RNA–Protein interactions for RNA: YLR245C

CDD1, Transcript of Cytidine deaminase, yeast

Gene CDD1, Length 429 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDD1	YLR245C	FKS3	Q04952	1785 aa		11.82	□□□□□ -0.52
CDD1	YLR245C	ESL2	P36168	1195 aa		11.81	□□□□□ -0.52
CDD1	YLR245C	KIP3	P53086	805 aa	Known RBP	11.8	□□□□□ -0.52
CDD1	YLR245C	MLP1	Q02455	1875 aa	Known RBP	11.79	□□□□□ -0.52
CDD1	YLR245C	URB1	P34241	1764 aa	Known RBP	11.78	□□□□□ -0.52
CDD1	YLR245C	YAH1	Q12184	172 aa	Known RBP	11.77	□□□□□ -0.53
CDD1	YLR245C	CPS1	P27614	576 aa		11.76	□□□□□ -0.53
CDD1	YLR245C	ENT1	Q12518	454 aa		11.76	□□□□□ -0.53
CDD1	YLR245C	SPE2	P21182	396 aa		11.75	□□□□□ -0.53
CDD1	YLR245C	YLR419W	Q06698	1435 aa	Known RBP	11.74	□□□□□ -0.53
CDD1	YLR245C	YRF1-3	P0CX14	1859 aa		11.73	□□□□□ -0.53
CDD1	YLR245C	YRF1-7	P0CX15	1859 aa		11.73	□□□□□ -0.53
CDD1	YLR245C	YRF1-6	P53819	1859 aa		11.73	□□□□□ -0.53
CDD1	YLR245C	ENV9	Q08651	330 aa		11.71	□□□□□ -0.53
CDD1	YLR245C	PRP45	P28004	379 aa	Predicted RBP	11.69	□□□□□ -0.54
CDD1	YLR245C	GLN1	P32288	370 aa	Known RBP	11.69	□□□□□ -0.54
CDD1	YLR245C	YIL055C	P40523	627 aa	Known RBP	11.69	□□□□□ -0.54
CDD1	YLR245C	NAP1	P25293	417 aa	Known RBP	11.68	□□□□□ -0.54
CDD1	YLR245C	YML133C	Q03099	1374 aa		11.66	□□□□□ -0.54
CDD1	YLR245C	YLL067C	Q07888	1374 aa		11.66	□□□□□ -0.54
CDD1	YLR245C	YLL066C	Q99208	1374 aa		11.66	□□□□□ -0.54
CDD1	YLR245C	PSK1	P31374	1356 aa		11.65	□□□□□ -0.55
CDD1	YLR245C	CHZ1	P40019	153 aa	Predicted RBP	11.63	□□□□□ -0.55
CDD1	YLR245C	ADE6	P38972	1358 aa	Known RBP	11.63	□□□□□ -0.55
CDD1	YLR245C	MSB3	P48566	633 aa	Predicted RBP	11.62	□□□□□ -0.55
CDD1	YLR245C	APC1	P53886	1748 aa		11.62	□□□□□ -0.55
CDD1	YLR245C	IMH1	Q06704	911 aa	Known RBP	11.61	□□□□□ -0.55
CDD1	YLR245C	RPS24A	P0CX31	135 aa	Known RBP	11.6	□□□□□ -0.55
CDD1	YLR245C	RPS24B	P0CX32	135 aa	Known RBP	11.6	□□□□□ -0.55
CDD1	YLR245C	PRP5	P21372	849 aa	Predicted RBP	11.59	□□□□□ -0.55
CDD1	YLR245C	CSE4	P36012	229 aa		11.59	□□□□□ -0.55
CDD1	YLR245C	RIM15	P43565	1770 aa		11.54	□□□□□ -0.56
CDD1	YLR245C	RTG3	P38165	486 aa		11.52	□□□□□ -0.57
CDD1	YLR245C	LEU2	P04173	364 aa	Predicted RBP	11.5	□□□□□ -0.57
CDD1	YLR245C	YMR074C	Q04773	145 aa		11.5	□□□□□ -0.57
CDD1	YLR245C	GAS4	Q08271	471 aa		11.48	□□□□□ -0.57
CDD1	YLR245C	NST1	P53935	1240 aa		11.47	□□□□□ -0.57
CDD1	YLR245C	IES2	P40154	320 aa		11.46	□□□□□ -0.57
CDD1	YLR245C	SLM3	Q12093	417 aa		11.46	□□□□□ -0.57
CDD1	YLR245C	SNF2	P22082	1703 aa		11.46	□□□□□ -0.58
CDD1	YLR245C	LEU3	P08638	886 aa		11.45	□□□□□ -0.58
CDD1	YLR245C	BUD31	P25337	157 aa	Predicted RBP	11.45	□□□□□ -0.58
CDD1	YLR245C	MTR4	P47047	1073 aa	Known RBP	11.45	□□□□□ -0.58
CDD1	YLR245C	DOT5	P40553	215 aa		11.44	□□□□□ -0.58
CDD1	YLR245C	TCB1	Q12466	1186 aa		11.44	□□□□□ -0.58
CDD1	YLR245C	RSF2	P46974	1380 aa		11.43	□□□□□ -0.58
CDD1	YLR245C	FKH1	P40466	484 aa		11.43	□□□□□ -0.58
CDD1	YLR245C	PRP43	P53131	767 aa	Known RBP	11.43	□□□□□ -0.58
CDD1	YLR245C	AUS1	Q08409	1394 aa		11.42	□□□□□ -0.58
CDD1	YLR245C	DPS1	P04802	557 aa	Known RBP	11.42	□□□□□ -0.58
CDD1	YLR245C	XKS1	P42826	600 aa		11.42	□□□□□ -0.58
CDD1	YLR245C	RPN11	P43588	306 aa	Known RBP	11.42	□□□□□ -0.58
CDD1	YLR245C	FOX2	Q02207	900 aa	Known RBP	11.42	□□□□□ -0.58
CDD1	YLR245C	HIM1	Q06674	414 aa		11.41	□□□□□ -0.58
CDD1	YLR245C	POL5	P39985	1022 aa	Known RBP	11.39	□□□□□ -0.59
CDD1	YLR245C	YRF1-4	O13559	1382 aa		11.38	□□□□□ -0.59
CDD1	YLR245C	PDS5	Q04264	1277 aa		11.37	□□□□□ -0.59
CDD1	YLR245C	MHP1	P43638	1398 aa		11.37	□□□□□ -0.59
CDD1	YLR245C	COB	P00163	385 aa		11.33	□□□□□ -0.6
CDD1	YLR245C	YKL133C	P36066	463 aa		11.33	□□□□□ -0.6
CDD1	YLR245C	NPR2	P39923	615 aa		11.33	□□□□□ -0.6
CDD1	YLR245C	YEF3	P16521	1044 aa	Known RBP	11.32	□□□□□ -0.6
CDD1	YLR245C	LYS4	P49367	693 aa	Predicted RBP	11.32	□□□□□ -0.6
CDD1	YLR245C	FRK1	Q03002	865 aa	Predicted RBP	11.32	□□□□□ -0.6
CDD1	YLR245C	PRI1	P10363	409 aa		11.31	□□□□□ -0.6
CDD1	YLR245C	TRK1	P12685	1235 aa		11.31	□□□□□ -0.6
CDD1	YLR245C	PDI1	P17967	522 aa	Known RBP	11.31	□□□□□ -0.6
CDD1	YLR245C	ROM2	P51862	1356 aa	Known RBP	11.3	□□□□□ -0.6
CDD1	YLR245C	RCR1	P38212	213 aa		11.3	□□□□□ -0.6
CDD1	YLR245C	ENP1	P38333	483 aa	Known RBP	11.3	□□□□□ -0.6
CDD1	YLR245C	YKR075C	P36155	307 aa		11.28	□□□□□ -0.6
CDD1	YLR245C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.28	□□□□□ -0.6	not detected
CDD1	YLR245C	ADE16	P54113	591 aa	Known RBP	11.28	□□□□□ -0.6
CDD1	YLR245C	PSD2	P53037	1138 aa	Known RBP	11.27	□□□□□ -0.61
CDD1	YLR245C	RTF1	P53064	558 aa		11.27	□□□□□ -0.61
CDD1	YLR245C	YBL086C	P38177	466 aa		11.24	□□□□□ -0.61
CDD1	YLR245C	SEC3	P33332	1336 aa	Known RBP	11.23	□□□□□ -0.61
CDD1	YLR245C	SIR4	P11978	1358 aa		11.22	□□□□□ -0.61
CDD1	YLR245C	KAR2	P16474	682 aa	Known RBP	11.22	□□□□□ -0.61
CDD1	YLR245C	UBP1	P25037	809 aa		11.22	□□□□□ -0.61
CDD1	YLR245C	RPO41	P13433	1351 aa	Known RBP	11.21	□□□□□ -0.61
CDD1	YLR245C	CTH1	P47976	325 aa		11.21	□□□□□ -0.61
CDD1	YLR245C	TAP42	Q04372	366 aa		11.21	□□□□□ -0.61
CDD1	YLR245C	YJL181W	P46987	611 aa		11.2	□□□□□ -0.62
CDD1	YLR245C	PAP2	P53632	584 aa	Known RBP	11.19	□□□□□ -0.62
CDD1	YLR245C	LAM6	Q08001	693 aa		11.18	□□□□□ -0.62
CDD1	YLR245C	PRP40	P33203	583 aa	Known RBP	11.17	□□□□□ -0.62
CDD1	YLR245C	INP54	Q08227	384 aa	Known RBP	11.17	□□□□□ -0.62
CDD1	YLR245C	UTP10	P42945	1769 aa	Known RBP	11.17	□□□□□ -0.62
CDD1	YLR245C	GRX4	P32642	244 aa		11.16	□□□□□ -0.62
CDD1	YLR245C	RRP46	P53256	223 aa	Predicted RBP	11.15	□□□□□ -0.62
CDD1	YLR245C	SPT7	P35177	1332 aa		11.14	□□□□□ -0.63
CDD1	YLR245C	HSP104	P31539	908 aa	Known RBP	11.14	□□□□□ -0.63
CDD1	YLR245C	SSA2	P10592	639 aa	Known RBP	11.12	□□□□□ -0.63
CDD1	YLR245C	OSM1	P21375	501 aa	Known RBP	11.12	□□□□□ -0.63
CDD1	YLR245C	DSD1	P53095	428 aa		11.12	□□□□□ -0.63
CDD1	YLR245C	ATG13	Q06628	738 aa		11.12	□□□□□ -0.63
CDD1	YLR245C	NUP145	P49687	1317 aa		11.11	□□□□□ -0.63
CDD1	YLR245C	SCT1	P32784	759 aa		11.11	□□□□□ -0.63
CDD1	YLR245C	MEC3	Q02574	474 aa		11.11	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms