RNA–Protein interactions for RNA: YOR055W

YOR055W, Transcript of Dubious open reading frame, yeast

Gene YOR055W, Length 435 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOR055W	YOR055W	DCD1	P06773	312 aa		3.28	□□□□□ -1.88
YOR055W	YOR055W	SPE2	P21182	396 aa		3.28	□□□□□ -1.88
YOR055W	YOR055W	ALD4	P46367	519 aa	Known RBP	3.28	□□□□□ -1.88
YOR055W	YOR055W	TAF8	Q03750	510 aa		3.28	□□□□□ -1.88
YOR055W	YOR055W	URN1	Q06525	465 aa	Known RBP	3.28	□□□□□ -1.88
YOR055W	YOR055W	RTG3	P38165	486 aa		3.27	□□□□□ -1.89
YOR055W	YOR055W	CHZ1	P40019	153 aa	Predicted RBP	3.27	□□□□□ -1.89
YOR055W	YOR055W	UBP10	P53874	792 aa	Predicted RBP	3.27	□□□□□ -1.89
YOR055W	YOR055W	CAB1	Q04430	367 aa		3.27	□□□□□ -1.89
YOR055W	YOR055W	DIP2	Q12220	943 aa	Predicted RBP	3.27	□□□□□ -1.89
YOR055W	YOR055W	YKR023W	P36119	530 aa	Known RBP	3.26	□□□□□ -1.89
YOR055W	YOR055W	BCK1	Q01389	1478 aa		3.26	□□□□□ -1.89
YOR055W	YOR055W	FKH1	P40466	484 aa		3.25	□□□□□ -1.89
YOR055W	YOR055W	YEF3	P16521	1044 aa	Known RBP	3.24	□□□□□ -1.89
YOR055W	YOR055W	HO	P09932	586 aa		3.23	□□□□□ -1.89
YOR055W	YOR055W	TRK1	P12685	1235 aa		3.23	□□□□□ -1.89
YOR055W	YOR055W	FUN12	P39730	1002 aa	Known RBP	3.22	□□□□□ -1.89
YOR055W	YOR055W	RIA1	P53893	1110 aa		3.22	□□□□□ -1.89
YOR055W	YOR055W	KRE5	P22023	1365 aa		3.22	□□□□□ -1.89
YOR055W	YOR055W	YML133C	Q03099	1374 aa		3.22	□□□□□ -1.89
YOR055W	YOR055W	YLL067C	Q07888	1374 aa		3.22	□□□□□ -1.89
YOR055W	YOR055W	YLL066C	Q99208	1374 aa		3.22	□□□□□ -1.89
YOR055W	YOR055W	DNF3	Q12674	1656 aa		3.21	□□□□□ -1.9
YOR055W	YOR055W	HAP1	P0CE41	1502 aa		3.21	□□□□□ -1.9
YOR055W	YOR055W	NAP1	P25293	417 aa	Known RBP	3.21	□□□□□ -1.9
YOR055W	YOR055W	PPH3	P32345	308 aa		3.21	□□□□□ -1.9
YOR055W	YOR055W	SCT1	P32784	759 aa		3.21	□□□□□ -1.9
YOR055W	YOR055W	UBP9	P39967	754 aa		3.21	□□□□□ -1.9
YOR055W	YOR055W	MRX12	P47084	519 aa		3.21	□□□□□ -1.9
YOR055W	YOR055W	RCM1	P53972	490 aa		3.21	□□□□□ -1.9
YOR055W	YOR055W	USO1	P25386	1790 aa		3.2	□□□□□ -1.9
YOR055W	YOR055W	VPS27	P40343	622 aa	Known RBP	3.2	□□□□□ -1.9
YOR055W	YOR055W	RRP46	P53256	223 aa	Predicted RBP	3.2	□□□□□ -1.9
YOR055W	YOR055W	MAK10	Q02197	733 aa		3.2	□□□□□ -1.9
YOR055W	YOR055W	IOC4	Q04213	475 aa		3.2	□□□□□ -1.9
YOR055W	YOR055W	YDL144C	Q07589	356 aa		3.2	□□□□□ -1.9
YOR055W	YOR055W	RVB2	Q12464	471 aa	Known RBP	3.2	□□□□□ -1.9
YOR055W	YOR055W	CFT1	Q06632	1357 aa	Known RBP	3.2	□□□□□ -1.9
YOR055W	YOR055W	RPP0	P05317	312 aa	Known RBP	3.19	□□□□□ -1.9
YOR055W	YOR055W	SUI2	P20459	304 aa	Known RBP	3.19	□□□□□ -1.9
YOR055W	YOR055W	MPP10	P47083	593 aa	Known RBP	3.19	□□□□□ -1.9
YOR055W	YOR055W	SCY1	P53009	804 aa		3.19	□□□□□ -1.9
YOR055W	YOR055W	HIM1	Q06674	414 aa		3.19	□□□□□ -1.9
YOR055W	YOR055W	CDC45	Q08032	650 aa		3.19	□□□□□ -1.9
YOR055W	YOR055W	PSK1	P31374	1356 aa		3.18	□□□□□ -1.9
YOR055W	YOR055W	ABP1	P15891	592 aa	Known RBP	3.18	□□□□□ -1.9
YOR055W	YOR055W	YNR029C	P53729	429 aa	Known RBP	3.18	□□□□□ -1.9
YOR055W	YOR055W	SNF2	P22082	1703 aa		3.17	□□□□□ -1.9
YOR055W	YOR055W	LEU2	P04173	364 aa	Predicted RBP	3.17	□□□□□ -1.9
YOR055W	YOR055W	CPS1	P27614	576 aa		3.17	□□□□□ -1.9
YOR055W	YOR055W	RTR1	P40084	226 aa	Predicted RBP	3.17	□□□□□ -1.9
YOR055W	YOR055W	AUS1	Q08409	1394 aa		3.16	□□□□□ -1.9
YOR055W	YOR055W	SAP155	P43612	1002 aa		3.16	□□□□□ -1.9
YOR055W	YOR055W	TAP42	Q04372	366 aa		3.16	□□□□□ -1.9
YOR055W	YOR055W	THI22	Q06490	572 aa		3.16	□□□□□ -1.9
YOR055W	YOR055W	TFC8	Q12308	588 aa		3.16	□□□□□ -1.9
YOR055W	YOR055W	TY1B-NL2	Q99337	1749 aa	Known RBP	3.16	□□□□□ -1.9
YOR055W	YOR055W	YIL177C	P40434	1758 aa		3.15	□□□□□ -1.9
YOR055W	YOR055W	YJL225C	P40889	1758 aa		3.15	□□□□□ -1.9
YOR055W	YOR055W	TY4B-H	P0C2J7	1802 aa		3.15	□□□□□ -1.91
YOR055W	YOR055W	TY4B-J	P47024	1803 aa		3.15	□□□□□ -1.91
YOR055W	YOR055W	RPS24A	P0CX31	135 aa	Known RBP	3.15	□□□□□ -1.91
YOR055W	YOR055W	RPS24B	P0CX32	135 aa	Known RBP	3.15	□□□□□ -1.91
YOR055W	YOR055W	KAR2	P16474	682 aa	Known RBP	3.15	□□□□□ -1.91
YOR055W	YOR055W	TPD3	P31383	635 aa		3.15	□□□□□ -1.91
YOR055W	YOR055W	TGL3	P40308	642 aa		3.15	□□□□□ -1.91
YOR055W	YOR055W	MTR4	P47047	1073 aa	Known RBP	3.15	□□□□□ -1.91
YOR055W	YOR055W	PRP43	P53131	767 aa	Known RBP	3.15	□□□□□ -1.91
YOR055W	YOR055W	PAP2	P53632	584 aa	Known RBP	3.15	□□□□□ -1.91
YOR055W	YOR055W	PDI1	P17967	522 aa	Known RBP	3.14	□□□□□ -1.91
YOR055W	YOR055W	PRD1	P25375	712 aa		3.14	□□□□□ -1.91
YOR055W	YOR055W	CSE4	P36012	229 aa		3.14	□□□□□ -1.91
YOR055W	YOR055W	YRB30	P53107	440 aa	Predicted RBP	3.14	□□□□□ -1.91
YOR055W	YOR055W	HEF3	P53978	1044 aa	Known RBP	3.14	□□□□□ -1.91
YOR055W	YOR055W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
YOR055W	YOR055W	GAS4	Q08271	471 aa		3.14	□□□□□ -1.91
YOR055W	YOR055W	RPC31	P17890	251 aa		3.13	□□□□□ -1.91
YOR055W	YOR055W	TFA1	P36100	482 aa		3.13	□□□□□ -1.91
YOR055W	YOR055W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
YOR055W	YOR055W	RTF1	P53064	558 aa		3.13	□□□□□ -1.91
YOR055W	YOR055W	RTT109	Q07794	436 aa		3.13	□□□□□ -1.91
YOR055W	YOR055W	APC1	P53886	1748 aa		3.13	□□□□□ -1.91
YOR055W	YOR055W	RRP5	Q05022	1729 aa	Known RBP	3.13	□□□□□ -1.91
YOR055W	YOR055W	ADE6	P38972	1358 aa	Known RBP	3.12	□□□□□ -1.91
YOR055W	YOR055W	GRX4	P32642	244 aa		3.12	□□□□□ -1.91
YOR055W	YOR055W	SLX5	P32828	619 aa	Known RBP	3.12	□□□□□ -1.91
YOR055W	YOR055W	TIF4632	P39936	914 aa	Known RBP	3.12	□□□□□ -1.91
YOR055W	YOR055W	YIL092W	P40497	633 aa		3.12	□□□□□ -1.91
YOR055W	YOR055W	URB1	P34241	1764 aa	Known RBP	3.11	□□□□□ -1.91
YOR055W	YOR055W	DPS1	P04802	557 aa	Known RBP	3.11	□□□□□ -1.91
YOR055W	YOR055W	RAD2	P07276	1031 aa		3.11	□□□□□ -1.91
YOR055W	YOR055W	DAL5	P15365	543 aa		3.11	□□□□□ -1.91
YOR055W	YOR055W	SPT21	P35209	758 aa		3.11	□□□□□ -1.91
YOR055W	YOR055W	FPR3	P38911	411 aa	Known RBP	3.11	□□□□□ -1.91
YOR055W	YOR055W	THI12	P42883	340 aa		3.11	□□□□□ -1.91
YOR055W	YOR055W	THI5	P43534	340 aa		3.11	□□□□□ -1.91
YOR055W	YOR055W	THI11	P47183	340 aa		3.11	□□□□□ -1.91
YOR055W	YOR055W	YMR196W	Q04336	1088 aa		3.11	□□□□□ -1.91
YOR055W	YOR055W	THI13	Q07748	340 aa		3.11	□□□□□ -1.91
YOR055W	YOR055W	RPO41	P13433	1351 aa	Known RBP	3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms