RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	NUD1	P32336	851 aa		5.59	□□□□□ -1.51
PAM18	YLR008C	YMR196W	Q04336	1088 aa		5.58	□□□□□ -1.52
PAM18	YLR008C	RAM1	P22007	431 aa		5.56	□□□□□ -1.52
PAM18	YLR008C	NIS1	P53939	407 aa		5.56	□□□□□ -1.52
PAM18	YLR008C	YML082W	Q04533	649 aa	Known RBP	5.56	□□□□□ -1.52
PAM18	YLR008C	KEX2	P13134	814 aa		5.54	□□□□□ -1.52
PAM18	YLR008C	STR2	P47164	639 aa		5.54	□□□□□ -1.52
PAM18	YLR008C	ISM1	P48526	1002 aa		5.54	□□□□□ -1.52
PAM18	YLR008C	FPK1	P53739	893 aa		5.54	□□□□□ -1.52
PAM18	YLR008C	SRC1	Q03707	834 aa		5.54	□□□□□ -1.52
PAM18	YLR008C	YML020W	Q03722	664 aa		5.54	□□□□□ -1.52
PAM18	YLR008C	YPR015C	Q12531	247 aa		5.54	□□□□□ -1.52
PAM18	YLR008C	TOP1	P04786	769 aa		5.53	□□□□□ -1.52
PAM18	YLR008C	GCD11	P32481	527 aa	Known RBP	5.53	□□□□□ -1.52
PAM18	YLR008C	GYP1	Q08484	637 aa		5.52	□□□□□ -1.53
PAM18	YLR008C	CSN12	P47130	423 aa		5.51	□□□□□ -1.53
PAM18	YLR008C	SNU71	P53207	620 aa	Known RBP	5.51	□□□□□ -1.53
PAM18	YLR008C	BUD20	Q08004	166 aa	Predicted RBP	5.51	□□□□□ -1.53
PAM18	YLR008C	TYW1	Q08960	810 aa	Known RBP	5.51	□□□□□ -1.53
PAM18	YLR008C	SGS1	P35187	1447 aa		5.5	□□□□□ -1.53
PAM18	YLR008C	SCJ1	P25303	377 aa		5.5	□□□□□ -1.53
PAM18	YLR008C	GLN1	P32288	370 aa	Known RBP	5.5	□□□□□ -1.53
PAM18	YLR008C	ERF2	Q06551	359 aa		5.5	□□□□□ -1.53
PAM18	YLR008C	MMP1	Q12372	583 aa		5.5	□□□□□ -1.53
PAM18	YLR008C	SPA2	P23201	1466 aa	Known RBP	5.5	□□□□□ -1.53
PAM18	YLR008C	PRT1	P06103	763 aa	Known RBP	5.49	□□□□□ -1.53
PAM18	YLR008C	SIT4	P20604	311 aa		5.49	□□□□□ -1.53
PAM18	YLR008C	SLY41	P22215	453 aa		5.49	□□□□□ -1.53
PAM18	YLR008C	GUA1	P38625	525 aa	Known RBP	5.49	□□□□□ -1.53
PAM18	YLR008C	HST2	P53686	357 aa		5.49	□□□□□ -1.53
PAM18	YLR008C	YNL115C	P53925	644 aa		5.49	□□□□□ -1.53
PAM18	YLR008C	ESS1	P22696	170 aa		5.48	□□□□□ -1.53
PAM18	YLR008C	NOP8	Q08287	484 aa	Predicted RBP	5.48	□□□□□ -1.53
PAM18	YLR008C	INO80	P53115	1489 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-DR4	O74302	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-H	P0C2I4	478 aa	Known RBP	5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-A	P0CX57	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-PR1	P0CX58	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-OR	P0CX59	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-PR2	P0CX60	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-DR5	P0CX65	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-ER2	P0CX66	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-GR3	P0CX67	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-LR1	P0CX68	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-MR2	P0CX69	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	SSA2	P10592	639 aa	Known RBP	5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-JR2	P47099	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	RTF1	P53064	558 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-DR1	Q03856	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-ML1	Q04706	440 aa	Known RBP	5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-BR	Q12217	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-NL2	Q12470	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	TY1A-GR2	Q12485	440 aa		5.47	□□□□□ -1.53
PAM18	YLR008C	SEC2	P17065	759 aa		5.46	□□□□□ -1.54
PAM18	YLR008C	RGA1	P39083	1007 aa		5.46	□□□□□ -1.54
PAM18	YLR008C	PKH3	Q03306	898 aa	Predicted RBP	5.46	□□□□□ -1.54
PAM18	YLR008C	KTR1	P27810	393 aa	Known RBP	5.45	□□□□□ -1.54
PAM18	YLR008C	SPT16	P32558	1035 aa	Known RBP	5.45	□□□□□ -1.54
PAM18	YLR008C	RRN7	P40992	514 aa		5.45	□□□□□ -1.54
PAM18	YLR008C	PAT1	P25644	796 aa	Known RBP	5.44	□□□□□ -1.54
PAM18	YLR008C	SAS4	Q04003	481 aa		5.44	□□□□□ -1.54
PAM18	YLR008C	YJU3	P28321	313 aa		5.43	□□□□□ -1.54
PAM18	YLR008C	BRL1	P38770	471 aa		5.43	□□□□□ -1.54
PAM18	YLR008C	TUB4	P53378	473 aa		5.43	□□□□□ -1.54
PAM18	YLR008C	TBF1	Q02457	562 aa		5.43	□□□□□ -1.54
PAM18	YLR008C	ARG8	P18544	423 aa		5.41	□□□□□ -1.54
PAM18	YLR008C	HPC2	Q01448	625 aa		5.41	□□□□□ -1.54
PAM18	YLR008C	TFB3	Q03290	321 aa		5.41	□□□□□ -1.54
PAM18	YLR008C	TRM1	P15565	570 aa	Known RBP	5.4	□□□□□ -1.54
PAM18	YLR008C	MRF1	P30775	413 aa	Predicted RBP	5.4	□□□□□ -1.54
PAM18	YLR008C	PAC1	P39946	494 aa	Known RBP	5.4	□□□□□ -1.54
PAM18	YLR008C	HGH1	P48362	394 aa	Known RBP	5.4	□□□□□ -1.54
PAM18	YLR008C	PUS6	P53294	404 aa		5.4	□□□□□ -1.54
PAM18	YLR008C	ERG12	P07277	443 aa		5.39	□□□□□ -1.55
PAM18	YLR008C	SLX8	P40072	274 aa		5.39	□□□□□ -1.55
PAM18	YLR008C	NOP7	P53261	605 aa	Known RBP	5.39	□□□□□ -1.55
PAM18	YLR008C	AGE1	Q04412	482 aa		5.39	□□□□□ -1.55
PAM18	YLR008C	RAD59	Q12223	238 aa		5.39	□□□□□ -1.55
PAM18	YLR008C	RAS1	P01119	309 aa		5.38	□□□□□ -1.55
PAM18	YLR008C	LAM6	Q08001	693 aa		5.38	□□□□□ -1.55
PAM18	YLR008C	YDL206W	Q12424	762 aa		5.38	□□□□□ -1.55
PAM18	YLR008C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.36	□□□□□ -1.55	not detected
PAM18	YLR008C	KXD1	P53158	218 aa		5.36	□□□□□ -1.55
PAM18	YLR008C	SSN2	P38931	1420 aa		5.35	□□□□□ -1.55
PAM18	YLR008C	SDH2	P21801	266 aa		5.35	□□□□□ -1.55
PAM18	YLR008C	PKC1	P24583	1151 aa		5.35	□□□□□ -1.55
PAM18	YLR008C	YEL077C	Q3E7X8	1277 aa		5.35	□□□□□ -1.55
PAM18	YLR008C	SWE1	P32944	819 aa		5.34	□□□□□ -1.55
PAM18	YLR008C	YBL036C	P38197	257 aa		5.34	□□□□□ -1.55
PAM18	YLR008C	FRK1	Q03002	865 aa	Predicted RBP	5.34	□□□□□ -1.55
PAM18	YLR008C	ALR1	Q08269	859 aa		5.34	□□□□□ -1.55
PAM18	YLR008C	RSC30	P38781	883 aa		5.33	□□□□□ -1.56
PAM18	YLR008C	ATG36	P46983	293 aa		5.33	□□□□□ -1.56
PAM18	YLR008C	RPA14	P50106	137 aa		5.33	□□□□□ -1.56
PAM18	YLR008C	PDC1	P06169	563 aa	Known RBP	5.32	□□□□□ -1.56
PAM18	YLR008C	GEF1	P37020	779 aa		5.32	□□□□□ -1.56
PAM18	YLR008C	NUG1	P40010	520 aa	Known RBP	5.32	□□□□□ -1.56
PAM18	YLR008C	AMS1	P22855	1083 aa		5.31	□□□□□ -1.56
PAM18	YLR008C	CST6	P40535	587 aa		5.31	□□□□□ -1.56
PAM18	YLR008C	HXT10	P43581	546 aa		5.31	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms