RNA–Protein interactions for RNA: YMR292W

GOT1, Transcript of Homodimeric protein that is packaged into COPII vesicles, yeast

Gene GOT1, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GOT1	YMR292W	STH1	P32597	1359 aa		4.95	□□□□□ -1.62
GOT1	YMR292W	PRE3	P38624	215 aa		4.95	□□□□□ -1.62
GOT1	YMR292W	VTH1	P40438	1549 aa		4.95	□□□□□ -1.62
GOT1	YMR292W	VTH2	P40890	1549 aa		4.95	□□□□□ -1.62
GOT1	YMR292W	RPA190	P10964	1664 aa	Known RBP	4.94	□□□□□ -1.62
GOT1	YMR292W	BCK2	P33306	851 aa		4.94	□□□□□ -1.62
GOT1	YMR292W	PTC3	P34221	468 aa	Known RBP	4.94	□□□□□ -1.62
GOT1	YMR292W	TSC11	P40061	1430 aa		4.94	□□□□□ -1.62
GOT1	YMR292W	ULS1	Q08562	1619 aa		4.94	□□□□□ -1.62
GOT1	YMR292W	PDR15	Q04182	1529 aa	Known RBP	4.92	□□□□□ -1.62
GOT1	YMR292W	SNT2	P53127	1403 aa		4.91	□□□□□ -1.62
GOT1	YMR292W	TRM732	Q03496	1420 aa		4.91	□□□□□ -1.62
GOT1	YMR292W	COQ8	P27697	501 aa		4.91	□□□□□ -1.62
GOT1	YMR292W	EDS1	P38073	919 aa		4.91	□□□□□ -1.62
GOT1	YMR292W	NOP53	Q12080	455 aa	Known RBP	4.91	□□□□□ -1.62
GOT1	YMR292W	IFH1	P39520	1085 aa		4.9	□□□□□ -1.63
GOT1	YMR292W	PML39	Q03760	334 aa		4.9	□□□□□ -1.63
GOT1	YMR292W	TAF7	Q05021	590 aa		4.9	□□□□□ -1.63
GOT1	YMR292W	RPO21	P04050	1733 aa	Known RBP	4.89	□□□□□ -1.63
GOT1	YMR292W	GEA1	P47102	1408 aa	Predicted RBP	4.89	□□□□□ -1.63
GOT1	YMR292W	ELP4	Q02884	456 aa	Known RBP	4.88	□□□□□ -1.63
GOT1	YMR292W	NTE1	Q04958	1679 aa		4.88	□□□□□ -1.63
GOT1	YMR292W	TY3B-G	Q99315	1547 aa		4.87	□□□□□ -1.63
GOT1	YMR292W	YRF1-1	P0CX20	1796 aa		4.86	□□□□□ -1.63
GOT1	YMR292W	YRF1-5	P0CX21	1796 aa		4.86	□□□□□ -1.63
GOT1	YMR292W	YRF1-8	P0CX22	1796 aa		4.86	□□□□□ -1.63
GOT1	YMR292W	AI4	P03878	556 aa		4.86	□□□□□ -1.63
GOT1	YMR292W	MPH3	P0CE00	602 aa		4.85	□□□□□ -1.63
GOT1	YMR292W	NST1	P53935	1240 aa		4.85	□□□□□ -1.63
GOT1	YMR292W	NUP159	P40477	1460 aa		4.84	□□□□□ -1.63
GOT1	YMR292W	IKI3	Q06706	1349 aa	Known RBP	4.84	□□□□□ -1.63
GOT1	YMR292W	XDJ1	P39102	459 aa		4.84	□□□□□ -1.63
GOT1	YMR292W	ARH1	P48360	493 aa		4.84	□□□□□ -1.63
GOT1	YMR292W	PEX29	Q03370	554 aa		4.84	□□□□□ -1.63
GOT1	YMR292W	YBT1	P32386	1661 aa		4.83	□□□□□ -1.64
GOT1	YMR292W	IRC20	Q06554	1556 aa		4.83	□□□□□ -1.64
GOT1	YMR292W	SSM4	P40318	1319 aa		4.83	□□□□□ -1.64
GOT1	YMR292W	VRP1	P37370	817 aa		4.83	□□□□□ -1.64
GOT1	YMR292W	NUP170	P38181	1502 aa		4.82	□□□□□ -1.64
GOT1	YMR292W	GEA2	P39993	1459 aa	Known RBP	4.82	□□□□□ -1.64
GOT1	YMR292W	SOL3	P38858	249 aa		4.82	□□□□□ -1.64
GOT1	YMR292W	RTT106	P40161	455 aa		4.82	□□□□□ -1.64
GOT1	YMR292W	VPS15	P22219	1454 aa		4.81	□□□□□ -1.64
GOT1	YMR292W	SPO14	P36126	1683 aa		4.81	□□□□□ -1.64
GOT1	YMR292W	SPT23	P35210	1082 aa		4.81	□□□□□ -1.64
GOT1	YMR292W	MID1	P41821	548 aa		4.81	□□□□□ -1.64
GOT1	YMR292W	MET5	P47169	1442 aa		4.8	□□□□□ -1.64
GOT1	YMR292W	YGR273C	P53329	174 aa		4.8	□□□□□ -1.64
GOT1	YMR292W	GDB1	Q06625	1536 aa		4.79	□□□□□ -1.64
GOT1	YMR292W	HAP5	Q02516	242 aa		4.79	□□□□□ -1.64
GOT1	YMR292W	MET10	P39692	1035 aa		4.78	□□□□□ -1.64
GOT1	YMR292W	YDR344C	Q05510	147 aa		4.78	□□□□□ -1.64
GOT1	YMR292W	PDR12	Q02785	1511 aa		4.77	□□□□□ -1.65
GOT1	YMR292W	CAT8	P39113	1433 aa		4.77	□□□□□ -1.65
GOT1	YMR292W	PDR10	P51533	1564 aa		4.77	□□□□□ -1.65
GOT1	YMR292W	NUP157	P40064	1391 aa	Known RBP	4.77	□□□□□ -1.65
GOT1	YMR292W	BUD3	P25558	1636 aa		4.76	□□□□□ -1.65
GOT1	YMR292W	ARO1	P08566	1588 aa	Known RBP	4.76	□□□□□ -1.65
GOT1	YMR292W	BNI4	P53858	892 aa		4.76	□□□□□ -1.65
GOT1	YMR292W	ILV3	P39522	585 aa	Known RBP	4.75	□□□□□ -1.65
GOT1	YMR292W	PTC2	P39966	464 aa	Known RBP	4.74	□□□□□ -1.65
GOT1	YMR292W	CKB1	P43639	278 aa		4.74	□□□□□ -1.65
GOT1	YMR292W	MPC54	Q08550	464 aa		4.74	□□□□□ -1.65
GOT1	YMR292W	YML082W	Q04533	649 aa	Known RBP	4.73	□□□□□ -1.65
GOT1	YMR292W	DPS1	P04802	557 aa	Known RBP	4.72	□□□□□ -1.65
GOT1	YMR292W	SLI15	P38283	698 aa		4.72	□□□□□ -1.65
GOT1	YMR292W	SET1	P38827	1080 aa	Known RBP	4.72	□□□□□ -1.65
GOT1	YMR292W	DPL1	Q05567	589 aa		4.72	□□□□□ -1.65
GOT1	YMR292W	YSP2	Q06681	1438 aa		4.72	□□□□□ -1.65
GOT1	YMR292W	NMA111	P53920	997 aa		4.71	□□□□□ -1.66
GOT1	YMR292W	SRB8	P25648	1427 aa		4.71	□□□□□ -1.66
GOT1	YMR292W	SEC7	P11075	2009 aa	Known RBP	4.7	□□□□□ -1.66
GOT1	YMR292W	IQG1	Q12280	1495 aa		4.69	□□□□□ -1.66
GOT1	YMR292W	KEX1	P09620	729 aa		4.69	□□□□□ -1.66
GOT1	YMR292W	RGA1	P39083	1007 aa		4.69	□□□□□ -1.66
GOT1	YMR292W	BNI1	P41832	1953 aa		4.68	□□□□□ -1.66
GOT1	YMR292W	RPP1B	P10622	106 aa	Known RBP	4.68	□□□□□ -1.66
GOT1	YMR292W	ISU2	Q12056	156 aa		4.68	□□□□□ -1.66
GOT1	YMR292W	LTE1	P07866	1435 aa		4.68	□□□□□ -1.66
GOT1	YMR292W	DOP1	Q03921	1698 aa		4.65	□□□□□ -1.66
GOT1	YMR292W	ITT1	Q04638	464 aa		4.65	□□□□□ -1.67
GOT1	YMR292W	BUD21	Q08492	214 aa	Predicted RBP	4.65	□□□□□ -1.67
GOT1	YMR292W	GCN2	P15442	1659 aa		4.64	□□□□□ -1.67
GOT1	YMR292W	RAD54	P32863	898 aa		4.64	□□□□□ -1.67
GOT1	YMR292W	UBP14	P38237	781 aa	Known RBP	4.64	□□□□□ -1.67
GOT1	YMR292W	YLR326W	Q06170	240 aa	Known RBP	4.64	□□□□□ -1.67
GOT1	YMR292W	BNR1	P40450	1375 aa		4.64	□□□□□ -1.67
GOT1	YMR292W	MMS1	Q06211	1407 aa		4.63	□□□□□ -1.67
GOT1	YMR292W	VHR2	P40041	505 aa		4.63	□□□□□ -1.67
GOT1	YMR292W	DRS2	P39524	1355 aa		4.63	□□□□□ -1.67
GOT1	YMR292W	CHC1	P22137	1653 aa	Known RBP	4.62	□□□□□ -1.67
GOT1	YMR292W	CDC73	Q06697	393 aa		4.62	□□□□□ -1.67
GOT1	YMR292W	KIC1	P38692	1080 aa		4.61	□□□□□ -1.67
GOT1	YMR292W	RAM1	P22007	431 aa		4.6	□□□□□ -1.67
GOT1	YMR292W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
GOT1	YMR292W	SAS4	Q04003	481 aa		4.6	□□□□□ -1.67
GOT1	YMR292W	GYP1	Q08484	637 aa		4.6	□□□□□ -1.67
GOT1	YMR292W	TRM3	Q07527	1436 aa		4.6	□□□□□ -1.67
GOT1	YMR292W	YOR093C	Q12275	1648 aa		4.6	□□□□□ -1.67
GOT1	YMR292W	VMR1	P38735	1592 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms