RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W STR2P47164 639 aa8.35□□□□□ -1.07
IMP3YHR148W ISM1P48526 1002 aa8.35□□□□□ -1.07
IMP3YHR148W GLN1P32288 370 aaKnown RBP8.34□□□□□ -1.07
IMP3YHR148W TFB3Q03290 321 aa8.34□□□□□ -1.07
IMP3YHR148W ERF2Q06551 359 aa8.34□□□□□ -1.07
IMP3YHR148W YPR015CQ12531 247 aa8.34□□□□□ -1.07
IMP3YHR148W SSA2P10592 639 aaKnown RBP8.33□□□□□ -1.08
IMP3YHR148W KEX2P13134 814 aa8.33□□□□□ -1.08
IMP3YHR148W MMP1Q12372 583 aa8.33□□□□□ -1.08
IMP3YHR148W ESS1P22696 170 aa8.32□□□□□ -1.08
IMP3YHR148W PTC2P39966 464 aaKnown RBP8.32□□□□□ -1.08
IMP3YHR148W YNL115CP53925 644 aa8.3□□□□□ -1.08
IMP3YHR148W RTF1P53064 558 aa8.29□□□□□ -1.08
IMP3YHR148W YML082WQ04533 649 aaKnown RBP8.29□□□□□ -1.08
IMP3YHR148W BUD20Q08004 166 aaPredicted RBP8.29□□□□□ -1.08
IMP3YHR148W TY1A-DR4O74302 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-HP0C2I4 478 aaKnown RBP8.28□□□□□ -1.08
IMP3YHR148W TY1A-AP0CX57 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-PR1P0CX58 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-ORP0CX59 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-PR2P0CX60 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-DR5P0CX65 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-ER2P0CX66 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-GR3P0CX67 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-LR1P0CX68 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-MR2P0CX69 440 aa8.28□□□□□ -1.08
IMP3YHR148W PKC1P24583 1151 aa8.28□□□□□ -1.08
IMP3YHR148W YJU3P28321 313 aa8.28□□□□□ -1.08
IMP3YHR148W NPL4P33755 580 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-JR2P47099 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-DR1Q03856 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-ML1Q04706 440 aaKnown RBP8.28□□□□□ -1.08
IMP3YHR148W TY1A-BRQ12217 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-NL2Q12470 440 aa8.28□□□□□ -1.08
IMP3YHR148W TY1A-GR2Q12485 440 aa8.28□□□□□ -1.08
IMP3YHR148W SLY41P22215 453 aa8.27□□□□□ -1.09
IMP3YHR148W PKH3Q03306 898 aaPredicted RBP8.27□□□□□ -1.09
IMP3YHR148W BRL1P38770 471 aa8.26□□□□□ -1.09
IMP3YHR148W SEC2P17065 759 aa8.25□□□□□ -1.09
IMP3YHR148W GCD11P32481 527 aaKnown RBP8.24□□□□□ -1.09
IMP3YHR148W HGH1P48362 394 aaKnown RBP8.23□□□□□ -1.09
IMP3YHR148W RAD59Q12223 238 aa8.23□□□□□ -1.09
IMP3YHR148W VRP1P37370 817 aa8.21□□□□□ -1.1
IMP3YHR148W RSC30P38781 883 aa8.21□□□□□ -1.1
IMP3YHR148W AGE1Q04412 482 aa8.21□□□□□ -1.1
IMP3YHR148W PRT1P06103 763 aaKnown RBP8.19□□□□□ -1.1
IMP3YHR148W TRM1P15565 570 aaKnown RBP8.19□□□□□ -1.1
IMP3YHR148W ARG8P18544 423 aa8.18□□□□□ -1.1
IMP3YHR148W TUB4P53378 473 aa8.18□□□□□ -1.1
IMP3YHR148W XDJ1P39102 459 aa8.17□□□□□ -1.1
IMP3YHR148W LAM6Q08001 693 aa8.17□□□□□ -1.1
IMP3YHR148W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
IMP3YHR148W PUS6P53294 404 aa8.16□□□□□ -1.1
IMP3YHR148W YBL036CP38197 257 aa8.15□□□□□ -1.1
IMP3YHR148W PAC1P39946 494 aaKnown RBP8.14□□□□□ -1.11
IMP3YHR148W RRN7P40992 514 aa8.13□□□□□ -1.11
IMP3YHR148W YJL007CP47080 104 aa8.13□□□□□ -1.11
IMP3YHR148W BIO2P32451 375 aa8.12□□□□□ -1.11
IMP3YHR148W BIM1P40013 344 aa8.12□□□□□ -1.11
IMP3YHR148W GYP1Q08484 637 aa8.12□□□□□ -1.11
IMP3YHR148W TBF1Q02457 562 aa8.11□□□□□ -1.11
IMP3YHR148W ATG32P40458 529 aa8.1□□□□□ -1.11
IMP3YHR148W YDL206WQ12424 762 aa8.1□□□□□ -1.11
IMP3YHR148W RLF2Q12495 606 aa8.1□□□□□ -1.11
IMP3YHR148W CSE4P36012 229 aa8.09□□□□□ -1.11
IMP3YHR148W MAK16P10962 306 aaPredicted RBP8.08□□□□□ -1.12
IMP3YHR148W SAS4Q04003 481 aa8.08□□□□□ -1.12
IMP3YHR148W RPA14P50106 137 aa8.07□□□□□ -1.12
IMP3YHR148W PDC1P06169 563 aaKnown RBP8.06□□□□□ -1.12
IMP3YHR148W SDH2P21801 266 aa8.06□□□□□ -1.12
IMP3YHR148W SPT16P32558 1035 aaKnown RBP8.06□□□□□ -1.12
IMP3YHR148W PAT1P25644 796 aaKnown RBP8.05□□□□□ -1.12
IMP3YHR148W YNL108CP53929 270 aa8.04□□□□□ -1.12
IMP3YHR148W YPR097WQ06839 1073 aa8.04□□□□□ -1.12
IMP3YHR148W TIF1P10081 395 aaKnown RBP8.03□□□□□ -1.12
IMP3YHR148W YDJ1P25491 409 aaKnown RBP8.03□□□□□ -1.12
IMP3YHR148W ERG12P07277 443 aa8.02□□□□□ -1.13
IMP3YHR148W ALR1Q08269 859 aa8.02□□□□□ -1.13
IMP3YHR148W MOD5P07884 428 aa8.01□□□□□ -1.13
IMP3YHR148W SUP45P12385 437 aaKnown RBP8.01□□□□□ -1.13
IMP3YHR148W KXD1P53158 218 aa8.01□□□□□ -1.13
IMP3YHR148W DPS1P04802 557 aaKnown RBP8□□□□□ -1.13
IMP3YHR148W SPT5P27692 1063 aaKnown RBP8□□□□□ -1.13
IMP3YHR148W HXT10P43581 546 aa8□□□□□ -1.13
IMP3YHR148W ENO2P00925 437 aaKnown RBP7.98□□□□□ -1.13
IMP3YHR148W TPD3P31383 635 aa7.98□□□□□ -1.13
IMP3YHR148W RPL34BP40525 121 aaKnown RBP7.98□□□□□ -1.13
IMP3YHR148W NAF1P53919 492 aaKnown RBP7.98□□□□□ -1.13
IMP3YHR148W MRF1P30775 413 aaPredicted RBP7.97□□□□□ -1.13
IMP3YHR148W RRD1P40454 393 aaKnown RBP7.97□□□□□ -1.13
IMP3YHR148W FIG4P42837 879 aa7.96□□□□□ -1.14
IMP3YHR148W RTG2P32608 588 aaKnown RBP7.95□□□□□ -1.14
IMP3YHR148W CST6P40535 587 aa7.95□□□□□ -1.14
IMP3YHR148W YPR204WQ08995 1032 aa7.95□□□□□ -1.14
IMP3YHR148W MCM16Q12262 181 aa7.94□□□□□ -1.14
IMP3YHR148W BDP1P46678 594 aa7.93□□□□□ -1.14
IMP3YHR148W YPR084WQ06821 456 aa7.93□□□□□ -1.14
IMP3YHR148W TEC1P18412 486 aa7.92□□□□□ -1.14
IMP3YHR148W RIM21P48565 533 aa7.92□□□□□ -1.14
IMP3YHR148W ENO1P00924 437 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 162.8 ms