RNA–Protein interactions for RNA: YOR361C

PRT1, Transcript of eIF3b subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene PRT1, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRT1YOR361C PKH3Q03306 898 aaPredicted RBP6.94□□□□□ -1.3
PRT1YOR361C ESS1P22696 170 aa6.93□□□□□ -1.3
PRT1YOR361C RAD54P32863 898 aa6.93□□□□□ -1.3
PRT1YOR361C RNH70P53331 553 aa6.93□□□□□ -1.3
PRT1YOR361C SCJ1P25303 377 aa6.92□□□□□ -1.3
PRT1YOR361C TPS3P38426 1054 aaKnown RBP6.92□□□□□ -1.3
PRT1YOR361C YHL050CP38721 697 aa6.92□□□□□ -1.3
PRT1YOR361C YHR219WP38900 624 aa6.92□□□□□ -1.3
PRT1YOR361C YGR273CP53329 174 aa6.92□□□□□ -1.3
PRT1YOR361C YEL077CQ3E7X8 1277 aa6.92□□□□□ -1.3
PRT1YOR361C YJU3P28321 313 aa6.92□□□□□ -1.3
PRT1YOR361C MDJ2P42834 146 aa6.92□□□□□ -1.3
PRT1YOR361C YOL098CQ12496 1037 aa6.91□□□□□ -1.3
PRT1YOR361C RDS2P19541 446 aaKnown RBP6.9□□□□□ -1.31
PRT1YOR361C UBX5Q06682 500 aa6.9□□□□□ -1.31
PRT1YOR361C MMP1Q12372 583 aa6.9□□□□□ -1.31
PRT1YOR361C SPT5P27692 1063 aaKnown RBP6.89□□□□□ -1.31
PRT1YOR361C SEC8P32855 1065 aa6.89□□□□□ -1.31
PRT1YOR361C PPX1P38698 397 aa6.89□□□□□ -1.31
PRT1YOR361C ECM23Q02710 187 aa6.89□□□□□ -1.31
PRT1YOR361C SOL3P38858 249 aa6.89□□□□□ -1.31
PRT1YOR361C MVP1P40959 511 aaKnown RBP6.89□□□□□ -1.31
PRT1YOR361C YOR238WQ08634 303 aa6.89□□□□□ -1.31
PRT1YOR361C CLB5P30283 435 aa6.88□□□□□ -1.31
PRT1YOR361C RSC30P38781 883 aa6.88□□□□□ -1.31
PRT1YOR361C OYE2Q03558 400 aaKnown RBP6.88□□□□□ -1.31
PRT1YOR361C GUT1P32190 709 aa6.88□□□□□ -1.31
PRT1YOR361C MAK16P10962 306 aaPredicted RBP6.87□□□□□ -1.31
PRT1YOR361C SUB1P54000 292 aaKnown RBP6.87□□□□□ -1.31
PRT1YOR361C CWC15Q03772 175 aaKnown RBP6.87□□□□□ -1.31
PRT1YOR361C PRY3P47033 881 aa6.86□□□□□ -1.31
PRT1YOR361C ATH1P48016 1211 aa6.86□□□□□ -1.31
PRT1YOR361C TPO2P53283 614 aa6.86□□□□□ -1.31
PRT1YOR361C ARG8P18544 423 aa6.85□□□□□ -1.31
PRT1YOR361C GAP1P19145 602 aaPredicted RBP6.85□□□□□ -1.31
PRT1YOR361C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
PRT1YOR361C YJR107WP47145 328 aa6.85□□□□□ -1.31
PRT1YOR361C KAR5Q04746 504 aa6.85□□□□□ -1.31
PRT1YOR361C TOM20P35180 183 aa6.85□□□□□ -1.31
PRT1YOR361C OSW7P43611 510 aa6.85□□□□□ -1.31
PRT1YOR361C YMR196WQ04336 1088 aa6.85□□□□□ -1.31
PRT1YOR361C JIP5Q06214 492 aaPredicted RBP6.85□□□□□ -1.31
PRT1YOR361C IOC3P43596 787 aa6.84□□□□□ -1.31
PRT1YOR361C SIT4P20604 311 aa6.84□□□□□ -1.31
PRT1YOR361C GRS1P38088 690 aaKnown RBP6.84□□□□□ -1.31
PRT1YOR361C GRE2Q12068 342 aaKnown RBP6.84□□□□□ -1.31
PRT1YOR361C VMA1P17255 1071 aaKnown RBP6.83□□□□□ -1.32
PRT1YOR361C VPS72Q03388 795 aa6.83□□□□□ -1.32
PRT1YOR361C CIT2P08679 460 aa6.83□□□□□ -1.32
PRT1YOR361C UBX7P38349 436 aa6.83□□□□□ -1.32
PRT1YOR361C GAL2P13181 574 aa6.82□□□□□ -1.32
PRT1YOR361C NST1P53935 1240 aa6.82□□□□□ -1.32
PRT1YOR361C HAA1Q12753 694 aaKnown RBP6.82□□□□□ -1.32
PRT1YOR361C MET1P36150 593 aa6.81□□□□□ -1.32
PRT1YOR361C KTR7P40504 517 aa6.81□□□□□ -1.32
PRT1YOR361C ALD3P54114 506 aa6.81□□□□□ -1.32
PRT1YOR361C PPG1P32838 368 aa6.8□□□□□ -1.32
PRT1YOR361C FPR3P38911 411 aaKnown RBP6.8□□□□□ -1.32
PRT1YOR361C ALG12P53730 551 aa6.8□□□□□ -1.32
PRT1YOR361C BUD21Q08492 214 aaPredicted RBP6.8□□□□□ -1.32
PRT1YOR361C TSR4P25040 408 aa6.8□□□□□ -1.32
PRT1YOR361C MET4P32389 672 aa6.8□□□□□ -1.32
PRT1YOR361C MAP2P38174 421 aaKnown RBP6.8□□□□□ -1.32
PRT1YOR361C BOL3P39724 118 aa6.8□□□□□ -1.32
PRT1YOR361C VAC8P39968 578 aa6.8□□□□□ -1.32
PRT1YOR361C ATG1P53104 897 aa6.8□□□□□ -1.32
PRT1YOR361C MNL2Q12205 849 aa6.8□□□□□ -1.32
PRT1YOR361C FRT1Q99332 602 aa6.8□□□□□ -1.32
PRT1YOR361C THI12P42883 340 aa6.79□□□□□ -1.32
PRT1YOR361C THI5P43534 340 aa6.79□□□□□ -1.32
PRT1YOR361C THI11P47183 340 aa6.79□□□□□ -1.32
PRT1YOR361C THI13Q07748 340 aa6.79□□□□□ -1.32
PRT1YOR361C PDR1P12383 1068 aa6.78□□□□□ -1.32
PRT1YOR361C RRP14P36080 434 aaKnown RBP6.78□□□□□ -1.32
PRT1YOR361C NUT2Q06213 157 aa6.78□□□□□ -1.32
PRT1YOR361C YPP1P46951 817 aa6.78□□□□□ -1.32
PRT1YOR361C FYV10P40492 516 aa6.77□□□□□ -1.33
PRT1YOR361C YPR109WQ06104 294 aa6.77□□□□□ -1.33
PRT1YOR361C MCM16Q12262 181 aa6.77□□□□□ -1.33
PRT1YOR361C GIN4Q12263 1142 aa6.77□□□□□ -1.33
PRT1YOR361C SRP40P32583 406 aaPredicted RBP6.76□□□□□ -1.33
PRT1YOR361C NAF1P53919 492 aaKnown RBP6.76□□□□□ -1.33
PRT1YOR361C BUD6P41697 788 aa6.76□□□□□ -1.33
PRT1YOR361C PIB1Q06651 286 aa6.76□□□□□ -1.33
PRT1YOR361C MGE1P38523 228 aa6.75□□□□□ -1.33
PRT1YOR361C UBP10P53874 792 aaPredicted RBP6.75□□□□□ -1.33
PRT1YOR361C ALD6P54115 500 aaKnown RBP6.75□□□□□ -1.33
PRT1YOR361C RPN4Q03465 531 aa6.75□□□□□ -1.33
PRT1YOR361C PUF6Q04373 656 aaKnown RBP6.75□□□□□ -1.33
PRT1YOR361C TFG1P41895 735 aaPredicted RBP6.75□□□□□ -1.33
PRT1YOR361C PNP1Q05788 311 aa6.75□□□□□ -1.33
PRT1YOR361C YKL091CP33324 310 aaKnown RBP6.74□□□□□ -1.33
PRT1YOR361C ILV3P39522 585 aaKnown RBP6.74□□□□□ -1.33
PRT1YOR361C YCK3P39962 524 aa6.74□□□□□ -1.33
PRT1YOR361C SSF2Q12153 453 aaPredicted RBP6.74□□□□□ -1.33
PRT1YOR361C VPS16Q03308 798 aa6.74□□□□□ -1.33
PRT1YOR361C SSB1P11484 613 aaKnown RBP6.73□□□□□ -1.33
PRT1YOR361C GRX4P32642 244 aa6.73□□□□□ -1.33
PRT1YOR361C SSB2P40150 613 aaKnown RBP6.73□□□□□ -1.33
PRT1YOR361C NSE3Q05541 303 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms