RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C YPR015CQ12531 247 aa8.18□□□□□ -1.1
ATG16YMR159C GLN1P32288 370 aaKnown RBP8.17□□□□□ -1.1
ATG16YMR159C YNL115CP53925 644 aa8.17□□□□□ -1.1
ATG16YMR159C HPC2Q01448 625 aa8.17□□□□□ -1.1
ATG16YMR159C BUD20Q08004 166 aaPredicted RBP8.16□□□□□ -1.1
ATG16YMR159C MMP1Q12372 583 aa8.15□□□□□ -1.1
ATG16YMR159C KEX2P13134 814 aa8.14□□□□□ -1.11
ATG16YMR159C KTR1P27810 393 aaKnown RBP8.14□□□□□ -1.11
ATG16YMR159C GCD11P32481 527 aaKnown RBP8.12□□□□□ -1.11
ATG16YMR159C BCK2P33306 851 aa8.12□□□□□ -1.11
ATG16YMR159C TYW1Q08960 810 aaKnown RBP8.12□□□□□ -1.11
ATG16YMR159C TY1A-DR4O74302 440 aa8.11□□□□□ -1.11
ATG16YMR159C PRT1P06103 763 aaKnown RBP8.11□□□□□ -1.11
ATG16YMR159C TY1A-HP0C2I4 478 aaKnown RBP8.11□□□□□ -1.11
ATG16YMR159C TY1A-AP0CX57 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-PR1P0CX58 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-ORP0CX59 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-PR2P0CX60 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-DR5P0CX65 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-ER2P0CX66 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-GR3P0CX67 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-LR1P0CX68 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-MR2P0CX69 440 aa8.11□□□□□ -1.11
ATG16YMR159C VRP1P37370 817 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-JR2P47099 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-DR1Q03856 440 aa8.11□□□□□ -1.11
ATG16YMR159C SAS4Q04003 481 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-ML1Q04706 440 aaKnown RBP8.11□□□□□ -1.11
ATG16YMR159C ERF2Q06551 359 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-BRQ12217 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-NL2Q12470 440 aa8.11□□□□□ -1.11
ATG16YMR159C TY1A-GR2Q12485 440 aa8.11□□□□□ -1.11
ATG16YMR159C SEC2P17065 759 aa8.1□□□□□ -1.11
ATG16YMR159C SLY41P22215 453 aa8.1□□□□□ -1.11
ATG16YMR159C SCJ1P25303 377 aa8.1□□□□□ -1.11
ATG16YMR159C HGH1P48362 394 aaKnown RBP8.1□□□□□ -1.11
ATG16YMR159C ESS1P22696 170 aa8.08□□□□□ -1.12
ATG16YMR159C DMA2P53924 522 aa8.08□□□□□ -1.12
ATG16YMR159C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
ATG16YMR159C BRL1P38770 471 aa8.06□□□□□ -1.12
ATG16YMR159C GYP1Q08484 637 aa8.06□□□□□ -1.12
ATG16YMR159C PUS6P53294 404 aa8.05□□□□□ -1.12
ATG16YMR159C TFB3Q03290 321 aa8.05□□□□□ -1.12
ATG16YMR159C AGE1Q04412 482 aa8.05□□□□□ -1.12
ATG16YMR159C XDJ1P39102 459 aa8.04□□□□□ -1.12
ATG16YMR159C PKH3Q03306 898 aaPredicted RBP8.04□□□□□ -1.12
ATG16YMR159C LAM6Q08001 693 aa8.04□□□□□ -1.12
ATG16YMR159C PAT1P25644 796 aaKnown RBP8.03□□□□□ -1.12
ATG16YMR159C YJU3P28321 313 aa8.03□□□□□ -1.12
ATG16YMR159C RSC30P38781 883 aa8.03□□□□□ -1.12
ATG16YMR159C TUB4P53378 473 aa8.03□□□□□ -1.12
ATG16YMR159C RAD59Q12223 238 aa8.02□□□□□ -1.13
ATG16YMR159C TRM1P15565 570 aaKnown RBP8□□□□□ -1.13
ATG16YMR159C MRF1P30775 413 aaPredicted RBP8□□□□□ -1.13
ATG16YMR159C ARG8P18544 423 aa7.99□□□□□ -1.13
ATG16YMR159C SPT16P32558 1035 aaKnown RBP7.99□□□□□ -1.13
ATG16YMR159C RRN7P40992 514 aa7.99□□□□□ -1.13
ATG16YMR159C CSE4P36012 229 aa7.98□□□□□ -1.13
ATG16YMR159C TBF1Q02457 562 aa7.98□□□□□ -1.13
ATG16YMR159C PAC1P39946 494 aaKnown RBP7.97□□□□□ -1.13
ATG16YMR159C RPA14P50106 137 aa7.96□□□□□ -1.14
ATG16YMR159C PKC1P24583 1151 aa7.95□□□□□ -1.14
ATG16YMR159C KXD1P53158 218 aa7.94□□□□□ -1.14
ATG16YMR159C YPR097WQ06839 1073 aa7.94□□□□□ -1.14
ATG16YMR159C YDL206WQ12424 762 aa7.94□□□□□ -1.14
ATG16YMR159C SDH2P21801 266 aa7.93□□□□□ -1.14
ATG16YMR159C TPD3P31383 635 aa7.93□□□□□ -1.14
ATG16YMR159C ERG12P07277 443 aa7.92□□□□□ -1.14
ATG16YMR159C YBL036CP38197 257 aa7.92□□□□□ -1.14
ATG16YMR159C ALR1Q08269 859 aa7.92□□□□□ -1.14
ATG16YMR159C MOD5P07884 428 aa7.91□□□□□ -1.14
ATG16YMR159C MAK16P10962 306 aaPredicted RBP7.91□□□□□ -1.14
ATG16YMR159C TAF7Q05021 590 aa7.91□□□□□ -1.14
ATG16YMR159C PDC1P06169 563 aaKnown RBP7.9□□□□□ -1.14
ATG16YMR159C HXT10P43581 546 aa7.9□□□□□ -1.14
ATG16YMR159C YEL077CQ3E7X8 1277 aa7.89□□□□□ -1.15
ATG16YMR159C SPT5P27692 1063 aaKnown RBP7.88□□□□□ -1.15
ATG16YMR159C NAF1P53919 492 aaKnown RBP7.87□□□□□ -1.15
ATG16YMR159C YJL007CP47080 104 aa7.86□□□□□ -1.15
ATG16YMR159C AMS1P22855 1083 aa7.85□□□□□ -1.15
ATG16YMR159C RRD1P40454 393 aaKnown RBP7.85□□□□□ -1.15
ATG16YMR159C BIM1P40013 344 aa7.84□□□□□ -1.15
ATG16YMR159C BIO2P32451 375 aa7.82□□□□□ -1.16
ATG16YMR159C CST6P40535 587 aa7.82□□□□□ -1.16
ATG16YMR159C BDP1P46678 594 aa7.82□□□□□ -1.16
ATG16YMR159C SUP45P12385 437 aaKnown RBP7.81□□□□□ -1.16
ATG16YMR159C ATG32P40458 529 aa7.8□□□□□ -1.16
ATG16YMR159C RLF2Q12495 606 aa7.8□□□□□ -1.16
ATG16YMR159C VAC17P25591 423 aa7.78□□□□□ -1.16
ATG16YMR159C FIG4P42837 879 aa7.78□□□□□ -1.16
ATG16YMR159C DPS1P04802 557 aaKnown RBP7.77□□□□□ -1.17
ATG16YMR159C TIF1P10081 395 aaKnown RBP7.77□□□□□ -1.17
ATG16YMR159C TEC1P18412 486 aa7.77□□□□□ -1.17
ATG16YMR159C YNL108CP53929 270 aa7.77□□□□□ -1.17
ATG16YMR159C FRK1Q03002 865 aaPredicted RBP7.77□□□□□ -1.17
ATG16YMR159C RAS1P01119 309 aa7.76□□□□□ -1.17
ATG16YMR159C YDJ1P25491 409 aaKnown RBP7.76□□□□□ -1.17
ATG16YMR159C RPL34BP40525 121 aaKnown RBP7.76□□□□□ -1.17
ATG16YMR159C YPP1P46951 817 aa7.76□□□□□ -1.17
ATG16YMR159C HED1Q03937 162 aa7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms