RNA–Protein interactions for RNA: YFL007W

BLM10, Transcript of Proteasome activator, yeastyeast

Gene BLM10, Length 6,432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLM10YFL007W JIP3O13555 125 aa5.43□□□□□ -1.54
BLM10YFL007W THR4P16120 514 aaKnown RBP5.43□□□□□ -1.54
BLM10YFL007W ETP1P38748 585 aaKnown RBP5.42□□□□□ -1.54
BLM10YFL007W HEM3P28789 327 aa5.42□□□□□ -1.54
BLM10YFL007W FAF1P40546 346 aaPredicted RBP5.42□□□□□ -1.54
BLM10YFL007W VPS30Q02948 557 aa5.42□□□□□ -1.54
BLM10YFL007W CLF1Q12309 687 aaPredicted RBP5.42□□□□□ -1.54
BLM10YFL007W BLI1P35727 113 aa5.42□□□□□ -1.54
BLM10YFL007W NNF1P47149 201 aa5.42□□□□□ -1.54
BLM10YFL007W RPB2P08518 1224 aaKnown RBP5.42□□□□□ -1.54
BLM10YFL007W YJL049WP47048 450 aa5.42□□□□□ -1.54
BLM10YFL007W SKI3P17883 1432 aaKnown RBP5.41□□□□□ -1.54
BLM10YFL007W SET2P46995 733 aaKnown RBP5.41□□□□□ -1.54
BLM10YFL007W POL4P25615 582 aa5.41□□□□□ -1.54
BLM10YFL007W UTP18P40362 594 aaPredicted RBP5.41□□□□□ -1.54
BLM10YFL007W RIA1P53893 1110 aa5.41□□□□□ -1.54
BLM10YFL007W RPN7Q06103 429 aaKnown RBP5.41□□□□□ -1.54
BLM10YFL007W LSG1P53145 640 aaKnown RBP5.41□□□□□ -1.54
BLM10YFL007W CDC3P32457 520 aaKnown RBP5.4□□□□□ -1.54
BLM10YFL007W YLL054CQ12244 843 aa5.4□□□□□ -1.54
BLM10YFL007W SSA4P22202 642 aaKnown RBP5.4□□□□□ -1.54
BLM10YFL007W SPT16P32558 1035 aaKnown RBP5.4□□□□□ -1.54
BLM10YFL007W TFB3Q03290 321 aa5.4□□□□□ -1.55
BLM10YFL007W AIM7Q12156 149 aa5.4□□□□□ -1.55
BLM10YFL007W EXO84P38261 753 aa5.4□□□□□ -1.55
BLM10YFL007W SMC2P38989 1170 aaKnown RBP5.4□□□□□ -1.55
BLM10YFL007W PAP2P53632 584 aaKnown RBP5.4□□□□□ -1.55
BLM10YFL007W ERB1Q04660 807 aaKnown RBP5.39□□□□□ -1.55
BLM10YFL007W TAF13P11747 167 aa5.39□□□□□ -1.55
BLM10YFL007W TY4A-HQ6Q5P6 413 aa5.39□□□□□ -1.55
BLM10YFL007W VPS9P54787 451 aa5.39□□□□□ -1.55
BLM10YFL007W GRX3Q03835 250 aa5.39□□□□□ -1.55
BLM10YFL007W FUN30P31380 1131 aa5.38□□□□□ -1.55
BLM10YFL007W BRR1Q99177 341 aaPredicted RBP5.38□□□□□ -1.55
BLM10YFL007W NDC80P40460 691 aa5.38□□□□□ -1.55
BLM10YFL007W TRZ1P36159 838 aaPredicted RBP5.38□□□□□ -1.55
BLM10YFL007W STM1P39015 273 aaKnown RBP5.38□□□□□ -1.55
BLM10YFL007W MRPL40P36534 297 aa5.38□□□□□ -1.55
BLM10YFL007W CIR2Q08822 631 aa5.38□□□□□ -1.55
BLM10YFL007W XRN1P22147 1528 aaKnown RBP5.38□□□□□ -1.55
BLM10YFL007W SSF1P38789 453 aaPredicted RBP5.37□□□□□ -1.55
BLM10YFL007W SEC9P40357 651 aa5.37□□□□□ -1.55
BLM10YFL007W YBL028CP38202 106 aa5.37□□□□□ -1.55
BLM10YFL007W OCA5P38738 679 aa5.37□□□□□ -1.55
BLM10YFL007W TPO2P53283 614 aa5.37□□□□□ -1.55
BLM10YFL007W RRP15Q06511 250 aaPredicted RBP5.37□□□□□ -1.55
BLM10YFL007W SLK19Q08581 821 aaKnown RBP5.37□□□□□ -1.55
BLM10YFL007W HSL1P34244 1518 aa5.37□□□□□ -1.55
BLM10YFL007W MTW1P39731 289 aa5.37□□□□□ -1.55
BLM10YFL007W RNT1Q02555 471 aa5.37□□□□□ -1.55
BLM10YFL007W SPC19Q03954 165 aa5.37□□□□□ -1.55
BLM10YFL007W RTF1P53064 558 aa5.37□□□□□ -1.55
BLM10YFL007W MAK21Q12176 1025 aaKnown RBP5.37□□□□□ -1.55
BLM10YFL007W LSP1Q12230 341 aaKnown RBP5.37□□□□□ -1.55
BLM10YFL007W TPM1P17536 199 aaKnown RBP5.36□□□□□ -1.55
BLM10YFL007W SEG2P34250 1132 aa5.36□□□□□ -1.55
BLM10YFL007W PAF1P38351 445 aa5.36□□□□□ -1.55
BLM10YFL007W YNR021WP53723 404 aaKnown RBP5.36□□□□□ -1.55
BLM10YFL007W UBP10P53874 792 aaPredicted RBP5.36□□□□□ -1.55
BLM10YFL007W RRP9Q06506 573 aaKnown RBP5.36□□□□□ -1.55
BLM10YFL007W KEL3Q08979 651 aaPredicted RBP5.36□□□□□ -1.55
BLM10YFL007W KRR1P25586 316 aaPredicted RBP5.36□□□□□ -1.55
BLM10YFL007W RUD3Q12234 484 aaKnown RBP5.36□□□□□ -1.55
BLM10YFL007W MGA2P40578 1113 aa5.36□□□□□ -1.55
BLM10YFL007W MUM2P38236 366 aa5.36□□□□□ -1.55
BLM10YFL007W TOM71P38825 639 aaKnown RBP5.36□□□□□ -1.55
BLM10YFL007W TFG1P41895 735 aaPredicted RBP5.35□□□□□ -1.55
BLM10YFL007W PDI1P17967 522 aaKnown RBP5.35□□□□□ -1.55
BLM10YFL007W GCN20P43535 752 aaKnown RBP5.35□□□□□ -1.55
BLM10YFL007W MGR3Q04472 501 aa5.35□□□□□ -1.55
BLM10YFL007W YML020WQ03722 664 aa5.35□□□□□ -1.55
BLM10YFL007W MRC1P25588 1096 aa5.35□□□□□ -1.55
BLM10YFL007W DPS1P04802 557 aaKnown RBP5.35□□□□□ -1.55
BLM10YFL007W SSP1P38871 571 aa5.34□□□□□ -1.55
BLM10YFL007W NSR1P27476 414 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
BLM10YFL007W RSC8P43609 557 aaKnown RBP5.34□□□□□ -1.55
BLM10YFL007W ACE2P21192 770 aa5.34□□□□□ -1.55
BLM10YFL007W RRP1P35178 278 aaPredicted RBP5.34□□□□□ -1.55
BLM10YFL007W SHE10P53075 577 aa5.34□□□□□ -1.55
BLM10YFL007W PAM1P37304 830 aaKnown RBP5.34□□□□□ -1.55
BLM10YFL007W CLB1P24868 471 aa5.34□□□□□ -1.56
BLM10YFL007W NIP100P33420 868 aa5.34□□□□□ -1.56
BLM10YFL007W BNI5P53890 448 aaKnown RBP5.34□□□□□ -1.56
BLM10YFL007W TOM70P07213 617 aaKnown RBP5.33□□□□□ -1.56
BLM10YFL007W YKL050CP35736 922 aa5.33□□□□□ -1.56
BLM10YFL007W LAM5P43560 674 aa5.33□□□□□ -1.56
BLM10YFL007W SXM1Q04175 944 aaKnown RBP5.33□□□□□ -1.56
BLM10YFL007W CFT2Q12102 859 aaPredicted RBP5.33□□□□□ -1.56
BLM10YFL007W KIP3P53086 805 aaKnown RBP5.33□□□□□ -1.56
BLM10YFL007W HSP42Q12329 375 aa5.33□□□□□ -1.56
BLM10YFL007W RRI2Q12348 645 aa5.33□□□□□ -1.56
BLM10YFL007W YDR341CQ05506 607 aaKnown RBP5.33□□□□□ -1.56
BLM10YFL007W YPR097WQ06839 1073 aa5.33□□□□□ -1.56
BLM10YFL007W VPS24P36095 224 aaKnown RBP5.33□□□□□ -1.56
BLM10YFL007W TPM2P40414 161 aa5.33□□□□□ -1.56
BLM10YFL007W MON2P48563 1636 aaPredicted RBP5.33□□□□□ -1.56
BLM10YFL007W MRP8P35719 219 aa5.32□□□□□ -1.56
BLM10YFL007W HSE1P38753 452 aa5.32□□□□□ -1.56
BLM10YFL007W YMR111CQ04461 462 aaPredicted RBP5.32□□□□□ -1.56
BLM10YFL007W JIP5Q06214 492 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms