RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W SLX8P40072 274 aa7.92□□□□□ -1.14
VPS36YLR417W MID1P41821 548 aa7.92□□□□□ -1.14
VPS36YLR417W YNL115CP53925 644 aa7.92□□□□□ -1.14
VPS36YLR417W YNL035CP53962 389 aaKnown RBP7.92□□□□□ -1.14
VPS36YLR417W YML020WQ03722 664 aa7.92□□□□□ -1.14
VPS36YLR417W PML39Q03760 334 aa7.92□□□□□ -1.14
VPS36YLR417W LAM6Q08001 693 aa7.92□□□□□ -1.14
VPS36YLR417W ISU2Q12056 156 aa7.92□□□□□ -1.14
VPS36YLR417W SLY41P22215 453 aa7.92□□□□□ -1.14
VPS36YLR417W CPS1P27614 576 aa7.92□□□□□ -1.14
VPS36YLR417W IOC2Q12072 812 aa7.92□□□□□ -1.14
VPS36YLR417W SPP1Q03012 353 aa7.91□□□□□ -1.14
VPS36YLR417W MAK16P10962 306 aaPredicted RBP7.89□□□□□ -1.15
VPS36YLR417W NOP8Q08287 484 aaPredicted RBP7.89□□□□□ -1.15
VPS36YLR417W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
VPS36YLR417W SIS2P36024 562 aa7.87□□□□□ -1.15
VPS36YLR417W NMA111P53920 997 aa7.87□□□□□ -1.15
VPS36YLR417W YDJ1P25491 409 aaKnown RBP7.86□□□□□ -1.15
VPS36YLR417W ENO2P00925 437 aaKnown RBP7.86□□□□□ -1.15
VPS36YLR417W SEC61P32915 480 aa7.86□□□□□ -1.15
VPS36YLR417W PEX29Q03370 554 aa7.86□□□□□ -1.15
VPS36YLR417W UBP9P39967 754 aa7.85□□□□□ -1.15
VPS36YLR417W PUS6P53294 404 aa7.85□□□□□ -1.15
VPS36YLR417W MRX10Q05648 414 aa7.84□□□□□ -1.15
VPS36YLR417W NOB1Q08444 459 aaKnown RBP7.84□□□□□ -1.15
VPS36YLR417W ENO1P00924 437 aaKnown RBP7.83□□□□□ -1.16
VPS36YLR417W TRM1P15565 570 aaKnown RBP7.83□□□□□ -1.16
VPS36YLR417W RTG1P32607 177 aa7.83□□□□□ -1.16
VPS36YLR417W NAF1P53919 492 aaKnown RBP7.83□□□□□ -1.16
VPS36YLR417W RPL34AP87262 121 aaPredicted RBP7.83□□□□□ -1.16
VPS36YLR417W NUD1P32336 851 aa7.83□□□□□ -1.16
VPS36YLR417W RIM21P48565 533 aa7.83□□□□□ -1.16
VPS36YLR417W YPP1P46951 817 aa7.82□□□□□ -1.16
VPS36YLR417W KEX2P13134 814 aa7.81□□□□□ -1.16
VPS36YLR417W LDB19Q12502 818 aa7.81□□□□□ -1.16
VPS36YLR417W NPL4P33755 580 aa7.8□□□□□ -1.16
VPS36YLR417W TFG1P41895 735 aaPredicted RBP7.8□□□□□ -1.16
VPS36YLR417W PUP1P25043 261 aa7.79□□□□□ -1.16
VPS36YLR417W ERF2Q06551 359 aa7.79□□□□□ -1.16
VPS36YLR417W CDC3P32457 520 aaKnown RBP7.78□□□□□ -1.16
VPS36YLR417W TBF1Q02457 562 aa7.78□□□□□ -1.16
VPS36YLR417W YDL129WQ07555 291 aa7.78□□□□□ -1.16
VPS36YLR417W NCR1Q12200 1170 aa7.77□□□□□ -1.17
VPS36YLR417W PDR1P12383 1068 aa7.75□□□□□ -1.17
VPS36YLR417W TGL4P36165 910 aa7.75□□□□□ -1.17
VPS36YLR417W MCM16Q12262 181 aa7.75□□□□□ -1.17
VPS36YLR417W PEP12P32854 288 aa7.75□□□□□ -1.17
VPS36YLR417W SLD2P34252 453 aa7.75□□□□□ -1.17
VPS36YLR417W HAP5Q02516 242 aa7.75□□□□□ -1.17
VPS36YLR417W YML083CQ04526 418 aa7.75□□□□□ -1.17
VPS36YLR417W STR2P47164 639 aa7.73□□□□□ -1.17
VPS36YLR417W ISM1P48526 1002 aa7.73□□□□□ -1.17
VPS36YLR417W ARH1P48360 493 aa7.72□□□□□ -1.17
VPS36YLR417W YDL206WQ12424 762 aa7.72□□□□□ -1.17
VPS36YLR417W RDS2P19541 446 aaKnown RBP7.71□□□□□ -1.18
VPS36YLR417W GCD11P32481 527 aaKnown RBP7.71□□□□□ -1.18
VPS36YLR417W RPA14P50106 137 aa7.71□□□□□ -1.18
VPS36YLR417W AGE1Q04412 482 aa7.71□□□□□ -1.18
VPS36YLR417W RAM1P22007 431 aa7.7□□□□□ -1.18
VPS36YLR417W TUB4P53378 473 aa7.7□□□□□ -1.18
VPS36YLR417W YPR097WQ06839 1073 aa7.69□□□□□ -1.18
VPS36YLR417W ENV9Q08651 330 aa7.69□□□□□ -1.18
VPS36YLR417W SSF1P38789 453 aaPredicted RBP7.68□□□□□ -1.18
VPS36YLR417W MRX12P47084 519 aa7.68□□□□□ -1.18
VPS36YLR417W TY1A-DR4O74302 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-HP0C2I4 478 aaKnown RBP7.67□□□□□ -1.18
VPS36YLR417W TY1A-AP0CX57 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-PR1P0CX58 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-ORP0CX59 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-PR2P0CX60 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-DR5P0CX65 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-ER2P0CX66 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-GR3P0CX67 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-LR1P0CX68 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-MR2P0CX69 440 aa7.67□□□□□ -1.18
VPS36YLR417W SEC2P17065 759 aa7.67□□□□□ -1.18
VPS36YLR417W EMP47P43555 445 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-JR2P47099 440 aa7.67□□□□□ -1.18
VPS36YLR417W BNI4P53858 892 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-DR1Q03856 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-ML1Q04706 440 aaKnown RBP7.67□□□□□ -1.18
VPS36YLR417W TY1A-BRQ12217 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-NL2Q12470 440 aa7.67□□□□□ -1.18
VPS36YLR417W TY1A-GR2Q12485 440 aa7.67□□□□□ -1.18
VPS36YLR417W BUD20Q08004 166 aaPredicted RBP7.66□□□□□ -1.18
VPS36YLR417W ALR1Q08269 859 aa7.66□□□□□ -1.18
VPS36YLR417W ISF1P32488 338 aa7.66□□□□□ -1.18
VPS36YLR417W ECM23Q02710 187 aa7.66□□□□□ -1.18
VPS36YLR417W FRA1Q07825 749 aa7.66□□□□□ -1.18
VPS36YLR417W GAL2P13181 574 aa7.65□□□□□ -1.18
VPS36YLR417W TEC1P18412 486 aa7.65□□□□□ -1.18
VPS36YLR417W GUT2P32191 649 aa7.65□□□□□ -1.18
VPS36YLR417W ATG3P40344 310 aa7.65□□□□□ -1.18
VPS36YLR417W KTR7P40504 517 aa7.65□□□□□ -1.18
VPS36YLR417W STE20Q03497 939 aaKnown RBP7.65□□□□□ -1.18
VPS36YLR417W HAT1Q12341 374 aa7.65□□□□□ -1.18
VPS36YLR417W SAP30P38429 201 aa7.64□□□□□ -1.19
VPS36YLR417W FIG4P42837 879 aa7.64□□□□□ -1.19
VPS36YLR417W SPT23P35210 1082 aa7.62□□□□□ -1.19
VPS36YLR417W PRT1P06103 763 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms