RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C NUD1P32336 851 aa8.92□□□□□ -0.98
CTF18YMR078C SAP30P38429 201 aa8.92□□□□□ -0.98
CTF18YMR078C ERF2Q06551 359 aa8.92□□□□□ -0.98
CTF18YMR078C AIR2Q12476 344 aaKnown RBP8.92□□□□□ -0.98
CTF18YMR078C RSC30P38781 883 aa8.91□□□□□ -0.98
CTF18YMR078C ARH1P48360 493 aa8.91□□□□□ -0.98
CTF18YMR078C HAP5Q02516 242 aa8.91□□□□□ -0.98
CTF18YMR078C KEX2P13134 814 aa8.9□□□□□ -0.98
CTF18YMR078C SLY41P22215 453 aa8.9□□□□□ -0.98
CTF18YMR078C BIO2P32451 375 aa8.9□□□□□ -0.98
CTF18YMR078C YNL115CP53925 644 aa8.9□□□□□ -0.98
CTF18YMR078C RTF1P53064 558 aa8.89□□□□□ -0.99
CTF18YMR078C STR2P47164 639 aa8.89□□□□□ -0.99
CTF18YMR078C YBL036CP38197 257 aa8.88□□□□□ -0.99
CTF18YMR078C RAM1P22007 431 aa8.88□□□□□ -0.99
CTF18YMR078C ISM1P48526 1002 aa8.86□□□□□ -0.99
CTF18YMR078C ARG8P18544 423 aa8.86□□□□□ -0.99
CTF18YMR078C TIF1P10081 395 aaKnown RBP8.85□□□□□ -0.99
CTF18YMR078C ERG12P07277 443 aa8.84□□□□□ -0.99
CTF18YMR078C TY1A-DR4O74302 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-HP0C2I4 478 aaKnown RBP8.83□□□□□ -1
CTF18YMR078C TY1A-AP0CX57 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-PR1P0CX58 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-ORP0CX59 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-PR2P0CX60 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-DR5P0CX65 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-ER2P0CX66 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-GR3P0CX67 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-LR1P0CX68 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-MR2P0CX69 440 aa8.83□□□□□ -1
CTF18YMR078C SEC2P17065 759 aa8.83□□□□□ -1
CTF18YMR078C CSE4P36012 229 aa8.83□□□□□ -1
CTF18YMR078C TY1A-JR2P47099 440 aa8.83□□□□□ -1
CTF18YMR078C BNI4P53858 892 aa8.83□□□□□ -1
CTF18YMR078C TY1A-DR1Q03856 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-ML1Q04706 440 aaKnown RBP8.83□□□□□ -1
CTF18YMR078C TY1A-BRQ12217 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-NL2Q12470 440 aa8.83□□□□□ -1
CTF18YMR078C TY1A-GR2Q12485 440 aa8.83□□□□□ -1
CTF18YMR078C TRM1P15565 570 aaKnown RBP8.82□□□□□ -1
CTF18YMR078C LAM6Q08001 693 aa8.81□□□□□ -1
CTF18YMR078C YPR015CQ12531 247 aa8.81□□□□□ -1
CTF18YMR078C AGE1Q04412 482 aa8.81□□□□□ -1
CTF18YMR078C YNL108CP53929 270 aa8.8□□□□□ -1
CTF18YMR078C BUD20Q08004 166 aaPredicted RBP8.8□□□□□ -1
CTF18YMR078C MAK16P10962 306 aaPredicted RBP8.78□□□□□ -1
CTF18YMR078C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
CTF18YMR078C ELP4Q02884 456 aaKnown RBP8.78□□□□□ -1
CTF18YMR078C SUP45P12385 437 aaKnown RBP8.78□□□□□ -1
CTF18YMR078C NPL4P33755 580 aa8.78□□□□□ -1
CTF18YMR078C YDJ1P25491 409 aaKnown RBP8.77□□□□□ -1.01
CTF18YMR078C PUS6P53294 404 aa8.77□□□□□ -1.01
CTF18YMR078C SPT23P35210 1082 aa8.76□□□□□ -1.01
CTF18YMR078C TUB4P53378 473 aa8.76□□□□□ -1.01
CTF18YMR078C GCD11P32481 527 aaKnown RBP8.74□□□□□ -1.01
CTF18YMR078C RTG2P32608 588 aaKnown RBP8.74□□□□□ -1.01
CTF18YMR078C RPL34BP40525 121 aaKnown RBP8.74□□□□□ -1.01
CTF18YMR078C SUB2Q07478 446 aaKnown RBP8.73□□□□□ -1.01
CTF18YMR078C ENO2P00925 437 aaKnown RBP8.73□□□□□ -1.01
CTF18YMR078C YPR204WQ08995 1032 aa8.73□□□□□ -1.01
CTF18YMR078C PRE3P38624 215 aa8.72□□□□□ -1.01
CTF18YMR078C PTC2P39966 464 aaKnown RBP8.72□□□□□ -1.01
CTF18YMR078C BMT6Q12291 365 aa8.72□□□□□ -1.01
CTF18YMR078C YDL206WQ12424 762 aa8.72□□□□□ -1.01
CTF18YMR078C SPT5P27692 1063 aaKnown RBP8.71□□□□□ -1.02
CTF18YMR078C YML082WQ04533 649 aaKnown RBP8.71□□□□□ -1.02
CTF18YMR078C PAC1P39946 494 aaKnown RBP8.69□□□□□ -1.02
CTF18YMR078C TBF1Q02457 562 aa8.69□□□□□ -1.02
CTF18YMR078C TTI1P36097 1038 aa8.69□□□□□ -1.02
CTF18YMR078C MRX10Q05648 414 aa8.69□□□□□ -1.02
CTF18YMR078C SIS1P25294 352 aaKnown RBP8.68□□□□□ -1.02
CTF18YMR078C RIM21P48565 533 aa8.68□□□□□ -1.02
CTF18YMR078C ENO1P00924 437 aaKnown RBP8.68□□□□□ -1.02
CTF18YMR078C PRT1P06103 763 aaKnown RBP8.67□□□□□ -1.02
CTF18YMR078C CPS1P27614 576 aa8.67□□□□□ -1.02
CTF18YMR078C NAF1P53919 492 aaKnown RBP8.66□□□□□ -1.02
CTF18YMR078C RPA14P50106 137 aa8.65□□□□□ -1.02
CTF18YMR078C CHL1P22516 861 aaPredicted RBP8.65□□□□□ -1.03
CTF18YMR078C YJL171CP46992 396 aa8.65□□□□□ -1.03
CTF18YMR078C RRN7P40992 514 aa8.64□□□□□ -1.03
CTF18YMR078C SSA4P22202 642 aaKnown RBP8.64□□□□□ -1.03
CTF18YMR078C YPR097WQ06839 1073 aa8.64□□□□□ -1.03
CTF18YMR078C PDC1P06169 563 aaKnown RBP8.62□□□□□ -1.03
CTF18YMR078C MCM16Q12262 181 aa8.62□□□□□ -1.03
CTF18YMR078C RDS2P19541 446 aaKnown RBP8.62□□□□□ -1.03
CTF18YMR078C SSA1P10591 642 aaKnown RBP8.61□□□□□ -1.03
CTF18YMR078C NOB1Q08444 459 aaKnown RBP8.61□□□□□ -1.03
CTF18YMR078C ISF1P32488 338 aa8.59□□□□□ -1.03
CTF18YMR078C FIG4P42837 879 aa8.59□□□□□ -1.03
CTF18YMR078C YPR084WQ06821 456 aa8.59□□□□□ -1.03
CTF18YMR078C ALR1Q08269 859 aa8.59□□□□□ -1.03
CTF18YMR078C PEP12P32854 288 aa8.57□□□□□ -1.04
CTF18YMR078C MOD5P07884 428 aa8.57□□□□□ -1.04
CTF18YMR078C PUP1P25043 261 aa8.57□□□□□ -1.04
CTF18YMR078C GEF1P37020 779 aa8.57□□□□□ -1.04
CTF18YMR078C EMP47P43555 445 aa8.56□□□□□ -1.04
CTF18YMR078C YPP1P46951 817 aa8.56□□□□□ -1.04
CTF18YMR078C HXT10P43581 546 aa8.56□□□□□ -1.04
CTF18YMR078C YML083CQ04526 418 aa8.55□□□□□ -1.04
CTF18YMR078C TEC1P18412 486 aa8.54□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms