RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W MMP1Q12372 583 aa6.25□□□□□ -1.41
SRP1YNL189W KEX2P13134 814 aa6.25□□□□□ -1.41
SRP1YNL189W YJU3P28321 313 aa6.25□□□□□ -1.41
SRP1YNL189W GLN1P32288 370 aaKnown RBP6.25□□□□□ -1.41
SRP1YNL189W SSA2P10592 639 aaKnown RBP6.24□□□□□ -1.41
SRP1YNL189W STR2P47164 639 aa6.24□□□□□ -1.41
SRP1YNL189W ISM1P48526 1002 aa6.24□□□□□ -1.41
SRP1YNL189W RAM1P22007 431 aa6.23□□□□□ -1.41
SRP1YNL189W PKH3Q03306 898 aaPredicted RBP6.22□□□□□ -1.41
SRP1YNL189W YPR015CQ12531 247 aa6.22□□□□□ -1.41
SRP1YNL189W BRL1P38770 471 aa6.21□□□□□ -1.41
SRP1YNL189W SLY41P22215 453 aa6.21□□□□□ -1.42
SRP1YNL189W BNI4P53858 892 aa6.21□□□□□ -1.42
SRP1YNL189W YNL115CP53925 644 aa6.2□□□□□ -1.42
SRP1YNL189W RAD59Q12223 238 aa6.19□□□□□ -1.42
SRP1YNL189W TY1A-DR4O74302 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-HP0C2I4 478 aaKnown RBP6.18□□□□□ -1.42
SRP1YNL189W TY1A-AP0CX57 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-PR1P0CX58 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-ORP0CX59 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-PR2P0CX60 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-DR5P0CX65 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-ER2P0CX66 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-GR3P0CX67 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-LR1P0CX68 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-MR2P0CX69 440 aa6.18□□□□□ -1.42
SRP1YNL189W SPT23P35210 1082 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-JR2P47099 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-DR1Q03856 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-ML1Q04706 440 aaKnown RBP6.18□□□□□ -1.42
SRP1YNL189W BUD20Q08004 166 aaPredicted RBP6.18□□□□□ -1.42
SRP1YNL189W TY1A-BRQ12217 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-NL2Q12470 440 aa6.18□□□□□ -1.42
SRP1YNL189W TY1A-GR2Q12485 440 aa6.18□□□□□ -1.42
SRP1YNL189W SEC2P17065 759 aa6.17□□□□□ -1.42
SRP1YNL189W HGH1P48362 394 aaKnown RBP6.17□□□□□ -1.42
SRP1YNL189W BCK2P33306 851 aa6.17□□□□□ -1.42
SRP1YNL189W RSC30P38781 883 aa6.17□□□□□ -1.42
SRP1YNL189W YJL007CP47080 104 aa6.17□□□□□ -1.42
SRP1YNL189W RLF2Q12495 606 aa6.17□□□□□ -1.42
SRP1YNL189W ARG8P18544 423 aa6.16□□□□□ -1.42
SRP1YNL189W GCD11P32481 527 aaKnown RBP6.16□□□□□ -1.42
SRP1YNL189W NPL4P33755 580 aa6.16□□□□□ -1.42
SRP1YNL189W PTC2P39966 464 aaKnown RBP6.16□□□□□ -1.42
SRP1YNL189W BIM1P40013 344 aa6.16□□□□□ -1.42
SRP1YNL189W RTF1P53064 558 aa6.16□□□□□ -1.42
SRP1YNL189W ATG32P40458 529 aa6.15□□□□□ -1.42
SRP1YNL189W TRM1P15565 570 aaKnown RBP6.14□□□□□ -1.43
SRP1YNL189W YBL036CP38197 257 aa6.14□□□□□ -1.43
SRP1YNL189W AGE1Q04412 482 aa6.14□□□□□ -1.43
SRP1YNL189W BIO2P32451 375 aa6.13□□□□□ -1.43
SRP1YNL189W VRP1P37370 817 aa6.13□□□□□ -1.43
SRP1YNL189W YML082WQ04533 649 aaKnown RBP6.12□□□□□ -1.43
SRP1YNL189W TUB4P53378 473 aa6.11□□□□□ -1.43
SRP1YNL189W ERG12P07277 443 aa6.1□□□□□ -1.43
SRP1YNL189W PUS6P53294 404 aa6.1□□□□□ -1.43
SRP1YNL189W LAM6Q08001 693 aa6.1□□□□□ -1.43
SRP1YNL189W PRT1P06103 763 aaKnown RBP6.09□□□□□ -1.43
SRP1YNL189W PAC1P39946 494 aaKnown RBP6.09□□□□□ -1.43
SRP1YNL189W YNL108CP53929 270 aa6.09□□□□□ -1.43
SRP1YNL189W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SRP1YNL189W TIF1P10081 395 aaKnown RBP6.07□□□□□ -1.44
SRP1YNL189W YDJ1P25491 409 aaKnown RBP6.07□□□□□ -1.44
SRP1YNL189W XDJ1P39102 459 aa6.07□□□□□ -1.44
SRP1YNL189W RRN7P40992 514 aa6.07□□□□□ -1.44
SRP1YNL189W YDL206WQ12424 762 aa6.07□□□□□ -1.44
SRP1YNL189W MAK16P10962 306 aaPredicted RBP6.06□□□□□ -1.44
SRP1YNL189W CSE4P36012 229 aa6.06□□□□□ -1.44
SRP1YNL189W TBF1Q02457 562 aa6.05□□□□□ -1.44
SRP1YNL189W ENO2P00925 437 aaKnown RBP6.03□□□□□ -1.44
SRP1YNL189W SUP45P12385 437 aaKnown RBP6.03□□□□□ -1.44
SRP1YNL189W GYP1Q08484 637 aa6.03□□□□□ -1.44
SRP1YNL189W YPR204WQ08995 1032 aa6.03□□□□□ -1.44
SRP1YNL189W PDC1P06169 563 aaKnown RBP6.02□□□□□ -1.45
SRP1YNL189W RPL34BP40525 121 aaKnown RBP6.02□□□□□ -1.45
SRP1YNL189W RTG2P32608 588 aaKnown RBP6.01□□□□□ -1.45
SRP1YNL189W RPA14P50106 137 aa6.01□□□□□ -1.45
SRP1YNL189W SDH2P21801 266 aa6□□□□□ -1.45
SRP1YNL189W SPT16P32558 1035 aaKnown RBP6□□□□□ -1.45
SRP1YNL189W YPR097WQ06839 1073 aa5.99□□□□□ -1.45
SRP1YNL189W ENO1P00924 437 aaKnown RBP5.99□□□□□ -1.45
SRP1YNL189W ISF1P32488 338 aa5.99□□□□□ -1.45
SRP1YNL189W ALR1Q08269 859 aa5.98□□□□□ -1.45
SRP1YNL189W SPT5P27692 1063 aaKnown RBP5.97□□□□□ -1.45
SRP1YNL189W MOD5P07884 428 aa5.96□□□□□ -1.45
SRP1YNL189W PAT1P25644 796 aaKnown RBP5.96□□□□□ -1.45
SRP1YNL189W CPS1P27614 576 aa5.96□□□□□ -1.45
SRP1YNL189W TTI1P36097 1038 aa5.96□□□□□ -1.45
SRP1YNL189W FIG4P42837 879 aa5.96□□□□□ -1.45
SRP1YNL189W RIM21P48565 533 aa5.96□□□□□ -1.45
SRP1YNL189W KXD1P53158 218 aa5.96□□□□□ -1.45
SRP1YNL189W ITT1Q04638 464 aa5.96□□□□□ -1.45
SRP1YNL189W MRX10Q05648 414 aa5.96□□□□□ -1.45
SRP1YNL189W HXT10P43581 546 aa5.96□□□□□ -1.46
SRP1YNL189W NAF1P53919 492 aaKnown RBP5.96□□□□□ -1.46
SRP1YNL189W SAS4Q04003 481 aa5.96□□□□□ -1.46
SRP1YNL189W MCM16Q12262 181 aa5.96□□□□□ -1.46
SRP1YNL189W RDS2P19541 446 aaKnown RBP5.94□□□□□ -1.46
SRP1YNL189W YPR084WQ06821 456 aa5.94□□□□□ -1.46
SRP1YNL189W EMP47P43555 445 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms