RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W SUI2P20459 304 aaKnown RBP6.15□□□□□ -1.42
RPL28YGL103W YGL015CP33199 130 aa6.15□□□□□ -1.42
RPL28YGL103W CHZ1P40019 153 aaPredicted RBP6.15□□□□□ -1.42
RPL28YGL103W MPP10P47083 593 aaKnown RBP6.15□□□□□ -1.42
RPL28YGL103W TAF8Q03750 510 aa6.15□□□□□ -1.42
RPL28YGL103W MET5P47169 1442 aa6.15□□□□□ -1.43
RPL28YGL103W TRK1P12685 1235 aa6.14□□□□□ -1.43
RPL28YGL103W DOP1Q03921 1698 aa6.14□□□□□ -1.43
RPL28YGL103W MNN4P36044 1178 aa6.13□□□□□ -1.43
RPL28YGL103W RAD2P07276 1031 aa6.12□□□□□ -1.43
RPL28YGL103W NAP1P25293 417 aaKnown RBP6.12□□□□□ -1.43
RPL28YGL103W FKH1P40466 484 aa6.12□□□□□ -1.43
RPL28YGL103W DNF2Q12675 1612 aa6.11□□□□□ -1.43
RPL28YGL103W YAP3P38749 330 aa6.11□□□□□ -1.43
RPL28YGL103W SNF7P39929 240 aaKnown RBP6.11□□□□□ -1.43
RPL28YGL103W RTR1P40084 226 aaPredicted RBP6.11□□□□□ -1.43
RPL28YGL103W NUP192P47054 1683 aa6.1□□□□□ -1.43
RPL28YGL103W NUP188P52593 1655 aaKnown RBP6.1□□□□□ -1.43
RPL28YGL103W YEF3P16521 1044 aaKnown RBP6.1□□□□□ -1.43
RPL28YGL103W RAD9P14737 1309 aa6.09□□□□□ -1.43
RPL28YGL103W DAL5P15365 543 aa6.09□□□□□ -1.43
RPL28YGL103W ABP1P15891 592 aaKnown RBP6.09□□□□□ -1.43
RPL28YGL103W YIR014WP40570 242 aa6.09□□□□□ -1.43
RPL28YGL103W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
RPL28YGL103W IOC4Q04213 475 aa6.09□□□□□ -1.43
RPL28YGL103W TRM3Q07527 1436 aa6.08□□□□□ -1.44
RPL28YGL103W KAR2P16474 682 aaKnown RBP6.08□□□□□ -1.44
RPL28YGL103W DJP1P40564 432 aa6.08□□□□□ -1.44
RPL28YGL103W SAP155P43612 1002 aa6.08□□□□□ -1.44
RPL28YGL103W ALD4P46367 519 aaKnown RBP6.08□□□□□ -1.44
RPL28YGL103W TPD3P31383 635 aa6.07□□□□□ -1.44
RPL28YGL103W TYS1P36421 394 aaKnown RBP6.07□□□□□ -1.44
RPL28YGL103W BUD27P43573 796 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
RPL28YGL103W SNF2P22082 1703 aa6.07□□□□□ -1.44
RPL28YGL103W SEC7P11075 2009 aaKnown RBP6.06□□□□□ -1.44
RPL28YGL103W PCT1P13259 424 aa6.06□□□□□ -1.44
RPL28YGL103W ROX1P25042 368 aa6.06□□□□□ -1.44
RPL28YGL103W PAP2P53632 584 aaKnown RBP6.06□□□□□ -1.44
RPL28YGL103W CAB1Q04430 367 aa6.06□□□□□ -1.44
RPL28YGL103W URN1Q06525 465 aaKnown RBP6.05□□□□□ -1.44
RPL28YGL103W BCK1Q01389 1478 aa6.04□□□□□ -1.44
RPL28YGL103W VPS24P36095 224 aaKnown RBP6.04□□□□□ -1.44
RPL28YGL103W IPL1P38991 367 aa6.04□□□□□ -1.44
RPL28YGL103W YIL092WP40497 633 aa6.04□□□□□ -1.44
RPL28YGL103W DIP2Q12220 943 aaPredicted RBP6.04□□□□□ -1.44
RPL28YGL103W KRE5P22023 1365 aa6.04□□□□□ -1.44
RPL28YGL103W CSE4P36012 229 aa6.03□□□□□ -1.44
RPL28YGL103W POL32P47110 350 aa6.03□□□□□ -1.44
RPL28YGL103W RRP46P53256 223 aaPredicted RBP6.03□□□□□ -1.44
RPL28YGL103W YML133CQ03099 1374 aa6.03□□□□□ -1.44
RPL28YGL103W YLL067CQ07888 1374 aa6.03□□□□□ -1.44
RPL28YGL103W YLL066CQ99208 1374 aa6.03□□□□□ -1.44
RPL28YGL103W PUF6Q04373 656 aaKnown RBP6.02□□□□□ -1.45
RPL28YGL103W THI22Q06490 572 aa6.02□□□□□ -1.45
RPL28YGL103W MAK21Q12176 1025 aaKnown RBP6.02□□□□□ -1.45
RPL28YGL103W MLP1Q02455 1875 aaKnown RBP6.01□□□□□ -1.45
RPL28YGL103W PRD1P25375 712 aa6.01□□□□□ -1.45
RPL28YGL103W SLN1P39928 1220 aaPredicted RBP6.01□□□□□ -1.45
RPL28YGL103W TCB2P48231 1178 aa6.01□□□□□ -1.45
RPL28YGL103W LEO1P38439 464 aa6□□□□□ -1.45
RPL28YGL103W MRX12P47084 519 aa6□□□□□ -1.45
RPL28YGL103W RLF2Q12495 606 aa6□□□□□ -1.45
RPL28YGL103W HAP1P0CE41 1502 aa5.99□□□□□ -1.45
RPL28YGL103W PDI1P17967 522 aaKnown RBP5.99□□□□□ -1.45
RPL28YGL103W RCM1P53972 490 aa5.99□□□□□ -1.45
RPL28YGL103W RTT109Q07794 436 aa5.99□□□□□ -1.45
RPL28YGL103W MSP1P28737 362 aa5.98□□□□□ -1.45
RPL28YGL103W ARL1P38116 183 aaKnown RBP5.98□□□□□ -1.45
RPL28YGL103W RTF1P53064 558 aa5.98□□□□□ -1.45
RPL28YGL103W HEF3P53978 1044 aaKnown RBP5.98□□□□□ -1.45
RPL28YGL103W HIM1Q06674 414 aa5.98□□□□□ -1.45
RPL28YGL103W SIR4P11978 1358 aa5.97□□□□□ -1.45
RPL28YGL103W ITC1P53125 1264 aa5.97□□□□□ -1.45
RPL28YGL103W TAP42Q04372 366 aa5.97□□□□□ -1.45
RPL28YGL103W LSP1Q12230 341 aaKnown RBP5.96□□□□□ -1.46
RPL28YGL103W TRP5P00931 707 aaKnown RBP5.95□□□□□ -1.46
RPL28YGL103W GRX4P32642 244 aa5.95□□□□□ -1.46
RPL28YGL103W ECM16Q04217 1267 aaKnown RBP5.95□□□□□ -1.46
RPL28YGL103W PSK1P31374 1356 aa5.94□□□□□ -1.46
RPL28YGL103W LEU2P04173 364 aaPredicted RBP5.94□□□□□ -1.46
RPL28YGL103W PPH3P32345 308 aa5.94□□□□□ -1.46
RPL28YGL103W RIA1P53893 1110 aa5.94□□□□□ -1.46
RPL28YGL103W COG8Q04632 607 aa5.94□□□□□ -1.46
RPL28YGL103W YRF1-4O13559 1382 aa5.93□□□□□ -1.46
RPL28YGL103W EDE1P34216 1381 aa5.93□□□□□ -1.46
RPL28YGL103W SRS2P12954 1174 aa5.93□□□□□ -1.46
RPL28YGL103W REB1P21538 810 aa5.93□□□□□ -1.46
RPL28YGL103W RAD50P12753 1312 aa5.93□□□□□ -1.46
RPL28YGL103W NOT3P06102 836 aaKnown RBP5.92□□□□□ -1.46
RPL28YGL103W TEA1P47988 759 aa5.92□□□□□ -1.46
RPL28YGL103W GAS4Q08271 471 aa5.92□□□□□ -1.46
RPL28YGL103W AUS1Q08409 1394 aa5.92□□□□□ -1.46
RPL28YGL103W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
RPL28YGL103W MTR4P47047 1073 aaKnown RBP5.91□□□□□ -1.46
RPL28YGL103W NKP2Q06162 153 aa5.91□□□□□ -1.46
RPL28YGL103W DNF3Q12674 1656 aa5.91□□□□□ -1.46
RPL28YGL103W YBR287WP38355 427 aa5.9□□□□□ -1.46
RPL28YGL103W NMD2P38798 1089 aaKnown RBP5.9□□□□□ -1.46
RPL28YGL103W YNG2P38806 282 aaKnown RBP5.9□□□□□ -1.46
RPL28YGL103W RRT14P40470 206 aa5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms