RNA–Protein interactions for RNA: YFR009W

GCN20, Transcript of Positive regulator of the Gcn2p kinase activity, yeastyeast

Gene GCN20, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GCN20YFR009W SNF2P22082 1703 aa6.14□□□□□ -1.43
GCN20YFR009W CFT1Q06632 1357 aaKnown RBP6.14□□□□□ -1.43
GCN20YFR009W MRX12P47084 519 aa6.14□□□□□ -1.43
GCN20YFR009W YDL144CQ07589 356 aa6.14□□□□□ -1.43
GCN20YFR009W RVB2Q12464 471 aaKnown RBP6.14□□□□□ -1.43
GCN20YFR009W FPR3P38911 411 aaKnown RBP6.13□□□□□ -1.43
GCN20YFR009W PSK1P31374 1356 aa6.13□□□□□ -1.43
GCN20YFR009W YEF3P16521 1044 aaKnown RBP6.13□□□□□ -1.43
GCN20YFR009W YML133CQ03099 1374 aa6.12□□□□□ -1.43
GCN20YFR009W YLL067CQ07888 1374 aa6.12□□□□□ -1.43
GCN20YFR009W YLL066CQ99208 1374 aa6.12□□□□□ -1.43
GCN20YFR009W TRK1P12685 1235 aa6.11□□□□□ -1.43
GCN20YFR009W DNF3Q12674 1656 aa6.1□□□□□ -1.43
GCN20YFR009W TAP42Q04372 366 aa6.09□□□□□ -1.43
GCN20YFR009W SUI2P20459 304 aaKnown RBP6.09□□□□□ -1.44
GCN20YFR009W KRE5P22023 1365 aa6.09□□□□□ -1.44
GCN20YFR009W KAR2P16474 682 aaKnown RBP6.08□□□□□ -1.44
GCN20YFR009W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
GCN20YFR009W PDI1P17967 522 aaKnown RBP6.08□□□□□ -1.44
GCN20YFR009W RTR1P40084 226 aaPredicted RBP6.08□□□□□ -1.44
GCN20YFR009W MPP10P47083 593 aaKnown RBP6.08□□□□□ -1.44
GCN20YFR009W RIA1P53893 1110 aa6.08□□□□□ -1.44
GCN20YFR009W RPC31P17890 251 aa6.07□□□□□ -1.44
GCN20YFR009W FUN12P39730 1002 aaKnown RBP6.07□□□□□ -1.44
GCN20YFR009W RCM1P53972 490 aa6.07□□□□□ -1.44
GCN20YFR009W GRX4P32642 244 aa6.06□□□□□ -1.44
GCN20YFR009W LEU2P04173 364 aaPredicted RBP6.06□□□□□ -1.44
GCN20YFR009W RTF1P53064 558 aa6.06□□□□□ -1.44
GCN20YFR009W MTR4P47047 1073 aaKnown RBP6.05□□□□□ -1.44
GCN20YFR009W RAD2P07276 1031 aa6.05□□□□□ -1.44
GCN20YFR009W PPH3P32345 308 aa6.05□□□□□ -1.44
GCN20YFR009W BUD27P43573 796 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
GCN20YFR009W RRP46P53256 223 aaPredicted RBP6.05□□□□□ -1.44
GCN20YFR009W SAP155P43612 1002 aa6.04□□□□□ -1.44
GCN20YFR009W MAK10Q02197 733 aa6.04□□□□□ -1.44
GCN20YFR009W PRD1P25375 712 aa6.03□□□□□ -1.44
GCN20YFR009W CPS1P27614 576 aa6.03□□□□□ -1.44
GCN20YFR009W SIR4P11978 1358 aa6.03□□□□□ -1.44
GCN20YFR009W PAP2P53632 584 aaKnown RBP6.02□□□□□ -1.44
GCN20YFR009W USO1P25386 1790 aa6.02□□□□□ -1.45
GCN20YFR009W ABP1P15891 592 aaKnown RBP6.02□□□□□ -1.45
GCN20YFR009W YNR029CP53729 429 aaKnown RBP6.02□□□□□ -1.45
GCN20YFR009W TY1B-NL2Q99337 1749 aaKnown RBP6.02□□□□□ -1.45
GCN20YFR009W YRF1-4O13559 1382 aa6.02□□□□□ -1.45
GCN20YFR009W AUS1Q08409 1394 aa6.02□□□□□ -1.45
GCN20YFR009W TPD3P31383 635 aa6.01□□□□□ -1.45
GCN20YFR009W THI22Q06490 572 aa6.01□□□□□ -1.45
GCN20YFR009W RPO41P13433 1351 aaKnown RBP6□□□□□ -1.45
GCN20YFR009W PRP43P53131 767 aaKnown RBP6□□□□□ -1.45
GCN20YFR009W HIM1Q06674 414 aa6□□□□□ -1.45
GCN20YFR009W MAK21Q12176 1025 aaKnown RBP6□□□□□ -1.45
GCN20YFR009W YIR014WP40570 242 aa6□□□□□ -1.45
GCN20YFR009W HEF3P53978 1044 aaKnown RBP6□□□□□ -1.45
GCN20YFR009W DIP2Q12220 943 aaPredicted RBP6□□□□□ -1.45
GCN20YFR009W YIL092WP40497 633 aa5.99□□□□□ -1.45
GCN20YFR009W ADE6P38972 1358 aaKnown RBP5.98□□□□□ -1.45
GCN20YFR009W IME2P32581 645 aa5.97□□□□□ -1.45
GCN20YFR009W APC1P53886 1748 aa5.97□□□□□ -1.45
GCN20YFR009W CSE4P36012 229 aa5.97□□□□□ -1.45
GCN20YFR009W OPY1P38271 328 aa5.97□□□□□ -1.45
GCN20YFR009W RTT109Q07794 436 aa5.97□□□□□ -1.45
GCN20YFR009W DAL5P15365 543 aa5.96□□□□□ -1.45
GCN20YFR009W YFR016CP43597 1233 aaKnown RBP5.96□□□□□ -1.46
GCN20YFR009W POL32P47110 350 aa5.96□□□□□ -1.46
GCN20YFR009W EAF7P53911 425 aaKnown RBP5.96□□□□□ -1.46
GCN20YFR009W RPS24AP0CX31 135 aaKnown RBP5.95□□□□□ -1.46
GCN20YFR009W RPS24BP0CX32 135 aaKnown RBP5.95□□□□□ -1.46
GCN20YFR009W AVT3P36062 692 aa5.95□□□□□ -1.46
GCN20YFR009W DPS1P04802 557 aaKnown RBP5.94□□□□□ -1.46
GCN20YFR009W GAS4Q08271 471 aa5.94□□□□□ -1.46
GCN20YFR009W AKL1P38080 1108 aaKnown RBP5.94□□□□□ -1.46
GCN20YFR009W MAM1P40065 302 aa5.93□□□□□ -1.46
GCN20YFR009W YNL050CP53952 270 aa5.93□□□□□ -1.46
GCN20YFR009W YMR196WQ04336 1088 aa5.93□□□□□ -1.46
GCN20YFR009W GYP7P48365 746 aa5.92□□□□□ -1.46
GCN20YFR009W ECM16Q04217 1267 aaKnown RBP5.92□□□□□ -1.46
GCN20YFR009W YRF1-2P40105 1681 aa5.92□□□□□ -1.46
GCN20YFR009W CLC1P17891 233 aa5.92□□□□□ -1.46
GCN20YFR009W EDE1P34216 1381 aa5.91□□□□□ -1.46
GCN20YFR009W PUF6Q04373 656 aaKnown RBP5.91□□□□□ -1.46
GCN20YFR009W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
GCN20YFR009W ZDS1P50111 915 aaKnown RBP5.91□□□□□ -1.46
GCN20YFR009W DSD1P53095 428 aa5.91□□□□□ -1.46
GCN20YFR009W NTH2P35172 780 aa5.89□□□□□ -1.47
GCN20YFR009W CTF4Q01454 927 aa5.89□□□□□ -1.47
GCN20YFR009W TY4B-HP0C2J7 1802 aa5.89□□□□□ -1.47
GCN20YFR009W TY4B-JP47024 1803 aa5.89□□□□□ -1.47
GCN20YFR009W RRT14P40470 206 aa5.88□□□□□ -1.47
GCN20YFR009W TRP5P00931 707 aaKnown RBP5.88□□□□□ -1.47
GCN20YFR009W SNF7P39929 240 aaKnown RBP5.88□□□□□ -1.47
GCN20YFR009W YPP1P46951 817 aa5.88□□□□□ -1.47
GCN20YFR009W RRP5Q05022 1729 aaKnown RBP5.87□□□□□ -1.47
GCN20YFR009W SRT1Q03175 343 aa5.87□□□□□ -1.47
GCN20YFR009W PCT1P13259 424 aa5.87□□□□□ -1.47
GCN20YFR009W AOS1Q06624 347 aa5.87□□□□□ -1.47
GCN20YFR009W VPS24P36095 224 aaKnown RBP5.86□□□□□ -1.47
GCN20YFR009W FKS3Q04952 1785 aa5.85□□□□□ -1.47
GCN20YFR009W LYS2P07702 1392 aa5.85□□□□□ -1.47
GCN20YFR009W RPS19AP07280 144 aaKnown RBP5.85□□□□□ -1.47
GCN20YFR009W RPS19BP07281 144 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms