RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C FUN12P39730 1002 aaKnown RBP15.3■□□□□ 0.04
SCC4YER147C TRK1P12685 1235 aa15.29■□□□□ 0.04
SCC4YER147C YEF3P16521 1044 aaKnown RBP15.29■□□□□ 0.04
SCC4YER147C YDL144CQ07589 356 aa15.29■□□□□ 0.04
SCC4YER147C RVB2Q12464 471 aaKnown RBP15.29■□□□□ 0.04
SCC4YER147C YML133CQ03099 1374 aa15.25■□□□□ 0.03
SCC4YER147C YLL067CQ07888 1374 aa15.25■□□□□ 0.03
SCC4YER147C YLL066CQ99208 1374 aa15.25■□□□□ 0.03
SCC4YER147C MRX12P47084 519 aa15.2■□□□□ 0.02
SCC4YER147C YRB30P53107 440 aaPredicted RBP15.2■□□□□ 0.02
SCC4YER147C SNF2P22082 1703 aa15.19■□□□□ 0.02
SCC4YER147C KRE5P22023 1365 aa15.18■□□□□ 0.02
SCC4YER147C SUI2P20459 304 aaKnown RBP15.18■□□□□ 0.02
SCC4YER147C FPR3P38911 411 aaKnown RBP15.16■□□□□ 0.02
SCC4YER147C MPP10P47083 593 aaKnown RBP15.16■□□□□ 0.02
SCC4YER147C PSK1P31374 1356 aa15.15■□□□□ 0.02
SCC4YER147C RCM1P53972 490 aa15.14■□□□□ 0.01
SCC4YER147C RPC31P17890 251 aa15.11■□□□□ 0.01
SCC4YER147C RTR1P40084 226 aaPredicted RBP15.11■□□□□ 0.01
SCC4YER147C RRP46P53256 223 aaPredicted RBP15.11■□□□□ 0.01
SCC4YER147C RIA1P53893 1110 aa15.11■□□□□ 0.01
SCC4YER147C DNF3Q12674 1656 aa15.1■□□□□ 0.01
SCC4YER147C KAR2P16474 682 aaKnown RBP15.1■□□□□ 0.01
SCC4YER147C PPH3P32345 308 aa15.1■□□□□ 0.01
SCC4YER147C NAB6Q03735 1134 aaKnown RBP RIP-Chip data15.08■□□□□ 0not detected
SCC4YER147C TAP42Q04372 366 aa15.08■□□□□ 0
SCC4YER147C PDI1P17967 522 aaKnown RBP15.05■□□□□ -0
SCC4YER147C SAP155P43612 1002 aa15.03■□□□□ -0
SCC4YER147C LEU2P04173 364 aaPredicted RBP15.03■□□□□ -0
SCC4YER147C CPS1P27614 576 aa15□□□□□ -0.01
SCC4YER147C HIM1Q06674 414 aa15□□□□□ -0.01
SCC4YER147C PRD1P25375 712 aa14.99□□□□□ -0.01
SCC4YER147C PAP2P53632 584 aaKnown RBP14.99□□□□□ -0.01
SCC4YER147C AUS1Q08409 1394 aa14.98□□□□□ -0.01
SCC4YER147C GRX4P32642 244 aa14.98□□□□□ -0.01
SCC4YER147C MTR4P47047 1073 aaKnown RBP14.98□□□□□ -0.01
SCC4YER147C THI22Q06490 572 aa14.98□□□□□ -0.01
SCC4YER147C RAD2P07276 1031 aa14.97□□□□□ -0.01
SCC4YER147C TPD3P31383 635 aa14.97□□□□□ -0.01
SCC4YER147C RTF1P53064 558 aa14.97□□□□□ -0.01
SCC4YER147C MAK10Q02197 733 aa14.97□□□□□ -0.01
SCC4YER147C YNR029CP53729 429 aaKnown RBP14.95□□□□□ -0.02
SCC4YER147C HEF3P53978 1044 aaKnown RBP14.93□□□□□ -0.02
SCC4YER147C USO1P25386 1790 aa14.91□□□□□ -0.02
SCC4YER147C IME2P32581 645 aa14.91□□□□□ -0.02
SCC4YER147C YIL092WP40497 633 aa14.91□□□□□ -0.02
SCC4YER147C BUD27P43573 796 aaKnown RBP RIP-Chip data14.91□□□□□ -0.02not detected
SCC4YER147C ABP1P15891 592 aaKnown RBP14.9□□□□□ -0.02
SCC4YER147C OPY1P38271 328 aa14.9□□□□□ -0.02
SCC4YER147C DAL5P15365 543 aa14.89□□□□□ -0.03
SCC4YER147C SIR4P11978 1358 aa14.87□□□□□ -0.03
SCC4YER147C CSE4P36012 229 aa14.87□□□□□ -0.03
SCC4YER147C RTT109Q07794 436 aa14.87□□□□□ -0.03
SCC4YER147C RPO41P13433 1351 aaKnown RBP14.86□□□□□ -0.03
SCC4YER147C YFR016CP43597 1233 aaKnown RBP14.85□□□□□ -0.03
SCC4YER147C RPS24AP0CX31 135 aaKnown RBP14.84□□□□□ -0.03
SCC4YER147C RPS24BP0CX32 135 aaKnown RBP14.84□□□□□ -0.03
SCC4YER147C PRP43P53131 767 aaKnown RBP14.84□□□□□ -0.03
SCC4YER147C GAS4Q08271 471 aa14.84□□□□□ -0.03
SCC4YER147C MAK21Q12176 1025 aaKnown RBP14.84□□□□□ -0.03
SCC4YER147C YIR014WP40570 242 aa14.83□□□□□ -0.04
SCC4YER147C POL32P47110 350 aa14.83□□□□□ -0.04
SCC4YER147C ADE6P38972 1358 aaKnown RBP14.83□□□□□ -0.04
SCC4YER147C TY1B-NL2Q99337 1749 aaKnown RBP14.82□□□□□ -0.04
SCC4YER147C YRF1-4O13559 1382 aa14.79□□□□□ -0.04
SCC4YER147C DPS1P04802 557 aaKnown RBP14.78□□□□□ -0.04
SCC4YER147C AKL1P38080 1108 aaKnown RBP14.76□□□□□ -0.05
SCC4YER147C BUB1P41695 1021 aaKnown RBP RIP-Chip data14.76□□□□□ -0.05not detected
SCC4YER147C EAF7P53911 425 aaKnown RBP14.75□□□□□ -0.05
SCC4YER147C PUF6Q04373 656 aaKnown RBP14.74□□□□□ -0.05
SCC4YER147C APC1P53886 1748 aa14.74□□□□□ -0.05
SCC4YER147C DSD1P53095 428 aa14.71□□□□□ -0.05
SCC4YER147C CLC1P17891 233 aa14.69□□□□□ -0.06
SCC4YER147C YNL050CP53952 270 aa14.69□□□□□ -0.06
SCC4YER147C GYP7P48365 746 aa14.69□□□□□ -0.06
SCC4YER147C RRT14P40470 206 aa14.66□□□□□ -0.06
SCC4YER147C TRP5P00931 707 aaKnown RBP14.65□□□□□ -0.06
SCC4YER147C ZDS1P50111 915 aaKnown RBP14.65□□□□□ -0.06
SCC4YER147C TY4B-HP0C2J7 1802 aa14.65□□□□□ -0.06
SCC4YER147C TY4B-JP47024 1803 aa14.65□□□□□ -0.06
SCC4YER147C MAM1P40065 302 aa14.65□□□□□ -0.06
SCC4YER147C YRF1-2P40105 1681 aa14.64□□□□□ -0.07
SCC4YER147C NTH2P35172 780 aa14.63□□□□□ -0.07
SCC4YER147C YMR196WQ04336 1088 aa14.63□□□□□ -0.07
SCC4YER147C PCT1P13259 424 aa14.61□□□□□ -0.07
SCC4YER147C SRT1Q03175 343 aa14.61□□□□□ -0.07
SCC4YER147C RRP5Q05022 1729 aaKnown RBP14.61□□□□□ -0.07
SCC4YER147C SNF7P39929 240 aaKnown RBP14.6□□□□□ -0.07
SCC4YER147C YIL177CP40434 1758 aa14.59□□□□□ -0.07
SCC4YER147C YJL225CP40889 1758 aa14.59□□□□□ -0.07
SCC4YER147C EDE1P34216 1381 aa14.58□□□□□ -0.07
SCC4YER147C ECM16Q04217 1267 aaKnown RBP14.58□□□□□ -0.08
SCC4YER147C HSP104P31539 908 aaKnown RBP14.57□□□□□ -0.08
SCC4YER147C YBR287WP38355 427 aa14.56□□□□□ -0.08
SCC4YER147C YPP1P46951 817 aa14.55□□□□□ -0.08
SCC4YER147C YPR148CQ06523 435 aa14.55□□□□□ -0.08
SCC4YER147C ILV3P39522 585 aaKnown RBP14.55□□□□□ -0.08
SCC4YER147C AOS1Q06624 347 aa14.55□□□□□ -0.08
SCC4YER147C BMS1Q08965 1183 aaKnown RBP14.55□□□□□ -0.08
SCC4YER147C CSI1Q04368 295 aa14.54□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms