RNA–Protein interactions for RNA: YLL013C

PUF3, Transcript of Protein of the mitochondrial outer surface, yeastyeast

Gene PUF3, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF3YLL013C CPS1P27614 576 aa7.99□□□□□ -1.13
PUF3YLL013C ENV9Q08651 330 aa7.98□□□□□ -1.13
PUF3YLL013C TY4B-HP0C2J7 1802 aa7.96□□□□□ -1.13
PUF3YLL013C TY4B-JP47024 1803 aa7.96□□□□□ -1.13
PUF3YLL013C PRP45P28004 379 aaPredicted RBP7.96□□□□□ -1.14
PUF3YLL013C IMH1Q06704 911 aaKnown RBP7.95□□□□□ -1.14
PUF3YLL013C PPH3P32345 308 aa7.94□□□□□ -1.14
PUF3YLL013C YMR074CQ04773 145 aa7.93□□□□□ -1.14
PUF3YLL013C KIP3P53086 805 aaKnown RBP7.92□□□□□ -1.14
PUF3YLL013C SPE2P21182 396 aa7.92□□□□□ -1.14
PUF3YLL013C PRP5P21372 849 aaPredicted RBP7.9□□□□□ -1.15
PUF3YLL013C PSK1P31374 1356 aa7.89□□□□□ -1.15
PUF3YLL013C PRI1P10363 409 aa7.89□□□□□ -1.15
PUF3YLL013C ADE6P38972 1358 aaKnown RBP7.88□□□□□ -1.15
PUF3YLL013C LEU3P08638 886 aa7.87□□□□□ -1.15
PUF3YLL013C ORC1P54784 914 aaPredicted RBP7.87□□□□□ -1.15
PUF3YLL013C CHZ1P40019 153 aaPredicted RBP7.85□□□□□ -1.15
PUF3YLL013C MSB3P48566 633 aaPredicted RBP7.85□□□□□ -1.15
PUF3YLL013C URB1P34241 1764 aaKnown RBP7.84□□□□□ -1.15
PUF3YLL013C BUD31P25337 157 aaPredicted RBP7.84□□□□□ -1.15
PUF3YLL013C YLR419WQ06698 1435 aaKnown RBP7.84□□□□□ -1.16
PUF3YLL013C LEU2P04173 364 aaPredicted RBP7.83□□□□□ -1.16
PUF3YLL013C CSE4P36012 229 aa7.83□□□□□ -1.16
PUF3YLL013C MTR4P47047 1073 aaKnown RBP7.82□□□□□ -1.16
PUF3YLL013C SCT1P32784 759 aa7.82□□□□□ -1.16
PUF3YLL013C TCB1Q12466 1186 aa7.82□□□□□ -1.16
PUF3YLL013C FKS3Q04952 1785 aa7.81□□□□□ -1.16
PUF3YLL013C RPS24AP0CX31 135 aaKnown RBP7.81□□□□□ -1.16
PUF3YLL013C RPS24BP0CX32 135 aaKnown RBP7.81□□□□□ -1.16
PUF3YLL013C IES2P40154 320 aa7.81□□□□□ -1.16
PUF3YLL013C UBP1P25037 809 aa7.8□□□□□ -1.16
PUF3YLL013C SLM3Q12093 417 aa7.79□□□□□ -1.16
PUF3YLL013C RSF2P46974 1380 aa7.79□□□□□ -1.16
PUF3YLL013C PRP43P53131 767 aaKnown RBP7.79□□□□□ -1.16
PUF3YLL013C RPN11P43588 306 aaKnown RBP7.78□□□□□ -1.16
PUF3YLL013C ENP1P38333 483 aaKnown RBP7.77□□□□□ -1.17
PUF3YLL013C DOT5P40553 215 aa7.77□□□□□ -1.17
PUF3YLL013C ROM2P51862 1356 aaKnown RBP7.77□□□□□ -1.17
PUF3YLL013C MLP1Q02455 1875 aaKnown RBP7.77□□□□□ -1.17
PUF3YLL013C YIL177CP40434 1758 aa7.77□□□□□ -1.17
PUF3YLL013C YJL225CP40889 1758 aa7.77□□□□□ -1.17
PUF3YLL013C YRF1-3P0CX14 1859 aa7.77□□□□□ -1.17
PUF3YLL013C YRF1-7P0CX15 1859 aa7.77□□□□□ -1.17
PUF3YLL013C YRF1-6P53819 1859 aa7.77□□□□□ -1.17
PUF3YLL013C YJL181WP46987 611 aa7.75□□□□□ -1.17
PUF3YLL013C YML133CQ03099 1374 aa7.74□□□□□ -1.17
PUF3YLL013C YLL067CQ07888 1374 aa7.74□□□□□ -1.17
PUF3YLL013C YLL066CQ99208 1374 aa7.74□□□□□ -1.17
PUF3YLL013C XKS1P42826 600 aa7.74□□□□□ -1.17
PUF3YLL013C FOX2Q02207 900 aaKnown RBP7.74□□□□□ -1.17
PUF3YLL013C APC1P53886 1748 aa7.73□□□□□ -1.17
PUF3YLL013C EDE1P34216 1381 aa7.73□□□□□ -1.17
PUF3YLL013C YKL133CP36066 463 aa7.72□□□□□ -1.17
PUF3YLL013C YEF3P16521 1044 aaKnown RBP7.72□□□□□ -1.17
PUF3YLL013C LAM6Q08001 693 aa7.72□□□□□ -1.17
PUF3YLL013C DPS1P04802 557 aaKnown RBP7.71□□□□□ -1.17
PUF3YLL013C RTF1P53064 558 aa7.71□□□□□ -1.18
PUF3YLL013C PRP40P33203 583 aaKnown RBP7.7□□□□□ -1.18
PUF3YLL013C YBL086CP38177 466 aa7.7□□□□□ -1.18
PUF3YLL013C GAS4Q08271 471 aa7.7□□□□□ -1.18
PUF3YLL013C PDI1P17967 522 aaKnown RBP7.7□□□□□ -1.18
PUF3YLL013C FKH1P40466 484 aa7.7□□□□□ -1.18
PUF3YLL013C COBP00163 385 aa7.68□□□□□ -1.18
PUF3YLL013C NPR2P39923 615 aa7.68□□□□□ -1.18
PUF3YLL013C YRF1-4O13559 1382 aa7.68□□□□□ -1.18
PUF3YLL013C UGA2P38067 497 aa7.68□□□□□ -1.18
PUF3YLL013C RTG3P38165 486 aa7.68□□□□□ -1.18
PUF3YLL013C LYS4P49367 693 aaPredicted RBP7.67□□□□□ -1.18
PUF3YLL013C GTT3P39996 337 aa7.66□□□□□ -1.18
PUF3YLL013C ALD2P47771 506 aa7.66□□□□□ -1.18
PUF3YLL013C SNF2P22082 1703 aa7.66□□□□□ -1.18
PUF3YLL013C MEC3Q02574 474 aa7.65□□□□□ -1.18
PUF3YLL013C YKR075CP36155 307 aa7.65□□□□□ -1.19
PUF3YLL013C FRK1Q03002 865 aaPredicted RBP7.64□□□□□ -1.19
PUF3YLL013C SSA2P10592 639 aaKnown RBP7.64□□□□□ -1.19
PUF3YLL013C GRX4P32642 244 aa7.64□□□□□ -1.19
PUF3YLL013C RCR1P38212 213 aa7.64□□□□□ -1.19
PUF3YLL013C POL5P39985 1022 aaKnown RBP7.63□□□□□ -1.19
PUF3YLL013C SIR4P11978 1358 aa7.63□□□□□ -1.19
PUF3YLL013C TAP42Q04372 366 aa7.63□□□□□ -1.19
PUF3YLL013C MHP1P43638 1398 aa7.63□□□□□ -1.19
PUF3YLL013C SEC3P33332 1336 aaKnown RBP7.62□□□□□ -1.19
PUF3YLL013C AUS1Q08409 1394 aa7.62□□□□□ -1.19
PUF3YLL013C PDS5Q04264 1277 aa7.62□□□□□ -1.19
PUF3YLL013C ADE16P54113 591 aaKnown RBP7.61□□□□□ -1.19
PUF3YLL013C RIM15P43565 1770 aa7.61□□□□□ -1.19
PUF3YLL013C HIM1Q06674 414 aa7.61□□□□□ -1.19
PUF3YLL013C CTH1P47976 325 aa7.6□□□□□ -1.19
PUF3YLL013C ATG13Q06628 738 aa7.6□□□□□ -1.19
PUF3YLL013C KAR2P16474 682 aaKnown RBP7.59□□□□□ -1.19
PUF3YLL013C SPT7P35177 1332 aa7.57□□□□□ -1.2
PUF3YLL013C RPO41P13433 1351 aaKnown RBP7.57□□□□□ -1.2
PUF3YLL013C MSB4Q12317 492 aa7.56□□□□□ -1.2
PUF3YLL013C BDF1P35817 686 aa7.56□□□□□ -1.2
PUF3YLL013C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
PUF3YLL013C ALD3P54114 506 aa7.54□□□□□ -1.2
PUF3YLL013C PAP2P53632 584 aaKnown RBP7.54□□□□□ -1.2
PUF3YLL013C INP54Q08227 384 aaKnown RBP7.54□□□□□ -1.2
PUF3YLL013C RPG1P38249 964 aaKnown RBP7.53□□□□□ -1.2
PUF3YLL013C OSM1P21375 501 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms