RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W TRK1P12685 1235 aa4.73□□□□□ -1.65
CHD1YER164W ABP1P15891 592 aaKnown RBP4.73□□□□□ -1.65
CHD1YER164W RCM1P53972 490 aa4.73□□□□□ -1.65
CHD1YER164W YFR016CP43597 1233 aaKnown RBP4.72□□□□□ -1.65
CHD1YER164W RIA1P53893 1110 aa4.71□□□□□ -1.65
CHD1YER164W PPH3P32345 308 aa4.71□□□□□ -1.66
CHD1YER164W TY3B-IQ7LHG5 1498 aaKnown RBP4.71□□□□□ -1.66
CHD1YER164W YEF3P16521 1044 aaKnown RBP4.7□□□□□ -1.66
CHD1YER164W CFT1Q06632 1357 aaKnown RBP4.69□□□□□ -1.66
CHD1YER164W MRX12P47084 519 aa4.68□□□□□ -1.66
CHD1YER164W YML133CQ03099 1374 aa4.67□□□□□ -1.66
CHD1YER164W YLL067CQ07888 1374 aa4.67□□□□□ -1.66
CHD1YER164W YLL066CQ99208 1374 aa4.67□□□□□ -1.66
CHD1YER164W MLP1Q02455 1875 aaKnown RBP4.67□□□□□ -1.66
CHD1YER164W CLC1P17891 233 aa4.67□□□□□ -1.66
CHD1YER164W URN1Q06525 465 aaKnown RBP4.67□□□□□ -1.66
CHD1YER164W BCK1Q01389 1478 aa4.67□□□□□ -1.66
CHD1YER164W FKH1P40466 484 aa4.66□□□□□ -1.66
CHD1YER164W RRP46P53256 223 aaPredicted RBP4.66□□□□□ -1.66
CHD1YER164W MPP10P47083 593 aaKnown RBP4.66□□□□□ -1.66
CHD1YER164W HIM1Q06674 414 aa4.66□□□□□ -1.66
CHD1YER164W MAK10Q02197 733 aa4.65□□□□□ -1.66
CHD1YER164W RPC31P17890 251 aa4.64□□□□□ -1.67
CHD1YER164W YDL144CQ07589 356 aa4.64□□□□□ -1.67
CHD1YER164W GAS4Q08271 471 aa4.64□□□□□ -1.67
CHD1YER164W YPR148CQ06523 435 aa4.63□□□□□ -1.67
CHD1YER164W RVB2Q12464 471 aaKnown RBP4.63□□□□□ -1.67
CHD1YER164W RPS24AP0CX31 135 aaKnown RBP4.62□□□□□ -1.67
CHD1YER164W RPS24BP0CX32 135 aaKnown RBP4.62□□□□□ -1.67
CHD1YER164W PAP2P53632 584 aaKnown RBP4.62□□□□□ -1.67
CHD1YER164W YNR029CP53729 429 aaKnown RBP4.62□□□□□ -1.67
CHD1YER164W COG8Q04632 607 aa4.62□□□□□ -1.67
CHD1YER164W CPS1P27614 576 aa4.61□□□□□ -1.67
CHD1YER164W DNF3Q12674 1656 aa4.61□□□□□ -1.67
CHD1YER164W SUI2P20459 304 aaKnown RBP4.61□□□□□ -1.67
CHD1YER164W ESC2Q06340 456 aa4.61□□□□□ -1.67
CHD1YER164W CSE4P36012 229 aa4.6□□□□□ -1.67
CHD1YER164W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.6□□□□□ -1.67not detected
CHD1YER164W KAR2P16474 682 aaKnown RBP4.59□□□□□ -1.67
CHD1YER164W THI12P42883 340 aa4.59□□□□□ -1.67
CHD1YER164W THI5P43534 340 aa4.59□□□□□ -1.67
CHD1YER164W THI11P47183 340 aa4.59□□□□□ -1.67
CHD1YER164W YRB30P53107 440 aaPredicted RBP4.59□□□□□ -1.67
CHD1YER164W THI13Q07748 340 aa4.59□□□□□ -1.67
CHD1YER164W RTR1P40084 226 aaPredicted RBP4.59□□□□□ -1.67
CHD1YER164W LEU2P04173 364 aaPredicted RBP4.59□□□□□ -1.68
CHD1YER164W USO1P25386 1790 aa4.58□□□□□ -1.68
CHD1YER164W TCB2P48231 1178 aa4.58□□□□□ -1.68
CHD1YER164W AUS1Q08409 1394 aa4.58□□□□□ -1.68
CHD1YER164W NAP1P25293 417 aaKnown RBP4.58□□□□□ -1.68
CHD1YER164W TPD3P31383 635 aa4.58□□□□□ -1.68
CHD1YER164W RIX1P38883 763 aaPredicted RBP4.58□□□□□ -1.68
CHD1YER164W THI22Q06490 572 aa4.58□□□□□ -1.68
CHD1YER164W DPS1P04802 557 aaKnown RBP4.57□□□□□ -1.68
CHD1YER164W DAL5P15365 543 aa4.57□□□□□ -1.68
CHD1YER164W RTT109Q07794 436 aa4.57□□□□□ -1.68
CHD1YER164W YBR287WP38355 427 aa4.57□□□□□ -1.68
CHD1YER164W SAP155P43612 1002 aa4.57□□□□□ -1.68
CHD1YER164W VPS27P40343 622 aaKnown RBP4.56□□□□□ -1.68
CHD1YER164W IOC4Q04213 475 aa4.56□□□□□ -1.68
CHD1YER164W PRD1P25375 712 aa4.56□□□□□ -1.68
CHD1YER164W SIS2P36024 562 aa4.55□□□□□ -1.68
CHD1YER164W DIP2Q12220 943 aaPredicted RBP4.55□□□□□ -1.68
CHD1YER164W PDI1P17967 522 aaKnown RBP4.55□□□□□ -1.68
CHD1YER164W NOP58Q12499 511 aaKnown RBP4.55□□□□□ -1.68
CHD1YER164W PSK1P31374 1356 aa4.54□□□□□ -1.68
CHD1YER164W CDC45Q08032 650 aa4.54□□□□□ -1.68
CHD1YER164W MTR4P47047 1073 aaKnown RBP4.53□□□□□ -1.68
CHD1YER164W PRP45P28004 379 aaPredicted RBP4.53□□□□□ -1.68
CHD1YER164W HEF3P53978 1044 aaKnown RBP4.53□□□□□ -1.68
CHD1YER164W ASF1P32447 279 aa4.53□□□□□ -1.68
CHD1YER164W MSB3P48566 633 aaPredicted RBP4.53□□□□□ -1.68
CHD1YER164W ILV3P39522 585 aaKnown RBP4.52□□□□□ -1.69
CHD1YER164W RAD2P07276 1031 aa4.52□□□□□ -1.69
CHD1YER164W TAP42Q04372 366 aa4.52□□□□□ -1.69
CHD1YER164W YGR122WP53272 402 aa4.52□□□□□ -1.69
CHD1YER164W HAP1P0CE41 1502 aa4.51□□□□□ -1.69
CHD1YER164W VPS24P36095 224 aaKnown RBP4.51□□□□□ -1.69
CHD1YER164W AKL1P38080 1108 aaKnown RBP4.51□□□□□ -1.69
CHD1YER164W FPR4Q06205 392 aaPredicted RBP4.51□□□□□ -1.69
CHD1YER164W HSP104P31539 908 aaKnown RBP4.51□□□□□ -1.69
CHD1YER164W RTF1P53064 558 aa4.51□□□□□ -1.69
CHD1YER164W RRT14P40470 206 aa4.5□□□□□ -1.69
CHD1YER164W YIL092WP40497 633 aa4.5□□□□□ -1.69
CHD1YER164W ADE6P38972 1358 aaKnown RBP4.5□□□□□ -1.69
CHD1YER164W TOM1Q03280 3268 aa4.5□□□□□ -1.69
CHD1YER164W PUF6Q04373 656 aaKnown RBP4.49□□□□□ -1.69
CHD1YER164W YIL177CP40434 1758 aa4.49□□□□□ -1.69
CHD1YER164W YJL225CP40889 1758 aa4.49□□□□□ -1.69
CHD1YER164W POL32P47110 350 aa4.49□□□□□ -1.69
CHD1YER164W DSD1P53095 428 aa4.49□□□□□ -1.69
CHD1YER164W SNF2P22082 1703 aa4.49□□□□□ -1.69
CHD1YER164W TPM2P40414 161 aa4.49□□□□□ -1.69
CHD1YER164W PRP5P21372 849 aaPredicted RBP4.48□□□□□ -1.69
CHD1YER164W APP1P53933 587 aa4.48□□□□□ -1.69
CHD1YER164W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
CHD1YER164W APC1P53886 1748 aa4.48□□□□□ -1.69
CHD1YER164W GRX4P32642 244 aa4.48□□□□□ -1.69
CHD1YER164W DEF1P35732 738 aaKnown RBP4.48□□□□□ -1.69
CHD1YER164W RPS0BP46654 252 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms