RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XRN1	YGL173C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
XRN1	YGL173C	RRP15	Q06511	250 aa	Predicted RBP	4.19	□□□□□ -1.74
XRN1	YGL173C	TOP2	P06786	1428 aa	Known RBP	4.19	□□□□□ -1.74
XRN1	YGL173C	STM1	P39015	273 aa	Known RBP	4.19	□□□□□ -1.74
XRN1	YGL173C	YAH1	Q12184	172 aa	Known RBP	4.19	□□□□□ -1.74
XRN1	YGL173C	RMD1	Q03441	430 aa		4.19	□□□□□ -1.74
XRN1	YGL173C	COQ8	P27697	501 aa		4.18	□□□□□ -1.74
XRN1	YGL173C	PPX1	P38698	397 aa		4.18	□□□□□ -1.74
XRN1	YGL173C	IES2	P40154	320 aa		4.18	□□□□□ -1.74
XRN1	YGL173C	YJL049W	P47048	450 aa		4.18	□□□□□ -1.74
XRN1	YGL173C	NAF1	P53919	492 aa	Known RBP	4.18	□□□□□ -1.74
XRN1	YGL173C	GAP1	P19145	602 aa	Predicted RBP	4.18	□□□□□ -1.74
XRN1	YGL173C	GLN1	P32288	370 aa	Known RBP	4.17	□□□□□ -1.74
XRN1	YGL173C	YAF9	P53930	226 aa		4.17	□□□□□ -1.74
XRN1	YGL173C	SNQ2	P32568	1501 aa	Known RBP	4.17	□□□□□ -1.74
XRN1	YGL173C	DIT2	P21595	489 aa		4.16	□□□□□ -1.74
XRN1	YGL173C	YFR006W	P43590	535 aa		4.16	□□□□□ -1.74
XRN1	YGL173C	YDR090C	Q03193	310 aa		4.16	□□□□□ -1.74
XRN1	YGL173C	VPS29	P38759	282 aa		4.16	□□□□□ -1.74
XRN1	YGL173C	NNF1	P47149	201 aa		4.16	□□□□□ -1.74
XRN1	YGL173C	MNN4	P36044	1178 aa		4.16	□□□□□ -1.74
XRN1	YGL173C	SNT2	P53127	1403 aa		4.15	□□□□□ -1.74
XRN1	YGL173C	GLC3	P32775	704 aa		4.15	□□□□□ -1.74
XRN1	YGL173C	ENP1	P38333	483 aa	Known RBP	4.15	□□□□□ -1.74
XRN1	YGL173C	FPR3	P38911	411 aa	Known RBP	4.15	□□□□□ -1.74
XRN1	YGL173C	TFB3	Q03290	321 aa		4.15	□□□□□ -1.75
XRN1	YGL173C	SUP45	P12385	437 aa	Known RBP	4.15	□□□□□ -1.75
XRN1	YGL173C	TTI1	P36097	1038 aa		4.14	□□□□□ -1.75
XRN1	YGL173C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
XRN1	YGL173C	SCT1	P32784	759 aa		4.14	□□□□□ -1.75
XRN1	YGL173C	YPP1	P46951	817 aa		4.14	□□□□□ -1.75
XRN1	YGL173C	SPO14	P36126	1683 aa		4.14	□□□□□ -1.75
XRN1	YGL173C	HST2	P53686	357 aa		4.14	□□□□□ -1.75
XRN1	YGL173C	MMS22	Q06164	1454 aa		4.14	□□□□□ -1.75
XRN1	YGL173C	UTP13	Q05946	817 aa	Known RBP	4.14	□□□□□ -1.75
XRN1	YGL173C	DNF1	P32660	1571 aa		4.14	□□□□□ -1.75
XRN1	YGL173C	UBP10	P53874	792 aa	Predicted RBP	4.13	□□□□□ -1.75
XRN1	YGL173C	PDR12	Q02785	1511 aa		4.13	□□□□□ -1.75
XRN1	YGL173C	PDR5	P33302	1511 aa	Known RBP	4.13	□□□□□ -1.75
XRN1	YGL173C	ATF2	P53296	535 aa		4.13	□□□□□ -1.75
XRN1	YGL173C	PUF6	Q04373	656 aa	Known RBP	4.12	□□□□□ -1.75
XRN1	YGL173C	MRX10	Q05648	414 aa		4.12	□□□□□ -1.75
XRN1	YGL173C	LTE1	P07866	1435 aa		4.12	□□□□□ -1.75
XRN1	YGL173C	SIT4	P20604	311 aa		4.12	□□□□□ -1.75
XRN1	YGL173C	UBP14	P38237	781 aa	Known RBP	4.12	□□□□□ -1.75
XRN1	YGL173C	EPS1	P40557	701 aa		4.12	□□□□□ -1.75
XRN1	YGL173C	YJR107W	P47145	328 aa		4.12	□□□□□ -1.75
XRN1	YGL173C	MSC6	Q08818	692 aa	Known RBP	4.12	□□□□□ -1.75
XRN1	YGL173C	PEP12	P32854	288 aa		4.11	□□□□□ -1.75
XRN1	YGL173C	RRP14	P36080	434 aa	Known RBP	4.11	□□□□□ -1.75
XRN1	YGL173C	RTF1	P53064	558 aa		4.11	□□□□□ -1.75
XRN1	YGL173C	MRPL32	P25348	183 aa		4.11	□□□□□ -1.75
XRN1	YGL173C	BCH2	P36122	765 aa		4.11	□□□□□ -1.75
XRN1	YGL173C	ORC6	P38826	435 aa		4.11	□□□□□ -1.75
XRN1	YGL173C	SUB1	P54000	292 aa	Known RBP	4.11	□□□□□ -1.75
XRN1	YGL173C	UTP14	Q04500	899 aa	Known RBP	4.11	□□□□□ -1.75
XRN1	YGL173C	GEA2	P39993	1459 aa	Known RBP	4.11	□□□□□ -1.75
XRN1	YGL173C	SAM3	Q08986	587 aa		4.11	□□□□□ -1.75
XRN1	YGL173C	PAF1	P38351	445 aa		4.11	□□□□□ -1.75
XRN1	YGL173C	VPS72	Q03388	795 aa		4.1	□□□□□ -1.75
XRN1	YGL173C	UFD4	P33202	1483 aa		4.1	□□□□□ -1.75
XRN1	YGL173C	SPC42	P36094	363 aa		4.1	□□□□□ -1.75
XRN1	YGL173C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
XRN1	YGL173C	CHC1	P22137	1653 aa	Known RBP	4.1	□□□□□ -1.75
XRN1	YGL173C	BRN1	P38170	754 aa		4.1	□□□□□ -1.75
XRN1	YGL173C	BIM1	P40013	344 aa		4.09	□□□□□ -1.75
XRN1	YGL173C	CSN12	P47130	423 aa		4.09	□□□□□ -1.75
XRN1	YGL173C	NOB1	Q08444	459 aa	Known RBP	4.09	□□□□□ -1.75
XRN1	YGL173C	TSR3	Q12094	313 aa	Known RBP	4.09	□□□□□ -1.75
XRN1	YGL173C	VTH1	P40438	1549 aa		4.09	□□□□□ -1.75
XRN1	YGL173C	VTH2	P40890	1549 aa		4.09	□□□□□ -1.75
XRN1	YGL173C	NST1	P53935	1240 aa		4.09	□□□□□ -1.75
XRN1	YGL173C	DRS2	P39524	1355 aa		4.09	□□□□□ -1.76
XRN1	YGL173C	ACF4	P47129	309 aa		4.09	□□□□□ -1.76
XRN1	YGL173C	MET5	P47169	1442 aa		4.08	□□□□□ -1.76
XRN1	YGL173C	RRN6	P32786	894 aa		4.08	□□□□□ -1.76
XRN1	YGL173C	SWE1	P32944	819 aa		4.08	□□□□□ -1.76
XRN1	YGL173C	RSC30	P38781	883 aa		4.08	□□□□□ -1.76
XRN1	YGL173C	ATG36	P46983	293 aa		4.08	□□□□□ -1.76
XRN1	YGL173C	RIM21	P48565	533 aa		4.08	□□□□□ -1.76
XRN1	YGL173C	ATG1	P53104	897 aa		4.08	□□□□□ -1.76
XRN1	YGL173C	CWC15	Q03772	175 aa	Known RBP	4.08	□□□□□ -1.76
XRN1	YGL173C	GDB1	Q06625	1536 aa		4.08	□□□□□ -1.76
XRN1	YGL173C	TIF1	P10081	395 aa	Known RBP	4.07	□□□□□ -1.76
XRN1	YGL173C	BDF1	P35817	686 aa		4.07	□□□□□ -1.76
XRN1	YGL173C	MMS1	Q06211	1407 aa		4.07	□□□□□ -1.76
XRN1	YGL173C	PTC3	P34221	468 aa	Known RBP	4.07	□□□□□ -1.76
XRN1	YGL173C	HAP1	P0CE41	1502 aa		4.07	□□□□□ -1.76
XRN1	YGL173C	TRM732	Q03496	1420 aa		4.07	□□□□□ -1.76
XRN1	YGL173C	GUT1	P32190	709 aa		4.07	□□□□□ -1.76
XRN1	YGL173C	EDS1	P38073	919 aa		4.07	□□□□□ -1.76
XRN1	YGL173C	TRL1	P09880	827 aa	Known RBP	4.06	□□□□□ -1.76
XRN1	YGL173C	MNR2	P35724	969 aa		4.06	□□□□□ -1.76
XRN1	YGL173C	RPN4	Q03465	531 aa		4.06	□□□□□ -1.76
XRN1	YGL173C	YLR326W	Q06170	240 aa	Known RBP	4.06	□□□□□ -1.76
XRN1	YGL173C	MET10	P39692	1035 aa		4.06	□□□□□ -1.76
XRN1	YGL173C	PAN1	P32521	1480 aa		4.06	□□□□□ -1.76
XRN1	YGL173C	MRM1	P25270	412 aa		4.06	□□□□□ -1.76
XRN1	YGL173C	DOP1	Q03921	1698 aa		4.06	□□□□□ -1.76
XRN1	YGL173C	NUG1	P40010	520 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms