RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C YNL108CP53929 270 aa10.62□□□□□ -0.71
ATG17YLR423C ISU2Q12056 156 aa10.61□□□□□ -0.71
ATG17YLR423C IOC2Q12072 812 aa10.61□□□□□ -0.71
ATG17YLR423C GEF1P37020 779 aa10.59□□□□□ -0.71
ATG17YLR423C TFG1P41895 735 aaPredicted RBP10.59□□□□□ -0.71
ATG17YLR423C RTG1P32607 177 aa10.58□□□□□ -0.72
ATG17YLR423C YNL115CP53925 644 aa10.58□□□□□ -0.72
ATG17YLR423C LAM6Q08001 693 aa10.57□□□□□ -0.72
ATG17YLR423C RTF1P53064 558 aa10.56□□□□□ -0.72
ATG17YLR423C NMA111P53920 997 aa10.56□□□□□ -0.72
ATG17YLR423C LDB19Q12502 818 aa10.56□□□□□ -0.72
ATG17YLR423C CPS1P27614 576 aa10.55□□□□□ -0.72
ATG17YLR423C SEC61P32915 480 aa10.55□□□□□ -0.72
ATG17YLR423C SPT5P27692 1063 aaKnown RBP10.53□□□□□ -0.72
ATG17YLR423C NPL4P33755 580 aa10.53□□□□□ -0.72
ATG17YLR423C NUD1P32336 851 aa10.51□□□□□ -0.73
ATG17YLR423C TTI1P36097 1038 aa10.51□□□□□ -0.73
ATG17YLR423C KEX2P13134 814 aa10.5□□□□□ -0.73
ATG17YLR423C TBF1Q02457 562 aa10.5□□□□□ -0.73
ATG17YLR423C MAK16P10962 306 aaPredicted RBP10.49□□□□□ -0.73
ATG17YLR423C SUP45P12385 437 aaKnown RBP10.49□□□□□ -0.73
ATG17YLR423C TRM1P15565 570 aaKnown RBP10.49□□□□□ -0.73
ATG17YLR423C YDJ1P25491 409 aaKnown RBP10.48□□□□□ -0.73
ATG17YLR423C RSC30P38781 883 aa10.48□□□□□ -0.73
ATG17YLR423C SLX8P40072 274 aa10.48□□□□□ -0.73
ATG17YLR423C PUS6P53294 404 aa10.48□□□□□ -0.73
ATG17YLR423C RPL34AP87262 121 aaPredicted RBP10.48□□□□□ -0.73
ATG17YLR423C ENO2P00925 437 aaKnown RBP10.47□□□□□ -0.73
ATG17YLR423C NCR1Q12200 1170 aa10.47□□□□□ -0.73
ATG17YLR423C BUB1P41695 1021 aaKnown RBP RIP-Chip data10.46□□□□□ -0.73not detected
ATG17YLR423C YML020WQ03722 664 aa10.46□□□□□ -0.73
ATG17YLR423C YDL129WQ07555 291 aa10.46□□□□□ -0.73
ATG17YLR423C SIS2P36024 562 aa10.44□□□□□ -0.74
ATG17YLR423C ENO1P00924 437 aaKnown RBP10.43□□□□□ -0.74
ATG17YLR423C HAP5Q02516 242 aa10.42□□□□□ -0.74
ATG17YLR423C ERF2Q06551 359 aa10.42□□□□□ -0.74
ATG17YLR423C PDR1P12383 1068 aa10.41□□□□□ -0.74
ATG17YLR423C YPP1P46951 817 aa10.41□□□□□ -0.74
ATG17YLR423C NAF1P53919 492 aaKnown RBP10.39□□□□□ -0.75
ATG17YLR423C GCD11P32481 527 aaKnown RBP10.38□□□□□ -0.75
ATG17YLR423C RIM21P48565 533 aa10.38□□□□□ -0.75
ATG17YLR423C NOB1Q08444 459 aaKnown RBP10.37□□□□□ -0.75
ATG17YLR423C ISM1P48526 1002 aa10.36□□□□□ -0.75
ATG17YLR423C MRX10Q05648 414 aa10.36□□□□□ -0.75
ATG17YLR423C SAP30P38429 201 aa10.35□□□□□ -0.75
ATG17YLR423C STR2P47164 639 aa10.35□□□□□ -0.75
ATG17YLR423C YDL206WQ12424 762 aa10.35□□□□□ -0.75
ATG17YLR423C ARH1P48360 493 aa10.34□□□□□ -0.75
ATG17YLR423C MCM16Q12262 181 aa10.33□□□□□ -0.76
ATG17YLR423C ELP4Q02884 456 aaKnown RBP10.32□□□□□ -0.76
ATG17YLR423C RAM1P22007 431 aa10.31□□□□□ -0.76
ATG17YLR423C PUP1P25043 261 aa10.31□□□□□ -0.76
ATG17YLR423C TUB4P53378 473 aa10.31□□□□□ -0.76
ATG17YLR423C CDC3P32457 520 aaKnown RBP10.3□□□□□ -0.76
ATG17YLR423C TGL4P36165 910 aa10.3□□□□□ -0.76
ATG17YLR423C NOP8Q08287 484 aaPredicted RBP10.3□□□□□ -0.76
ATG17YLR423C YML083CQ04526 418 aa10.29□□□□□ -0.76
ATG17YLR423C ENV9Q08651 330 aa10.29□□□□□ -0.76
ATG17YLR423C KTR7P40504 517 aa10.28□□□□□ -0.76
ATG17YLR423C BNI4P53858 892 aa10.28□□□□□ -0.76
ATG17YLR423C ISF1P32488 338 aa10.27□□□□□ -0.77
ATG17YLR423C RPA14P50106 137 aa10.27□□□□□ -0.77
ATG17YLR423C ALR1Q08269 859 aa10.27□□□□□ -0.77
ATG17YLR423C SLD2P34252 453 aa10.26□□□□□ -0.77
ATG17YLR423C EMP47P43555 445 aa10.26□□□□□ -0.77
ATG17YLR423C TY1A-DR4O74302 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-HP0C2I4 478 aaKnown RBP10.25□□□□□ -0.77
ATG17YLR423C TY1A-AP0CX57 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-PR1P0CX58 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-ORP0CX59 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-PR2P0CX60 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-DR5P0CX65 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-ER2P0CX66 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-GR3P0CX67 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-LR1P0CX68 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-MR2P0CX69 440 aa10.25□□□□□ -0.77
ATG17YLR423C PTC2P39966 464 aaKnown RBP10.25□□□□□ -0.77
ATG17YLR423C TY1A-JR2P47099 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-DR1Q03856 440 aa10.25□□□□□ -0.77
ATG17YLR423C AGE1Q04412 482 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-ML1Q04706 440 aaKnown RBP10.25□□□□□ -0.77
ATG17YLR423C TY1A-BRQ12217 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-NL2Q12470 440 aa10.25□□□□□ -0.77
ATG17YLR423C TY1A-GR2Q12485 440 aa10.25□□□□□ -0.77
ATG17YLR423C TEC1P18412 486 aa10.24□□□□□ -0.77
ATG17YLR423C PAT1P25644 796 aaKnown RBP10.24□□□□□ -0.77
ATG17YLR423C SPT23P35210 1082 aa10.24□□□□□ -0.77
ATG17YLR423C FKH1P40466 484 aa10.24□□□□□ -0.77
ATG17YLR423C BUD20Q08004 166 aaPredicted RBP10.24□□□□□ -0.77
ATG17YLR423C SEC2P17065 759 aa10.23□□□□□ -0.77
ATG17YLR423C ECM23Q02710 187 aa10.23□□□□□ -0.77
ATG17YLR423C STE20Q03497 939 aaKnown RBP10.23□□□□□ -0.77
ATG17YLR423C ATG3P40344 310 aa10.22□□□□□ -0.77
ATG17YLR423C YDR344CQ05510 147 aa10.22□□□□□ -0.77
ATG17YLR423C GUT2P32191 649 aa10.21□□□□□ -0.77
ATG17YLR423C PEP12P32854 288 aa10.21□□□□□ -0.77
ATG17YLR423C KXD1P53158 218 aa10.21□□□□□ -0.77
ATG17YLR423C YPR097WQ06839 1073 aa10.21□□□□□ -0.77
ATG17YLR423C PRT1P06103 763 aaKnown RBP10.2□□□□□ -0.78
ATG17YLR423C RDS2P19541 446 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms