q05022 1729 aaKnown RBP11.1□□□□□ -0.63
AMF1YOR378W KAR2P16474 682 aaKnown RBP11.1□□□□□ -0.63
AMF1YOR378W REB1P21538 810 aa11.1□□□□□ -0.63
AMF1YOR378W GAS4Q08271 471 aa11.09□□□□□ -0.63
AMF1YOR378W ENT1Q12518 454 aa11.09□□□□□ -0.63
AMF1YOR378W TRK1P12685 1235 aa11.09□□□□□ -0.63
AMF1YOR378W HIM1Q06674 414 aa11.09□□□□□ -0.63
AMF1YOR378W AUS1Q08409 1394 aa11.09□□□□□ -0.63
AMF1YOR378W DPS1P04802 557 aaKnown RBP11.08□□□□□ -0.64
AMF1YOR378W APP1P53933 587 aa11.08□□□□□ -0.64
AMF1YOR378W MSB3P48566 633 aaPredicted RBP11.07□□□□□ -0.64
AMF1YOR378W SLM3Q12093 417 aa11.07□□□□□ -0.64
AMF1YOR378W IOC4Q04213 475 aa11.05□□□□□ -0.64
AMF1YOR378W ENV9Q08651 330 aa11.04□□□□□ -0.64
AMF1YOR378W TCB1Q12466 1186 aa11.04□□□□□ -0.64
AMF1YOR378W YRF1-2P40105 1681 aa11.02□□□□□ -0.64
AMF1YOR378W PAP2P53632 584 aaKnown RBP11.02□□□□□ -0.65
AMF1YOR378W RPO41P13433 1351 aaKnown RBP11.01□□□□□ -0.65
AMF1YOR378W RSF2P46974 1380 aa10.99□□□□□ -0.65
AMF1YOR378W NSR1P27476 414 aaKnown RBP RIP-Chip data10.99□□□□□ -0.65not detected
AMF1YOR378W IMH1Q06704 911 aaKnown RBP10.99□□□□□ -0.65
AMF1YOR378W XKS1P42826 600 aa10.98□□□□□ -0.65
AMF1YOR378W RRP46P53256 223 aaPredicted RBP10.96□□□□□ -0.65
AMF1YOR378W YIL177CP40434 1758 aa10.96□□□□□ -0.65
AMF1YOR378W YJL225CP40889 1758 aa10.96□□□□□ -0.65
AMF1YOR378W RTR1P40084 226 aaPredicted RBP10.94□□□□□ -0.66
AMF1YOR378W IES2P40154 320 aa10.94□□□□□ -0.66
AMF1YOR378W YIL055CP40523 627 aaKnown RBP10.94□□□□□ -0.66
AMF1YOR378W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.94□□□□□ -0.66not detected
AMF1YOR378W FKS3Q04952 1785 aa10.92□□□□□ -0.66
AMF1YOR378W RPP0P05317 312 aaKnown RBP10.92□□□□□ -0.66
AMF1YOR378W AKL1P38080 1108 aaKnown RBP10.92□□□□□ -0.66
AMF1YOR378W YDL144CQ07589 356 aa10.92□□□□□ -0.66
AMF1YOR378W URB1P34241 1764 aaKnown RBP10.92□□□□□ -0.66
AMF1YOR378W RCR1P38212 213 aa10.91□□□□□ -0.66
AMF1YOR378W DSD1P53095 428 aa10.91□□□□□ -0.66
AMF1YOR378W SNF2P22082 1703 aa10.91□□□□□ -0.66
AMF1YOR378W APC1P53886 1748 aa10.9□□□□□ -0.66
AMF1YOR378W SIR4P11978 1358 aa10.9□□□□□ -0.66
AMF1YOR378W MPP10P47083 593 aaKnown RBP10.89□□□□□ -0.67
AMF1YOR378W PRD1P25375 712 aa10.89□□□□□ -0.67
AMF1YOR378W PRS1P32895 427 aaKnown RBP10.89□□□□□ -0.67
AMF1YOR378W VPS27P40343 622 aaKnown RBP10.88□□□□□ -0.67
AMF1YOR378W CTF4Q01454 927 aa10.88□□□□□ -0.67
AMF1YOR378W YRF1-4O13559 1382 aa10.87□□□□□ -0.67
AMF1YOR378W ROM2P51862 1356 aaKnown RBP10.87□□□□□ -0.67
AMF1YOR378W HSP104P31539 908 aaKnown RBP10.87□□□□□ -0.67
AMF1YOR378W YKL133CP36066 463 aa10.87□□□□□ -0.67
AMF1YOR378W MEC3Q02574 474 aa10.87□□□□□ -0.67
AMF1YOR378W CDC45Q08032 650 aa10.85□□□□□ -0.67
AMF1YOR378W YRF1-3P0CX14 1859 aa10.84□□□□□ -0.67
AMF1YOR378W YRF1-7P0CX15 1859 aa10.84□□□□□ -0.67
AMF1YOR378W YRF1-6P53819 1859 aa10.84□□□□□ -0.67
AMF1YOR378W NTH2P35172 780 aa10.84□□□□□ -0.67
AMF1YOR378W THI22Q06490 572 aa10.84□□□□□ -0.67
AMF1YOR378W DOT5P40553 215 aa10.83□□□□□ -0.68
AMF1YOR378W AOS1Q06624 347 aa10.83□□□□□ -0.68
AMF1YOR378W YNL050CP53952 270 aa10.82□□□□□ -0.68
AMF1YOR378W INP54Q08227 384 aaKnown RBP10.81□□□□□ -0.68
AMF1YOR378W SAP155P43612 1002 aa10.8□□□□□ -0.68
AMF1YOR378W ADE16P54113 591 aaKnown RBP10.8□□□□□ -0.68
AMF1YOR378W YMR074CQ04773 145 aa10.8□□□□□ -0.68
AMF1YOR378W SUI2P20459 304 aaKnown RBP10.79□□□□□ -0.68
AMF1YOR378W TPD3P31383 635 aa10.79□□□□□ -0.68
AMF1YOR378W GLN1P32288 370 aaKnown RBP10.79□□□□□ -0.68
AMF1YOR378W FOX2Q02207 900 aaKnown RBP10.79□□□□□ -0.68
AMF1YOR378W FRK1Q03002 865 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms