RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeastyeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDA3YHR009C CSE4P36012 229 aa6.49□□□□□ -1.37
TDA3YHR009C PKH3Q03306 898 aaPredicted RBP6.49□□□□□ -1.37
TDA3YHR009C CPS1P27614 576 aa6.48□□□□□ -1.37
TDA3YHR009C RTG2P32608 588 aaKnown RBP6.48□□□□□ -1.37
TDA3YHR009C TTI1P36097 1038 aa6.48□□□□□ -1.37
TDA3YHR009C YPR204WQ08995 1032 aa6.48□□□□□ -1.37
TDA3YHR009C RPP1BP10622 106 aaKnown RBP6.48□□□□□ -1.37
TDA3YHR009C SIT4P20604 311 aa6.47□□□□□ -1.37
TDA3YHR009C YNL108CP53929 270 aa6.47□□□□□ -1.37
TDA3YHR009C TFB4Q12004 338 aa6.47□□□□□ -1.37
TDA3YHR009C YJU3P28321 313 aa6.46□□□□□ -1.38
TDA3YHR009C CDC73Q06697 393 aa6.46□□□□□ -1.38
TDA3YHR009C SUP45P12385 437 aaKnown RBP6.44□□□□□ -1.38
TDA3YHR009C CHL1P22516 861 aaPredicted RBP6.44□□□□□ -1.38
TDA3YHR009C PEX29Q03370 554 aa6.44□□□□□ -1.38
TDA3YHR009C ARG8P18544 423 aa6.43□□□□□ -1.38
TDA3YHR009C PRE3P38624 215 aa6.43□□□□□ -1.38
TDA3YHR009C NOB1Q08444 459 aaKnown RBP6.43□□□□□ -1.38
TDA3YHR009C MID1P41821 548 aa6.42□□□□□ -1.38
TDA3YHR009C PEX21P50091 288 aa6.42□□□□□ -1.38
TDA3YHR009C TUM1Q08686 304 aaKnown RBP6.42□□□□□ -1.38
TDA3YHR009C RSC30P38781 883 aa6.41□□□□□ -1.38
TDA3YHR009C RPL34AP87262 121 aaPredicted RBP6.4□□□□□ -1.38
TDA3YHR009C ELP4Q02884 456 aaKnown RBP6.4□□□□□ -1.38
TDA3YHR009C ENO2P00925 437 aaKnown RBP6.4□□□□□ -1.39
TDA3YHR009C YDJ1P25491 409 aaKnown RBP6.4□□□□□ -1.39
TDA3YHR009C ENO1P00924 437 aaKnown RBP6.39□□□□□ -1.39
TDA3YHR009C SPT5P27692 1063 aaKnown RBP6.39□□□□□ -1.39
TDA3YHR009C SLY41P22215 453 aa6.38□□□□□ -1.39
TDA3YHR009C MRX10Q05648 414 aa6.38□□□□□ -1.39
TDA3YHR009C MAK16P10962 306 aaPredicted RBP6.37□□□□□ -1.39
TDA3YHR009C PUP1P25043 261 aa6.37□□□□□ -1.39
TDA3YHR009C CDC3P32457 520 aaKnown RBP6.37□□□□□ -1.39
TDA3YHR009C ARH1P48360 493 aa6.37□□□□□ -1.39
TDA3YHR009C LAM6Q08001 693 aa6.37□□□□□ -1.39
TDA3YHR009C SIS2P36024 562 aa6.36□□□□□ -1.39
TDA3YHR009C YML083CQ04526 418 aa6.36□□□□□ -1.39
TDA3YHR009C RIM21P48565 533 aa6.35□□□□□ -1.39
TDA3YHR009C YNL115CP53925 644 aa6.35□□□□□ -1.39
TDA3YHR009C DPL1Q05567 589 aa6.35□□□□□ -1.39
TDA3YHR009C YRR1Q12172 810 aa6.35□□□□□ -1.39
TDA3YHR009C SLD2P34252 453 aa6.35□□□□□ -1.39
TDA3YHR009C RTF1P53064 558 aa6.35□□□□□ -1.39
TDA3YHR009C MPC54Q08550 464 aa6.34□□□□□ -1.39
TDA3YHR009C BCK2P33306 851 aa6.33□□□□□ -1.4
TDA3YHR009C MRX12P47084 519 aa6.33□□□□□ -1.4
TDA3YHR009C HAP5Q02516 242 aa6.33□□□□□ -1.4
TDA3YHR009C TGL4P36165 910 aa6.32□□□□□ -1.4
TDA3YHR009C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
TDA3YHR009C YDR344CQ05510 147 aa6.32□□□□□ -1.4
TDA3YHR009C TRM1P15565 570 aaKnown RBP6.31□□□□□ -1.4
TDA3YHR009C SPT23P35210 1082 aa6.31□□□□□ -1.4
TDA3YHR009C SSF1P38789 453 aaPredicted RBP6.31□□□□□ -1.4
TDA3YHR009C NAF1P53919 492 aaKnown RBP6.31□□□□□ -1.4
TDA3YHR009C ISU2Q12056 156 aa6.31□□□□□ -1.4
TDA3YHR009C PEP12P32854 288 aa6.3□□□□□ -1.4
TDA3YHR009C YPP1P46951 817 aa6.3□□□□□ -1.4
TDA3YHR009C PUS6P53294 404 aa6.3□□□□□ -1.4
TDA3YHR009C NMA111P53920 997 aa6.29□□□□□ -1.4
TDA3YHR009C HAT1Q12341 374 aa6.29□□□□□ -1.4
TDA3YHR009C KEX2P13134 814 aa6.28□□□□□ -1.4
TDA3YHR009C ERF2Q06551 359 aa6.28□□□□□ -1.4
TDA3YHR009C RDS2P19541 446 aaKnown RBP6.27□□□□□ -1.41
TDA3YHR009C VRP1P37370 817 aa6.27□□□□□ -1.41
TDA3YHR009C BNI4P53858 892 aa6.27□□□□□ -1.41
TDA3YHR009C SEN54Q02825 467 aaPredicted RBP6.27□□□□□ -1.41
TDA3YHR009C MCM16Q12262 181 aa6.27□□□□□ -1.41
TDA3YHR009C NUD1P32336 851 aa6.27□□□□□ -1.41
TDA3YHR009C PTC2P39966 464 aaKnown RBP6.27□□□□□ -1.41
TDA3YHR009C ECM23Q02710 187 aa6.25□□□□□ -1.41
TDA3YHR009C HEM3P28789 327 aa6.24□□□□□ -1.41
TDA3YHR009C TBF1Q02457 562 aa6.24□□□□□ -1.41
TDA3YHR009C ISF1P32488 338 aa6.23□□□□□ -1.41
TDA3YHR009C KTR7P40504 517 aa6.23□□□□□ -1.41
TDA3YHR009C NPL4P33755 580 aa6.23□□□□□ -1.41
TDA3YHR009C SNU71P53207 620 aaKnown RBP6.23□□□□□ -1.41
TDA3YHR009C NOP7P53261 605 aaKnown RBP6.23□□□□□ -1.41
TDA3YHR009C GAL2P13181 574 aa6.22□□□□□ -1.41
TDA3YHR009C YML082WQ04533 649 aaKnown RBP6.22□□□□□ -1.41
TDA3YHR009C PDR1P12383 1068 aa6.21□□□□□ -1.42
TDA3YHR009C XDJ1P39102 459 aa6.21□□□□□ -1.42
TDA3YHR009C EMP47P43555 445 aa6.21□□□□□ -1.42
TDA3YHR009C ENV9Q08651 330 aa6.21□□□□□ -1.42
TDA3YHR009C YDL206WQ12424 762 aa6.21□□□□□ -1.42
TDA3YHR009C UBX7P38349 436 aa6.2□□□□□ -1.42
TDA3YHR009C STR2P47164 639 aa6.2□□□□□ -1.42
TDA3YHR009C ISM1P48526 1002 aa6.2□□□□□ -1.42
TDA3YHR009C ORC1P54784 914 aaPredicted RBP6.2□□□□□ -1.42
TDA3YHR009C AGE1Q04412 482 aa6.2□□□□□ -1.42
TDA3YHR009C AIM44Q99299 758 aa6.2□□□□□ -1.42
TDA3YHR009C TUB4P53378 473 aa6.19□□□□□ -1.42
TDA3YHR009C RRN6P32786 894 aa6.18□□□□□ -1.42
TDA3YHR009C STM1P39015 273 aaKnown RBP6.18□□□□□ -1.42
TDA3YHR009C YBL113CQ7M4S9 792 aa6.18□□□□□ -1.42
TDA3YHR009C RPA14P50106 137 aa6.18□□□□□ -1.42
TDA3YHR009C FRA1Q07825 749 aa6.18□□□□□ -1.42
TDA3YHR009C RAM1P22007 431 aa6.17□□□□□ -1.42
TDA3YHR009C YPR097WQ06839 1073 aa6.17□□□□□ -1.42
TDA3YHR009C TY1A-DR4O74302 440 aa6.16□□□□□ -1.42
TDA3YHR009C TY1A-HP0C2I4 478 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms