RNA–Protein interactions for RNA: YIL170W

HXT12, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene HXT12, Length 1,374 nt, Biotype pseudogene, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HXT12YIL170W TY4B-HP0C2J7 1802 aa12.51□□□□□ -0.41
HXT12YIL170W TY4B-JP47024 1803 aa12.51□□□□□ -0.41
HXT12YIL170W ENT1Q12518 454 aa12.51□□□□□ -0.41
HXT12YIL170W RRP5Q05022 1729 aaKnown RBP12.49□□□□□ -0.41
HXT12YIL170W YLR419WQ06698 1435 aaKnown RBP12.49□□□□□ -0.41
HXT12YIL170W PRP45P28004 379 aaPredicted RBP12.48□□□□□ -0.41
HXT12YIL170W CHZ1P40019 153 aaPredicted RBP12.48□□□□□ -0.41
HXT12YIL170W YIL055CP40523 627 aaKnown RBP12.45□□□□□ -0.42
HXT12YIL170W ENV9Q08651 330 aa12.45□□□□□ -0.42
HXT12YIL170W PSK1P31374 1356 aa12.45□□□□□ -0.42
HXT12YIL170W YRF1-2P40105 1681 aa12.42□□□□□ -0.42
HXT12YIL170W PRP5P21372 849 aaPredicted RBP12.4□□□□□ -0.42
HXT12YIL170W GLN1P32288 370 aaKnown RBP12.39□□□□□ -0.43
HXT12YIL170W CSE4P36012 229 aa12.39□□□□□ -0.43
HXT12YIL170W IMH1Q06704 911 aaKnown RBP12.38□□□□□ -0.43
HXT12YIL170W ADE6P38972 1358 aaKnown RBP12.37□□□□□ -0.43
HXT12YIL170W LEU2P04173 364 aaPredicted RBP12.37□□□□□ -0.43
HXT12YIL170W SCT1P32784 759 aa12.37□□□□□ -0.43
HXT12YIL170W RPS24AP0CX31 135 aaKnown RBP12.36□□□□□ -0.43
HXT12YIL170W RPS24BP0CX32 135 aaKnown RBP12.36□□□□□ -0.43
HXT12YIL170W POL5P39985 1022 aaKnown RBP12.35□□□□□ -0.43
HXT12YIL170W MTR4P47047 1073 aaKnown RBP12.34□□□□□ -0.43
HXT12YIL170W MLP1Q02455 1875 aaKnown RBP12.34□□□□□ -0.43
HXT12YIL170W MSB3P48566 633 aaPredicted RBP12.33□□□□□ -0.44
HXT12YIL170W LEU3P08638 886 aa12.3□□□□□ -0.44
HXT12YIL170W YML133CQ03099 1374 aa12.3□□□□□ -0.44
HXT12YIL170W YLL067CQ07888 1374 aa12.3□□□□□ -0.44
HXT12YIL170W YLL066CQ99208 1374 aa12.3□□□□□ -0.44
HXT12YIL170W RTG3P38165 486 aa12.28□□□□□ -0.44
HXT12YIL170W YMR074CQ04773 145 aa12.27□□□□□ -0.45
HXT12YIL170W TCB1Q12466 1186 aa12.27□□□□□ -0.45
HXT12YIL170W PRP43P53131 767 aaKnown RBP12.26□□□□□ -0.45
HXT12YIL170W FKH1P40466 484 aa12.25□□□□□ -0.45
HXT12YIL170W URB1P34241 1764 aaKnown RBP12.25□□□□□ -0.45
HXT12YIL170W YIL177CP40434 1758 aa12.25□□□□□ -0.45
HXT12YIL170W YJL225CP40889 1758 aa12.25□□□□□ -0.45
HXT12YIL170W SLM3Q12093 417 aa12.24□□□□□ -0.45
HXT12YIL170W MHP1P43638 1398 aa12.24□□□□□ -0.45
HXT12YIL170W IES2P40154 320 aa12.23□□□□□ -0.45
HXT12YIL170W GAS4Q08271 471 aa12.23□□□□□ -0.45
HXT12YIL170W DPS1P04802 557 aaKnown RBP12.22□□□□□ -0.45
HXT12YIL170W PDS5Q04264 1277 aa12.22□□□□□ -0.45
HXT12YIL170W ENP1P38333 483 aaKnown RBP12.21□□□□□ -0.45
HXT12YIL170W FKS3Q04952 1785 aa12.21□□□□□ -0.45
HXT12YIL170W RTF1P53064 558 aa12.2□□□□□ -0.46
HXT12YIL170W PDI1P17967 522 aaKnown RBP12.19□□□□□ -0.46
HXT12YIL170W RSF2P46974 1380 aa12.19□□□□□ -0.46
HXT12YIL170W XKS1P42826 600 aa12.18□□□□□ -0.46
HXT12YIL170W YRF1-3P0CX14 1859 aa12.16□□□□□ -0.46
HXT12YIL170W YRF1-7P0CX15 1859 aa12.16□□□□□ -0.46
HXT12YIL170W YRF1-6P53819 1859 aa12.16□□□□□ -0.46
HXT12YIL170W BUD31P25337 157 aaPredicted RBP12.16□□□□□ -0.46
HXT12YIL170W DOT5P40553 215 aa12.15□□□□□ -0.46
HXT12YIL170W APC1P53886 1748 aa12.14□□□□□ -0.47
HXT12YIL170W PRI1P10363 409 aa12.14□□□□□ -0.47
HXT12YIL170W RPN11P43588 306 aaKnown RBP12.13□□□□□ -0.47
HXT12YIL170W HIM1Q06674 414 aa12.13□□□□□ -0.47
HXT12YIL170W YKL133CP36066 463 aa12.12□□□□□ -0.47
HXT12YIL170W ROM2P51862 1356 aaKnown RBP12.12□□□□□ -0.47
HXT12YIL170W UBP1P25037 809 aa12.1□□□□□ -0.47
HXT12YIL170W FOX2Q02207 900 aaKnown RBP12.1□□□□□ -0.47
HXT12YIL170W AUS1Q08409 1394 aa12.1□□□□□ -0.47
HXT12YIL170W KAR2P16474 682 aaKnown RBP12.09□□□□□ -0.47
HXT12YIL170W GRX4P32642 244 aa12.08□□□□□ -0.48
HXT12YIL170W YJL181WP46987 611 aa12.08□□□□□ -0.48
HXT12YIL170W TAP42Q04372 366 aa12.08□□□□□ -0.48
HXT12YIL170W NST1P53935 1240 aa12.07□□□□□ -0.48
HXT12YIL170W YRF1-4O13559 1382 aa12.06□□□□□ -0.48
HXT12YIL170W SEC3P33332 1336 aaKnown RBP12.05□□□□□ -0.48
HXT12YIL170W COBP00163 385 aa12.05□□□□□ -0.48
HXT12YIL170W RCR1P38212 213 aa12.05□□□□□ -0.48
HXT12YIL170W PAP2P53632 584 aaKnown RBP12.05□□□□□ -0.48
HXT12YIL170W LAM6Q08001 693 aa12.05□□□□□ -0.48
HXT12YIL170W FRK1Q03002 865 aaPredicted RBP12.04□□□□□ -0.48
HXT12YIL170W YEF3P16521 1044 aaKnown RBP12.03□□□□□ -0.48
HXT12YIL170W PRP40P33203 583 aaKnown RBP12.03□□□□□ -0.48
HXT12YIL170W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.03□□□□□ -0.48not detected
HXT12YIL170W PSD2P53037 1138 aaKnown RBP12.03□□□□□ -0.48
HXT12YIL170W MEC3Q02574 474 aa12.01□□□□□ -0.49
HXT12YIL170W SNF2P22082 1703 aa12□□□□□ -0.49
HXT12YIL170W TRK1P12685 1235 aa12□□□□□ -0.49
HXT12YIL170W SIR4P11978 1358 aa11.99□□□□□ -0.49
HXT12YIL170W NPR2P39923 615 aa11.99□□□□□ -0.49
HXT12YIL170W ADE16P54113 591 aaKnown RBP11.99□□□□□ -0.49
HXT12YIL170W LYS4P49367 693 aaPredicted RBP11.98□□□□□ -0.49
HXT12YIL170W YKR075CP36155 307 aa11.97□□□□□ -0.49
HXT12YIL170W RPO41P13433 1351 aaKnown RBP11.97□□□□□ -0.49
HXT12YIL170W ATG13Q06628 738 aa11.96□□□□□ -0.49
HXT12YIL170W YBL086CP38177 466 aa11.94□□□□□ -0.5
HXT12YIL170W EDE1P34216 1381 aa11.94□□□□□ -0.5
HXT12YIL170W RIM15P43565 1770 aa11.94□□□□□ -0.5
HXT12YIL170W HSP104P31539 908 aaKnown RBP11.93□□□□□ -0.5
HXT12YIL170W SPT7P35177 1332 aa11.92□□□□□ -0.5
HXT12YIL170W DSD1P53095 428 aa11.92□□□□□ -0.5
HXT12YIL170W INP54Q08227 384 aaKnown RBP11.91□□□□□ -0.5
HXT12YIL170W AKL1P38080 1108 aaKnown RBP11.9□□□□□ -0.5
HXT12YIL170W UGA2P38067 497 aa11.89□□□□□ -0.51
HXT12YIL170W ALD2P47771 506 aa11.89□□□□□ -0.51
HXT12YIL170W OSM1P21375 501 aaKnown RBP11.88□□□□□ -0.51
HXT12YIL170W SSA2P10592 639 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms