RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	ENO1	P00924	437 aa	Known RBP	4.32	□□□□□ -1.72
CCM1	YGR150C	CSE4	P36012	229 aa		4.32	□□□□□ -1.72
CCM1	YGR150C	TGL4	P36165	910 aa		4.32	□□□□□ -1.72
CCM1	YGR150C	ZDS1	P50111	915 aa	Known RBP	4.32	□□□□□ -1.72
CCM1	YGR150C	VHR2	P40041	505 aa		4.31	□□□□□ -1.72
CCM1	YGR150C	SEC8	P32855	1065 aa		4.31	□□□□□ -1.72
CCM1	YGR150C	YHL050C	P38721	697 aa		4.31	□□□□□ -1.72
CCM1	YGR150C	YHR219W	P38900	624 aa		4.31	□□□□□ -1.72
CCM1	YGR150C	TFG1	P41895	735 aa	Predicted RBP	4.31	□□□□□ -1.72
CCM1	YGR150C	OYE2	Q03558	400 aa	Known RBP	4.31	□□□□□ -1.72
CCM1	YGR150C	MRX10	Q05648	414 aa		4.31	□□□□□ -1.72
CCM1	YGR150C	JIP5	Q06214	492 aa	Predicted RBP	4.31	□□□□□ -1.72
CCM1	YGR150C	WHI5	Q12416	295 aa		4.31	□□□□□ -1.72
CCM1	YGR150C	STB3	Q12427	513 aa		4.31	□□□□□ -1.72
CCM1	YGR150C	YEL077C	Q3E7X8	1277 aa		4.31	□□□□□ -1.72
CCM1	YGR150C	TEA1	P47988	759 aa		4.3	□□□□□ -1.72
CCM1	YGR150C	ENO2	P00925	437 aa	Known RBP	4.3	□□□□□ -1.72
CCM1	YGR150C	SSB1	P11484	613 aa	Known RBP	4.3	□□□□□ -1.72
CCM1	YGR150C	BDF1	P35817	686 aa		4.3	□□□□□ -1.72
CCM1	YGR150C	MNN4	P36044	1178 aa		4.3	□□□□□ -1.72
CCM1	YGR150C	PMC1	P38929	1173 aa	Predicted RBP	4.3	□□□□□ -1.72
CCM1	YGR150C	SSB2	P40150	613 aa	Known RBP	4.3	□□□□□ -1.72
CCM1	YGR150C	TPM2	P40414	161 aa		4.3	□□□□□ -1.72
CCM1	YGR150C	ALG12	P53730	551 aa		4.3	□□□□□ -1.72
CCM1	YGR150C	CIT2	P08679	460 aa		4.29	□□□□□ -1.72
CCM1	YGR150C	TRL1	P09880	827 aa	Known RBP	4.29	□□□□□ -1.72
CCM1	YGR150C	SRP40	P32583	406 aa	Predicted RBP	4.29	□□□□□ -1.72
CCM1	YGR150C	PPX1	P38698	397 aa		4.29	□□□□□ -1.72
CCM1	YGR150C	RAD59	Q12223	238 aa		4.29	□□□□□ -1.72
CCM1	YGR150C	PTC3	P34221	468 aa	Known RBP	4.28	□□□□□ -1.72
CCM1	YGR150C	IOC3	P43596	787 aa		4.28	□□□□□ -1.72
CCM1	YGR150C	TGL3	P40308	642 aa		4.28	□□□□□ -1.72
CCM1	YGR150C	KRI1	P42846	591 aa	Known RBP	4.28	□□□□□ -1.72
CCM1	YGR150C	RIM21	P48565	533 aa		4.28	□□□□□ -1.72
CCM1	YGR150C	YOL057W	Q08225	711 aa		4.28	□□□□□ -1.72
CCM1	YGR150C	YDJ1	P25491	409 aa	Known RBP	4.27	□□□□□ -1.73
CCM1	YGR150C	STS1	P38637	319 aa		4.27	□□□□□ -1.73
CCM1	YGR150C	MDJ2	P42834	146 aa		4.27	□□□□□ -1.73
CCM1	YGR150C	YLR326W	Q06170	240 aa	Known RBP	4.27	□□□□□ -1.73
CCM1	YGR150C	YKL091C	P33324	310 aa	Known RBP	4.27	□□□□□ -1.73
CCM1	YGR150C	VAC8	P39968	578 aa		4.27	□□□□□ -1.73
CCM1	YGR150C	GRX4	P32642	244 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	KIC1	P38692	1080 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	ECM23	Q02710	187 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	KAR5	Q04746	504 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	GRS1	P38088	690 aa	Known RBP	4.26	□□□□□ -1.73
CCM1	YGR150C	TPS3	P38426	1054 aa	Known RBP	4.26	□□□□□ -1.73
CCM1	YGR150C	THI12	P42883	340 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	THI5	P43534	340 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	YJR107W	P47145	328 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
CCM1	YGR150C	THI11	P47183	340 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	ALD3	P54114	506 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	PKH3	Q03306	898 aa	Predicted RBP	4.26	□□□□□ -1.73
CCM1	YGR150C	POB3	Q04636	552 aa	Known RBP	4.26	□□□□□ -1.73
CCM1	YGR150C	THI13	Q07748	340 aa		4.26	□□□□□ -1.73
CCM1	YGR150C	MET1	P36150	593 aa		4.25	□□□□□ -1.73
CCM1	YGR150C	NOP2	P40991	618 aa	Known RBP	4.25	□□□□□ -1.73
CCM1	YGR150C	KIP3	P53086	805 aa	Known RBP	4.25	□□□□□ -1.73
CCM1	YGR150C	PEP12	P32854	288 aa		4.25	□□□□□ -1.73
CCM1	YGR150C	MGE1	P38523	228 aa		4.25	□□□□□ -1.73
CCM1	YGR150C	HST2	P53686	357 aa		4.25	□□□□□ -1.73
CCM1	YGR150C	BRE1	Q07457	700 aa	Known RBP	4.25	□□□□□ -1.73
CCM1	YGR150C	GAL11	P19659	1081 aa		4.24	□□□□□ -1.73
CCM1	YGR150C	SPT5	P27692	1063 aa	Known RBP	4.24	□□□□□ -1.73
CCM1	YGR150C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CCM1	YGR150C	RPN4	Q03465	531 aa		4.24	□□□□□ -1.73
CCM1	YGR150C	YDL121C	Q07541	149 aa		4.24	□□□□□ -1.73
CCM1	YGR150C	MNL2	Q12205	849 aa		4.24	□□□□□ -1.73
CCM1	YGR150C	ESS1	P22696	170 aa		4.23	□□□□□ -1.73
CCM1	YGR150C	ORC6	P38826	435 aa		4.23	□□□□□ -1.73
CCM1	YGR150C	TY4A-J	P47023	414 aa		4.23	□□□□□ -1.73
CCM1	YGR150C	NIS1	P53939	407 aa		4.23	□□□□□ -1.73
CCM1	YGR150C	ALD6	P54115	500 aa	Known RBP	4.23	□□□□□ -1.73
CCM1	YGR150C	NSE3	Q05541	303 aa		4.23	□□□□□ -1.73
CCM1	YGR150C	BUD6	P41697	788 aa		4.23	□□□□□ -1.73
CCM1	YGR150C	FPK1	P53739	893 aa		4.23	□□□□□ -1.73
CCM1	YGR150C	CWC15	Q03772	175 aa	Known RBP	4.23	□□□□□ -1.73
CCM1	YGR150C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CCM1	YGR150C	UBX7	P38349	436 aa		4.22	□□□□□ -1.73
CCM1	YGR150C	AIM21	P40563	679 aa		4.22	□□□□□ -1.73
CCM1	YGR150C	MMP1	Q12372	583 aa		4.22	□□□□□ -1.73
CCM1	YGR150C	RPA135	P22138	1203 aa	Known RBP	4.22	□□□□□ -1.73
CCM1	YGR150C	VMA4	P22203	233 aa	Known RBP	4.22	□□□□□ -1.73
CCM1	YGR150C	TOA1	P32773	286 aa		4.22	□□□□□ -1.73
CCM1	YGR150C	SLX5	P32828	619 aa	Known RBP	4.22	□□□□□ -1.73
CCM1	YGR150C	YGL081W	P53156	320 aa		4.22	□□□□□ -1.73
CCM1	YGR150C	RDS2	P19541	446 aa	Known RBP	4.21	□□□□□ -1.73
CCM1	YGR150C	DBP1	P24784	617 aa	Known RBP	4.21	□□□□□ -1.73
CCM1	YGR150C	SCJ1	P25303	377 aa		4.21	□□□□□ -1.73
CCM1	YGR150C	YJU3	P28321	313 aa		4.21	□□□□□ -1.73
CCM1	YGR150C	BOI2	P39969	1040 aa		4.21	□□□□□ -1.73
CCM1	YGR150C	YFR006W	P43590	535 aa		4.21	□□□□□ -1.73
CCM1	YGR150C	YFR016C	P43597	1233 aa	Known RBP	4.21	□□□□□ -1.73
CCM1	YGR150C	SSF2	Q12153	453 aa	Predicted RBP	4.21	□□□□□ -1.73
CCM1	YGR150C	ARG8	P18544	423 aa		4.21	□□□□□ -1.74
CCM1	YGR150C	RGR1	P19263	1082 aa		4.21	□□□□□ -1.74
CCM1	YGR150C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
CCM1	YGR150C	CLB5	P30283	435 aa		4.21	□□□□□ -1.74
CCM1	YGR150C	RAD54	P32863	898 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms