RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YDL129WQ07555 291 aa7.75□□□□□ -1.17
CUS1YMR240C TIF1P10081 395 aaKnown RBP7.74□□□□□ -1.17
CUS1YMR240C ARG8P18544 423 aa7.74□□□□□ -1.17
CUS1YMR240C SLY41P22215 453 aa7.74□□□□□ -1.17
CUS1YMR240C BIO2P32451 375 aa7.73□□□□□ -1.17
CUS1YMR240C RSC30P38781 883 aa7.73□□□□□ -1.17
CUS1YMR240C LAM6Q08001 693 aa7.73□□□□□ -1.17
CUS1YMR240C NUD1P32336 851 aa7.71□□□□□ -1.18
CUS1YMR240C SPT5P27692 1063 aaKnown RBP7.7□□□□□ -1.18
CUS1YMR240C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
CUS1YMR240C HAP5Q02516 242 aa7.69□□□□□ -1.18
CUS1YMR240C SUB2Q07478 446 aaKnown RBP7.69□□□□□ -1.18
CUS1YMR240C SUP45P12385 437 aaKnown RBP7.68□□□□□ -1.18
CUS1YMR240C KEX2P13134 814 aa7.68□□□□□ -1.18
CUS1YMR240C ARH1P48360 493 aa7.68□□□□□ -1.18
CUS1YMR240C ERG12P07277 443 aa7.67□□□□□ -1.18
CUS1YMR240C MAK16P10962 306 aaPredicted RBP7.67□□□□□ -1.18
CUS1YMR240C RTG2P32608 588 aaKnown RBP7.67□□□□□ -1.18
CUS1YMR240C NPL4P33755 580 aa7.67□□□□□ -1.18
CUS1YMR240C FKH1P40466 484 aa7.67□□□□□ -1.18
CUS1YMR240C PUS6P53294 404 aa7.67□□□□□ -1.18
CUS1YMR240C YNL108CP53929 270 aa7.67□□□□□ -1.18
CUS1YMR240C PDR1P12383 1068 aa7.66□□□□□ -1.18
CUS1YMR240C TRM1P15565 570 aaKnown RBP7.66□□□□□ -1.18
CUS1YMR240C SSA4P22202 642 aaKnown RBP7.66□□□□□ -1.18
CUS1YMR240C SSA1P10591 642 aaKnown RBP7.65□□□□□ -1.18
CUS1YMR240C ERF2Q06551 359 aa7.65□□□□□ -1.18
CUS1YMR240C YPR204WQ08995 1032 aa7.65□□□□□ -1.18
CUS1YMR240C BUD31P25337 157 aaPredicted RBP7.63□□□□□ -1.19
CUS1YMR240C TTI1P36097 1038 aa7.63□□□□□ -1.19
CUS1YMR240C SAP30P38429 201 aa7.63□□□□□ -1.19
CUS1YMR240C STR2P47164 639 aa7.63□□□□□ -1.19
CUS1YMR240C ISM1P48526 1002 aa7.63□□□□□ -1.19
CUS1YMR240C BNI4P53858 892 aa7.62□□□□□ -1.19
CUS1YMR240C YDJ1P25491 409 aaKnown RBP7.61□□□□□ -1.19
CUS1YMR240C GEF1P37020 779 aa7.61□□□□□ -1.19
CUS1YMR240C NAF1P53919 492 aaKnown RBP7.61□□□□□ -1.19
CUS1YMR240C ENO2P00925 437 aaKnown RBP7.6□□□□□ -1.19
CUS1YMR240C TBF1Q02457 562 aa7.6□□□□□ -1.19
CUS1YMR240C RAM1P22007 431 aa7.59□□□□□ -1.19
CUS1YMR240C CPS1P27614 576 aa7.59□□□□□ -1.19
CUS1YMR240C GCD11P32481 527 aaKnown RBP7.58□□□□□ -1.2
CUS1YMR240C SPT23P35210 1082 aa7.58□□□□□ -1.2
CUS1YMR240C SIS2P36024 562 aa7.58□□□□□ -1.2
CUS1YMR240C ELP4Q02884 456 aaKnown RBP7.58□□□□□ -1.2
CUS1YMR240C YDR344CQ05510 147 aa7.58□□□□□ -1.2
CUS1YMR240C MRX10Q05648 414 aa7.58□□□□□ -1.2
CUS1YMR240C AIR2Q12476 344 aaKnown RBP7.58□□□□□ -1.2
CUS1YMR240C TY1A-DR4O74302 440 aa7.57□□□□□ -1.2
CUS1YMR240C ENO1P00924 437 aaKnown RBP7.57□□□□□ -1.2
CUS1YMR240C TY1A-HP0C2I4 478 aaKnown RBP7.57□□□□□ -1.2
CUS1YMR240C TY1A-AP0CX57 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-PR1P0CX58 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-ORP0CX59 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-PR2P0CX60 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-DR5P0CX65 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-ER2P0CX66 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-GR3P0CX67 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-LR1P0CX68 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-MR2P0CX69 440 aa7.57□□□□□ -1.2
CUS1YMR240C YPP1P46951 817 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-JR2P47099 440 aa7.57□□□□□ -1.2
CUS1YMR240C RIM21P48565 533 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-DR1Q03856 440 aa7.57□□□□□ -1.2
CUS1YMR240C AGE1Q04412 482 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-ML1Q04706 440 aaKnown RBP7.57□□□□□ -1.2
CUS1YMR240C TY1A-BRQ12217 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-NL2Q12470 440 aa7.57□□□□□ -1.2
CUS1YMR240C TY1A-GR2Q12485 440 aa7.57□□□□□ -1.2
CUS1YMR240C BUD20Q08004 166 aaPredicted RBP7.56□□□□□ -1.2
CUS1YMR240C SEC2P17065 759 aa7.55□□□□□ -1.2
CUS1YMR240C TUB4P53378 473 aa7.55□□□□□ -1.2
CUS1YMR240C RPA14P50106 137 aa7.54□□□□□ -1.2
CUS1YMR240C YDL206WQ12424 762 aa7.54□□□□□ -1.2
CUS1YMR240C PTC2P39966 464 aaKnown RBP7.53□□□□□ -1.2
CUS1YMR240C MCM16Q12262 181 aa7.53□□□□□ -1.2
CUS1YMR240C YPR097WQ06839 1073 aa7.52□□□□□ -1.2
CUS1YMR240C YML082WQ04533 649 aaKnown RBP7.52□□□□□ -1.21
CUS1YMR240C NOB1Q08444 459 aaKnown RBP7.52□□□□□ -1.21
CUS1YMR240C PRT1P06103 763 aaKnown RBP7.51□□□□□ -1.21
CUS1YMR240C ALR1Q08269 859 aa7.51□□□□□ -1.21
CUS1YMR240C YPR015CQ12531 247 aa7.51□□□□□ -1.21
CUS1YMR240C PEP12P32854 288 aa7.5□□□□□ -1.21
CUS1YMR240C SLX8P40072 274 aa7.5□□□□□ -1.21
CUS1YMR240C PUP1P25043 261 aa7.49□□□□□ -1.21
CUS1YMR240C PRE3P38624 215 aa7.49□□□□□ -1.21
CUS1YMR240C RDS2P19541 446 aaKnown RBP7.48□□□□□ -1.21
CUS1YMR240C PAT1P25644 796 aaKnown RBP7.48□□□□□ -1.21
CUS1YMR240C PAC1P39946 494 aaKnown RBP7.48□□□□□ -1.21
CUS1YMR240C MRX12P47084 519 aa7.48□□□□□ -1.21
CUS1YMR240C KXD1P53158 218 aa7.48□□□□□ -1.21
CUS1YMR240C RPL34AP87262 121 aaPredicted RBP7.48□□□□□ -1.21
CUS1YMR240C YML020WQ03722 664 aa7.48□□□□□ -1.21
CUS1YMR240C BMT6Q12291 365 aa7.48□□□□□ -1.21
CUS1YMR240C PDC1P06169 563 aaKnown RBP7.47□□□□□ -1.21
CUS1YMR240C TGL4P36165 910 aa7.47□□□□□ -1.21
CUS1YMR240C NOP8Q08287 484 aaPredicted RBP7.47□□□□□ -1.21
CUS1YMR240C TEC1P18412 486 aa7.46□□□□□ -1.22
CUS1YMR240C FIG4P42837 879 aa7.46□□□□□ -1.22
CUS1YMR240C EMP47P43555 445 aa7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms