RNA–Protein interactions for RNA: YGR087C

PDC6, Transcript of Minor isoform of pyruvate decarboxylase, yeastyeast

Gene PDC6, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC6YGR087C MHP1P43638 1398 aa10.62□□□□□ -0.71
PDC6YGR087C PDS5Q04264 1277 aa10.6□□□□□ -0.71
PDC6YGR087C PSK1P31374 1356 aa10.57□□□□□ -0.72
PDC6YGR087C RTG3P38165 486 aa10.57□□□□□ -0.72
PDC6YGR087C LEU2P04173 364 aaPredicted RBP10.54□□□□□ -0.72
PDC6YGR087C FKH1P40466 484 aa10.53□□□□□ -0.72
PDC6YGR087C PTP3P40048 928 aa10.52□□□□□ -0.73
PDC6YGR087C LEU3P08638 886 aa10.51□□□□□ -0.73
PDC6YGR087C CSE4P36012 229 aa10.5□□□□□ -0.73
PDC6YGR087C MTR4P47047 1073 aaKnown RBP10.5□□□□□ -0.73
PDC6YGR087C PSD2P53037 1138 aaKnown RBP10.5□□□□□ -0.73
PDC6YGR087C YML133CQ03099 1374 aa10.5□□□□□ -0.73
PDC6YGR087C YLL067CQ07888 1374 aa10.5□□□□□ -0.73
PDC6YGR087C YLL066CQ99208 1374 aa10.5□□□□□ -0.73
PDC6YGR087C SPT7P35177 1332 aa10.49□□□□□ -0.73
PDC6YGR087C RPS24AP0CX31 135 aaKnown RBP10.48□□□□□ -0.73
PDC6YGR087C RPS24BP0CX32 135 aaKnown RBP10.48□□□□□ -0.73
PDC6YGR087C PRP45P28004 379 aaPredicted RBP10.48□□□□□ -0.73
PDC6YGR087C SEC3P33332 1336 aaKnown RBP10.47□□□□□ -0.73
PDC6YGR087C MLP1Q02455 1875 aaKnown RBP10.47□□□□□ -0.73
PDC6YGR087C ADE6P38972 1358 aaKnown RBP10.46□□□□□ -0.73
PDC6YGR087C APP1P53933 587 aa10.45□□□□□ -0.74
PDC6YGR087C NST1P53935 1240 aa10.45□□□□□ -0.74
PDC6YGR087C PDI1P17967 522 aaKnown RBP10.44□□□□□ -0.74
PDC6YGR087C PRP5P21372 849 aaPredicted RBP10.44□□□□□ -0.74
PDC6YGR087C ENT1Q12518 454 aa10.43□□□□□ -0.74
PDC6YGR087C REB1P21538 810 aa10.42□□□□□ -0.74
PDC6YGR087C RTF1P53064 558 aa10.42□□□□□ -0.74
PDC6YGR087C GAS4Q08271 471 aa10.42□□□□□ -0.74
PDC6YGR087C PRP43P53131 767 aaKnown RBP10.41□□□□□ -0.74
PDC6YGR087C YAH1Q12184 172 aaKnown RBP10.41□□□□□ -0.74
PDC6YGR087C TY4B-HP0C2J7 1802 aa10.41□□□□□ -0.74
PDC6YGR087C TY4B-JP47024 1803 aa10.41□□□□□ -0.74
PDC6YGR087C DPS1P04802 557 aaKnown RBP10.39□□□□□ -0.75
PDC6YGR087C MSB3P48566 633 aaPredicted RBP10.39□□□□□ -0.75
PDC6YGR087C HIM1Q06674 414 aa10.38□□□□□ -0.75
PDC6YGR087C KAR2P16474 682 aaKnown RBP10.38□□□□□ -0.75
PDC6YGR087C TAP42Q04372 366 aa10.37□□□□□ -0.75
PDC6YGR087C ENV9Q08651 330 aa10.37□□□□□ -0.75
PDC6YGR087C RRP5Q05022 1729 aaKnown RBP10.36□□□□□ -0.75
PDC6YGR087C TRK1P12685 1235 aa10.36□□□□□ -0.75
PDC6YGR087C YEF3P16521 1044 aaKnown RBP10.36□□□□□ -0.75
PDC6YGR087C GRX4P32642 244 aa10.36□□□□□ -0.75
PDC6YGR087C SLM3Q12093 417 aa10.34□□□□□ -0.75
PDC6YGR087C TCB1Q12466 1186 aa10.34□□□□□ -0.75
PDC6YGR087C PAP2P53632 584 aaKnown RBP10.33□□□□□ -0.76
PDC6YGR087C AUS1Q08409 1394 aa10.33□□□□□ -0.76
PDC6YGR087C IMH1Q06704 911 aaKnown RBP10.3□□□□□ -0.76
PDC6YGR087C ENP1P38333 483 aaKnown RBP10.28□□□□□ -0.76
PDC6YGR087C YIL055CP40523 627 aaKnown RBP10.28□□□□□ -0.76
PDC6YGR087C BUB1P41695 1021 aaKnown RBP RIP-Chip data10.28□□□□□ -0.76not detected
PDC6YGR087C XKS1P42826 600 aa10.27□□□□□ -0.77
PDC6YGR087C YRF1-2P40105 1681 aa10.26□□□□□ -0.77
PDC6YGR087C IES2P40154 320 aa10.25□□□□□ -0.77
PDC6YGR087C YIL177CP40434 1758 aa10.25□□□□□ -0.77
PDC6YGR087C YJL225CP40889 1758 aa10.25□□□□□ -0.77
PDC6YGR087C RSF2P46974 1380 aa10.24□□□□□ -0.77
PDC6YGR087C RPO41P13433 1351 aaKnown RBP10.23□□□□□ -0.77
PDC6YGR087C RRP46P53256 223 aaPredicted RBP10.22□□□□□ -0.77
PDC6YGR087C RTR1P40084 226 aaPredicted RBP10.21□□□□□ -0.78
PDC6YGR087C NSR1P27476 414 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
PDC6YGR087C RCR1P38212 213 aa10.2□□□□□ -0.78
PDC6YGR087C FKS3Q04952 1785 aa10.2□□□□□ -0.78
PDC6YGR087C AKL1P38080 1108 aaKnown RBP10.19□□□□□ -0.78
PDC6YGR087C URB1P34241 1764 aaKnown RBP10.19□□□□□ -0.78
PDC6YGR087C HSP104P31539 908 aaKnown RBP10.18□□□□□ -0.78
PDC6YGR087C YKL133CP36066 463 aa10.18□□□□□ -0.78
PDC6YGR087C MPP10P47083 593 aaKnown RBP10.18□□□□□ -0.78
PDC6YGR087C DSD1P53095 428 aa10.18□□□□□ -0.78
PDC6YGR087C YDL144CQ07589 356 aa10.18□□□□□ -0.78
PDC6YGR087C APC1P53886 1748 aa10.17□□□□□ -0.78
PDC6YGR087C DOT5P40553 215 aa10.15□□□□□ -0.78
PDC6YGR087C IOC4Q04213 475 aa10.15□□□□□ -0.78
PDC6YGR087C PRD1P25375 712 aa10.15□□□□□ -0.79
PDC6YGR087C GLN1P32288 370 aaKnown RBP10.15□□□□□ -0.79
PDC6YGR087C MEC3Q02574 474 aa10.15□□□□□ -0.79
PDC6YGR087C SNF2P22082 1703 aa10.14□□□□□ -0.79
PDC6YGR087C ROM2P51862 1356 aaKnown RBP10.14□□□□□ -0.79
PDC6YGR087C SIR4P11978 1358 aa10.13□□□□□ -0.79
PDC6YGR087C ADE16P54113 591 aaKnown RBP10.12□□□□□ -0.79
PDC6YGR087C FRK1Q03002 865 aaPredicted RBP10.12□□□□□ -0.79
PDC6YGR087C FOX2Q02207 900 aaKnown RBP10.12□□□□□ -0.79
PDC6YGR087C YMR074CQ04773 145 aa10.12□□□□□ -0.79
PDC6YGR087C YRF1-3P0CX14 1859 aa10.11□□□□□ -0.79
PDC6YGR087C YRF1-7P0CX15 1859 aa10.11□□□□□ -0.79
PDC6YGR087C YRF1-6P53819 1859 aa10.11□□□□□ -0.79
PDC6YGR087C AOS1Q06624 347 aa10.11□□□□□ -0.79
PDC6YGR087C YRF1-4O13559 1382 aa10.11□□□□□ -0.79
PDC6YGR087C COBP00163 385 aa10.1□□□□□ -0.79
PDC6YGR087C NTH2P35172 780 aa10.1□□□□□ -0.79
PDC6YGR087C THI22Q06490 572 aa10.1□□□□□ -0.79
PDC6YGR087C ATG13Q06628 738 aa10.1□□□□□ -0.79
PDC6YGR087C PRS1P32895 427 aaKnown RBP10.09□□□□□ -0.79
PDC6YGR087C VPS27P40343 622 aaKnown RBP10.09□□□□□ -0.79
PDC6YGR087C RPN11P43588 306 aaKnown RBP10.09□□□□□ -0.79
PDC6YGR087C CTF4Q01454 927 aa10.09□□□□□ -0.79
PDC6YGR087C INP54Q08227 384 aaKnown RBP10.09□□□□□ -0.79
PDC6YGR087C RPP0P05317 312 aaKnown RBP10.09□□□□□ -0.79
PDC6YGR087C TPD3P31383 635 aa10.08□□□□□ -0.8
PDC6YGR087C SAP155P43612 1002 aa10.08□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms