RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A TIF4632P39936 914 aaKnown RBP8.86□□□□□ -0.99
KSH1YNL024C-A TGL3P40308 642 aa8.86□□□□□ -0.99
KSH1YNL024C-A RTC1Q08281 1341 aa8.85□□□□□ -0.99
KSH1YNL024C-A SCT1P32784 759 aa8.85□□□□□ -0.99
KSH1YNL024C-A IPL1P38991 367 aa8.85□□□□□ -0.99
KSH1YNL024C-A BDF1P35817 686 aa8.82□□□□□ -1
KSH1YNL024C-A SEC3P33332 1336 aaKnown RBP8.8□□□□□ -1
KSH1YNL024C-A TYS1P36421 394 aaKnown RBP8.8□□□□□ -1
KSH1YNL024C-A THI12P42883 340 aa8.8□□□□□ -1
KSH1YNL024C-A THI5P43534 340 aa8.8□□□□□ -1
KSH1YNL024C-A RSM7P47150 247 aa8.8□□□□□ -1
KSH1YNL024C-A THI11P47183 340 aa8.8□□□□□ -1
KSH1YNL024C-A YMR196WQ04336 1088 aa8.8□□□□□ -1
KSH1YNL024C-A THI13Q07748 340 aa8.8□□□□□ -1
KSH1YNL024C-A YAH1Q12184 172 aaKnown RBP8.79□□□□□ -1
KSH1YNL024C-A TY3B-IQ7LHG5 1498 aaKnown RBP8.77□□□□□ -1.01
KSH1YNL024C-A BUD31P25337 157 aaPredicted RBP8.76□□□□□ -1.01
KSH1YNL024C-A ESL2P36168 1195 aa8.76□□□□□ -1.01
KSH1YNL024C-A PDR11P40550 1411 aa8.76□□□□□ -1.01
KSH1YNL024C-A NUP192P47054 1683 aa8.75□□□□□ -1.01
KSH1YNL024C-A AI2P03876 854 aa8.72□□□□□ -1.01
KSH1YNL024C-A MHP1P43638 1398 aa8.72□□□□□ -1.01
KSH1YNL024C-A YRF1-2P40105 1681 aa8.7□□□□□ -1.02
KSH1YNL024C-A YLR271WQ06152 274 aa8.7□□□□□ -1.02
KSH1YNL024C-A BBC1P47068 1157 aa8.69□□□□□ -1.02
KSH1YNL024C-A ENP1P38333 483 aaKnown RBP8.67□□□□□ -1.02
KSH1YNL024C-A NAP1P25293 417 aaKnown RBP8.66□□□□□ -1.02
KSH1YNL024C-A TAF5P38129 798 aa8.65□□□□□ -1.02
KSH1YNL024C-A ALD4P46367 519 aaKnown RBP8.64□□□□□ -1.03
KSH1YNL024C-A YLR419WQ06698 1435 aaKnown RBP8.63□□□□□ -1.03
KSH1YNL024C-A KRE5P22023 1365 aa8.63□□□□□ -1.03
KSH1YNL024C-A BCK1Q01389 1478 aa8.63□□□□□ -1.03
KSH1YNL024C-A CFT1Q06632 1357 aaKnown RBP8.62□□□□□ -1.03
KSH1YNL024C-A TY4B-HP0C2J7 1802 aa8.62□□□□□ -1.03
KSH1YNL024C-A TY4B-JP47024 1803 aa8.62□□□□□ -1.03
KSH1YNL024C-A KIP3P53086 805 aaKnown RBP8.62□□□□□ -1.03
KSH1YNL024C-A RRP5Q05022 1729 aaKnown RBP8.62□□□□□ -1.03
KSH1YNL024C-A SPE2P21182 396 aa8.59□□□□□ -1.03
KSH1YNL024C-A SSP1P38871 571 aa8.59□□□□□ -1.03
KSH1YNL024C-A MRX12P47084 519 aa8.58□□□□□ -1.04
KSH1YNL024C-A PSD2P53037 1138 aaKnown RBP8.58□□□□□ -1.04
KSH1YNL024C-A RIA1P53893 1110 aa8.58□□□□□ -1.04
KSH1YNL024C-A SPT7P35177 1332 aa8.57□□□□□ -1.04
KSH1YNL024C-A PDS5Q04264 1277 aa8.57□□□□□ -1.04
KSH1YNL024C-A NSR1P27476 414 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04 RIP-Chip
KSH1YNL024C-A APP1P53933 587 aa8.55□□□□□ -1.04
KSH1YNL024C-A TAF8Q03750 510 aa8.55□□□□□ -1.04
KSH1YNL024C-A RAD9P14737 1309 aa8.54□□□□□ -1.04
KSH1YNL024C-A YNR029CP53729 429 aaKnown RBP8.54□□□□□ -1.04
KSH1YNL024C-A ORC1P54784 914 aaPredicted RBP8.54□□□□□ -1.04
KSH1YNL024C-A MST1P07236 462 aa8.53□□□□□ -1.04
KSH1YNL024C-A GLN1P32288 370 aaKnown RBP8.53□□□□□ -1.04
KSH1YNL024C-A IOC4Q04213 475 aa8.52□□□□□ -1.05
KSH1YNL024C-A UBP9P39967 754 aa8.51□□□□□ -1.05
KSH1YNL024C-A CAB1Q04430 367 aa8.51□□□□□ -1.05
KSH1YNL024C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
KSH1YNL024C-A FKS3Q04952 1785 aa8.49□□□□□ -1.05
KSH1YNL024C-A CHZ1P40019 153 aaPredicted RBP8.49□□□□□ -1.05
KSH1YNL024C-A FKH1P40466 484 aa8.48□□□□□ -1.05
KSH1YNL024C-A URB1P34241 1764 aaKnown RBP8.48□□□□□ -1.05
KSH1YNL024C-A PSK1P31374 1356 aa8.47□□□□□ -1.05
KSH1YNL024C-A YOR238WQ08634 303 aa8.46□□□□□ -1.06
KSH1YNL024C-A YAP5P40574 245 aa8.44□□□□□ -1.06
KSH1YNL024C-A MLP1Q02455 1875 aaKnown RBP8.44□□□□□ -1.06
KSH1YNL024C-A RPP0P05317 312 aaKnown RBP8.41□□□□□ -1.06
KSH1YNL024C-A YRF1-3P0CX14 1859 aa8.4□□□□□ -1.06
KSH1YNL024C-A YRF1-7P0CX15 1859 aa8.4□□□□□ -1.06
KSH1YNL024C-A YRF1-6P53819 1859 aa8.4□□□□□ -1.06
KSH1YNL024C-A MRM1P25270 412 aa8.4□□□□□ -1.06
KSH1YNL024C-A RTG3P38165 486 aa8.4□□□□□ -1.06
KSH1YNL024C-A YMR074CQ04773 145 aa8.4□□□□□ -1.06
KSH1YNL024C-A CST9Q06032 482 aa8.4□□□□□ -1.06
KSH1YNL024C-A ENT1Q12518 454 aa8.4□□□□□ -1.06
KSH1YNL024C-A CPS1P27614 576 aa8.39□□□□□ -1.07
KSH1YNL024C-A PRS1P32895 427 aaKnown RBP8.39□□□□□ -1.07
KSH1YNL024C-A YIL177CP40434 1758 aa8.39□□□□□ -1.07
KSH1YNL024C-A YJL225CP40889 1758 aa8.39□□□□□ -1.07
KSH1YNL024C-A LEU2P04173 364 aaPredicted RBP8.38□□□□□ -1.07
KSH1YNL024C-A MGA2P40578 1113 aa8.38□□□□□ -1.07
KSH1YNL024C-A MTR4P47047 1073 aaKnown RBP8.38□□□□□ -1.07
KSH1YNL024C-A TAP42Q04372 366 aa8.38□□□□□ -1.07
KSH1YNL024C-A ENV9Q08651 330 aa8.38□□□□□ -1.07
KSH1YNL024C-A RCM1P53972 490 aa8.37□□□□□ -1.07
KSH1YNL024C-A IMH1Q06704 911 aaKnown RBP8.37□□□□□ -1.07
KSH1YNL024C-A YML133CQ03099 1374 aa8.36□□□□□ -1.07
KSH1YNL024C-A YLL067CQ07888 1374 aa8.36□□□□□ -1.07
KSH1YNL024C-A YLL066CQ99208 1374 aa8.36□□□□□ -1.07
KSH1YNL024C-A LEU3P08638 886 aa8.36□□□□□ -1.07
KSH1YNL024C-A PDI1P17967 522 aaKnown RBP8.35□□□□□ -1.07
KSH1YNL024C-A GRX4P32642 244 aa8.35□□□□□ -1.07
KSH1YNL024C-A PPH3P32345 308 aa8.34□□□□□ -1.07
KSH1YNL024C-A YRB30P53107 440 aaPredicted RBP8.34□□□□□ -1.07
KSH1YNL024C-A PRP43P53131 767 aaKnown RBP8.34□□□□□ -1.07
KSH1YNL024C-A YBL029C-AQ3E756 94 aa8.34□□□□□ -1.07
KSH1YNL024C-A RTF1P53064 558 aa8.33□□□□□ -1.08
KSH1YNL024C-A VPS27P40343 622 aaKnown RBP8.32□□□□□ -1.08
KSH1YNL024C-A NST1P53935 1240 aa8.32□□□□□ -1.08
KSH1YNL024C-A CDC45Q08032 650 aa8.32□□□□□ -1.08
KSH1YNL024C-A ADE6P38972 1358 aaKnown RBP8.32□□□□□ -1.08
KSH1YNL024C-A YEF3P16521 1044 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms