RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W ESS1P22696 170 aa5.7□□□□□ -1.5
VPS27YNR006W BIM1P40013 344 aa5.7□□□□□ -1.5
VPS27YNR006W YJL007CP47080 104 aa5.7□□□□□ -1.5
VPS27YNR006W ISU2Q12056 156 aa5.7□□□□□ -1.5
VPS27YNR006W YRR1Q12172 810 aa5.7□□□□□ -1.5
VPS27YNR006W MRX12P47084 519 aa5.69□□□□□ -1.5
VPS27YNR006W NMA111P53920 997 aa5.69□□□□□ -1.5
VPS27YNR006W TFG1P41895 735 aaPredicted RBP5.68□□□□□ -1.5
VPS27YNR006W PKH3Q03306 898 aaPredicted RBP5.68□□□□□ -1.5
VPS27YNR006W YJU3P28321 313 aa5.68□□□□□ -1.5
VPS27YNR006W ATG32P40458 529 aa5.68□□□□□ -1.5
VPS27YNR006W RAD59Q12223 238 aa5.68□□□□□ -1.5
VPS27YNR006W YDL129WQ07555 291 aa5.66□□□□□ -1.5
VPS27YNR006W YBL036CP38197 257 aa5.66□□□□□ -1.5
VPS27YNR006W BIO2P32451 375 aa5.64□□□□□ -1.51
VPS27YNR006W SLY41P22215 453 aa5.64□□□□□ -1.51
VPS27YNR006W RSC30P38781 883 aa5.64□□□□□ -1.51
VPS27YNR006W RTF1P53064 558 aa5.64□□□□□ -1.51
VPS27YNR006W YNL115CP53925 644 aa5.64□□□□□ -1.51
VPS27YNR006W TIF1P10081 395 aaKnown RBP5.63□□□□□ -1.51
VPS27YNR006W PDR1P12383 1068 aa5.63□□□□□ -1.51
VPS27YNR006W ARG8P18544 423 aa5.63□□□□□ -1.51
VPS27YNR006W NUD1P32336 851 aa5.63□□□□□ -1.51
VPS27YNR006W YDR344CQ05510 147 aa5.63□□□□□ -1.51
VPS27YNR006W CSE4P36012 229 aa5.62□□□□□ -1.51
VPS27YNR006W NOP7P53261 605 aaKnown RBP5.62□□□□□ -1.51
VPS27YNR006W ERF2Q06551 359 aa5.62□□□□□ -1.51
VPS27YNR006W KEX2P13134 814 aa5.62□□□□□ -1.51
VPS27YNR006W HAP5Q02516 242 aa5.62□□□□□ -1.51
VPS27YNR006W ERG12P07277 443 aa5.61□□□□□ -1.51
VPS27YNR006W SSA4P22202 642 aaKnown RBP5.61□□□□□ -1.51
VPS27YNR006W SAP30P38429 201 aa5.61□□□□□ -1.51
VPS27YNR006W ARH1P48360 493 aa5.61□□□□□ -1.51
VPS27YNR006W STR2P47164 639 aa5.6□□□□□ -1.51
VPS27YNR006W YNL108CP53929 270 aa5.6□□□□□ -1.51
VPS27YNR006W LAM6Q08001 693 aa5.6□□□□□ -1.51
VPS27YNR006W PAM1P37304 830 aaKnown RBP5.59□□□□□ -1.51
VPS27YNR006W RPL34BP40525 121 aaKnown RBP5.59□□□□□ -1.51
VPS27YNR006W SUP45P12385 437 aaKnown RBP5.58□□□□□ -1.52
VPS27YNR006W TRM1P15565 570 aaKnown RBP5.58□□□□□ -1.52
VPS27YNR006W ISM1P48526 1002 aa5.58□□□□□ -1.52
VPS27YNR006W SNU71P53207 620 aaKnown RBP5.58□□□□□ -1.52
VPS27YNR006W MAK16P10962 306 aaPredicted RBP5.58□□□□□ -1.52
VPS27YNR006W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
VPS27YNR006W RAM1P22007 431 aa5.57□□□□□ -1.52
VPS27YNR006W CPS1P27614 576 aa5.57□□□□□ -1.52
VPS27YNR006W RTG2P32608 588 aaKnown RBP5.57□□□□□ -1.52
VPS27YNR006W SLD2P34252 453 aa5.57□□□□□ -1.52
VPS27YNR006W PUS6P53294 404 aa5.57□□□□□ -1.52
VPS27YNR006W SEN54Q02825 467 aaPredicted RBP5.57□□□□□ -1.52
VPS27YNR006W NOB1Q08444 459 aaKnown RBP5.57□□□□□ -1.52
VPS27YNR006W YDJ1P25491 409 aaKnown RBP5.56□□□□□ -1.52
VPS27YNR006W NPL4P33755 580 aa5.56□□□□□ -1.52
VPS27YNR006W BNI4P53858 892 aa5.56□□□□□ -1.52
VPS27YNR006W YPR204WQ08995 1032 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-DR4O74302 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-HP0C2I4 478 aaKnown RBP5.56□□□□□ -1.52
VPS27YNR006W TY1A-AP0CX57 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-PR1P0CX58 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-ORP0CX59 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-PR2P0CX60 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-DR5P0CX65 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-ER2P0CX66 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-GR3P0CX67 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-LR1P0CX68 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-MR2P0CX69 440 aa5.56□□□□□ -1.52
VPS27YNR006W SEC2P17065 759 aa5.56□□□□□ -1.52
VPS27YNR006W TTI1P36097 1038 aa5.56□□□□□ -1.52
VPS27YNR006W SSF1P38789 453 aaPredicted RBP5.56□□□□□ -1.52
VPS27YNR006W TY1A-JR2P47099 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-DR1Q03856 440 aa5.56□□□□□ -1.52
VPS27YNR006W AGE1Q04412 482 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-ML1Q04706 440 aaKnown RBP5.56□□□□□ -1.52
VPS27YNR006W TY1A-BRQ12217 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-NL2Q12470 440 aa5.56□□□□□ -1.52
VPS27YNR006W TY1A-GR2Q12485 440 aa5.56□□□□□ -1.52
VPS27YNR006W SPT5P27692 1063 aaKnown RBP5.55□□□□□ -1.52
VPS27YNR006W ENO2P00925 437 aaKnown RBP5.54□□□□□ -1.52
VPS27YNR006W BUD20Q08004 166 aaPredicted RBP5.54□□□□□ -1.52
VPS27YNR006W CDC3P32457 520 aaKnown RBP5.54□□□□□ -1.52
VPS27YNR006W RRN6P32786 894 aa5.54□□□□□ -1.52
VPS27YNR006W ELP4Q02884 456 aaKnown RBP5.54□□□□□ -1.52
VPS27YNR006W GCD11P32481 527 aaKnown RBP5.53□□□□□ -1.52
VPS27YNR006W TUB4P53378 473 aa5.53□□□□□ -1.52
VPS27YNR006W YPR015CQ12531 247 aa5.53□□□□□ -1.52
VPS27YNR006W CHL1P22516 861 aaPredicted RBP5.52□□□□□ -1.53
VPS27YNR006W SPT23P35210 1082 aa5.52□□□□□ -1.53
VPS27YNR006W MET10P39692 1035 aa5.52□□□□□ -1.53
VPS27YNR006W ENO1P00924 437 aaKnown RBP5.51□□□□□ -1.53
VPS27YNR006W TBF1Q02457 562 aa5.51□□□□□ -1.53
VPS27YNR006W MRX10Q05648 414 aa5.51□□□□□ -1.53
VPS27YNR006W HEM3P28789 327 aa5.51□□□□□ -1.53
VPS27YNR006W PRE3P38624 215 aa5.51□□□□□ -1.53
VPS27YNR006W RIM21P48565 533 aa5.51□□□□□ -1.53
VPS27YNR006W NAF1P53919 492 aaKnown RBP5.51□□□□□ -1.53
VPS27YNR006W RPL34AP87262 121 aaPredicted RBP5.51□□□□□ -1.53
VPS27YNR006W YDL206WQ12424 762 aa5.51□□□□□ -1.53
VPS27YNR006W PTC2P39966 464 aaKnown RBP5.5□□□□□ -1.53
VPS27YNR006W YML083CQ04526 418 aa5.5□□□□□ -1.53
VPS27YNR006W PAC1P39946 494 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms