RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeastyeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRB1YEL060C SPE2P21182 396 aa8.91□□□□□ -0.98
PRB1YEL060C DOP1Q03921 1698 aa8.9□□□□□ -0.98
PRB1YEL060C VPS24P36095 224 aaKnown RBP8.9□□□□□ -0.98
PRB1YEL060C TRK1P12685 1235 aa8.9□□□□□ -0.99
PRB1YEL060C BNR1P40450 1375 aa8.89□□□□□ -0.99
PRB1YEL060C MPP10P47083 593 aaKnown RBP8.89□□□□□ -0.99
PRB1YEL060C RAD2P07276 1031 aa8.88□□□□□ -0.99
PRB1YEL060C MSP1P28737 362 aa8.88□□□□□ -0.99
PRB1YEL060C YEF3P16521 1044 aaKnown RBP8.87□□□□□ -0.99
PRB1YEL060C EDE1P34216 1381 aa8.86□□□□□ -0.99
PRB1YEL060C VMR1P38735 1592 aa8.86□□□□□ -0.99
PRB1YEL060C NOT3P06102 836 aaKnown RBP8.85□□□□□ -0.99
PRB1YEL060C AVT3P36062 692 aa8.85□□□□□ -0.99
PRB1YEL060C FKH1P40466 484 aa8.85□□□□□ -0.99
PRB1YEL060C NUP192P47054 1683 aa8.84□□□□□ -0.99
PRB1YEL060C AIM44Q99299 758 aa8.84□□□□□ -0.99
PRB1YEL060C MLP1Q02455 1875 aaKnown RBP8.84□□□□□ -0.99
PRB1YEL060C SNF2P22082 1703 aa8.83□□□□□ -1
PRB1YEL060C ARL1P38116 183 aaKnown RBP8.83□□□□□ -1
PRB1YEL060C QCR6P00127 147 aa8.82□□□□□ -1
PRB1YEL060C CTR9P89105 1077 aa8.82□□□□□ -1
PRB1YEL060C LSP1Q12230 341 aaKnown RBP8.82□□□□□ -1
PRB1YEL060C CHZ1P40019 153 aaPredicted RBP8.82□□□□□ -1
PRB1YEL060C SAP155P43612 1002 aa8.82□□□□□ -1
PRB1YEL060C KNS1P32350 737 aaPredicted RBP8.81□□□□□ -1
PRB1YEL060C YIL092WP40497 633 aa8.81□□□□□ -1
PRB1YEL060C BUD27P43573 796 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
PRB1YEL060C IML1P47170 1584 aa8.8□□□□□ -1
PRB1YEL060C DAL5P15365 543 aa8.8□□□□□ -1
PRB1YEL060C POL32P47110 350 aa8.8□□□□□ -1
PRB1YEL060C SEC7P11075 2009 aaKnown RBP8.8□□□□□ -1
PRB1YEL060C TRM3Q07527 1436 aa8.79□□□□□ -1
PRB1YEL060C YAP3P38749 330 aa8.79□□□□□ -1
PRB1YEL060C RTR1P40084 226 aaPredicted RBP8.79□□□□□ -1
PRB1YEL060C HAP1P0CE41 1502 aa8.79□□□□□ -1
PRB1YEL060C YRF1-1P0CX20 1796 aa8.78□□□□□ -1
PRB1YEL060C YRF1-5P0CX21 1796 aa8.78□□□□□ -1
PRB1YEL060C YRF1-8P0CX22 1796 aa8.78□□□□□ -1
PRB1YEL060C RRP46P53256 223 aaPredicted RBP8.78□□□□□ -1
PRB1YEL060C TEA1P47988 759 aa8.78□□□□□ -1
PRB1YEL060C RLF2Q12495 606 aa8.78□□□□□ -1
PRB1YEL060C TPD3P31383 635 aa8.76□□□□□ -1.01
PRB1YEL060C YPP1P46951 817 aa8.76□□□□□ -1.01
PRB1YEL060C TAF8Q03750 510 aa8.76□□□□□ -1.01
PRB1YEL060C NOP58Q12499 511 aaKnown RBP8.76□□□□□ -1.01
PRB1YEL060C KRE5P22023 1365 aa8.76□□□□□ -1.01
PRB1YEL060C RPS0BP46654 252 aaKnown RBP8.74□□□□□ -1.01
PRB1YEL060C ITC1P53125 1264 aa8.74□□□□□ -1.01
PRB1YEL060C PUF6Q04373 656 aaKnown RBP8.73□□□□□ -1.01
PRB1YEL060C THI22Q06490 572 aa8.73□□□□□ -1.01
PRB1YEL060C NUP188P52593 1655 aaKnown RBP8.72□□□□□ -1.01
PRB1YEL060C PRD1P25375 712 aa8.72□□□□□ -1.01
PRB1YEL060C HEF3P53978 1044 aaKnown RBP8.72□□□□□ -1.01
PRB1YEL060C MET5P47169 1442 aa8.71□□□□□ -1.01
PRB1YEL060C YML133CQ03099 1374 aa8.7□□□□□ -1.02
PRB1YEL060C YLL067CQ07888 1374 aa8.7□□□□□ -1.02
PRB1YEL060C YLL066CQ99208 1374 aa8.7□□□□□ -1.02
PRB1YEL060C CSE4P36012 229 aa8.7□□□□□ -1.02
PRB1YEL060C MAK21Q12176 1025 aaKnown RBP8.7□□□□□ -1.02
PRB1YEL060C YRF1-4O13559 1382 aa8.69□□□□□ -1.02
PRB1YEL060C MTC1P47018 478 aaKnown RBP8.69□□□□□ -1.02
PRB1YEL060C SIR4P11978 1358 aa8.68□□□□□ -1.02
PRB1YEL060C SRS2P12954 1174 aa8.68□□□□□ -1.02
PRB1YEL060C ALD4P46367 519 aaKnown RBP8.68□□□□□ -1.02
PRB1YEL060C HAP5Q02516 242 aa8.68□□□□□ -1.02
PRB1YEL060C LCD1Q04377 747 aa8.68□□□□□ -1.02
PRB1YEL060C COG8Q04632 607 aa8.68□□□□□ -1.02
PRB1YEL060C DIP2Q12220 943 aaPredicted RBP8.68□□□□□ -1.02
PRB1YEL060C KAR2P16474 682 aaKnown RBP8.67□□□□□ -1.02
PRB1YEL060C YGR130CP53278 816 aa8.67□□□□□ -1.02
PRB1YEL060C BCK1Q01389 1478 aa8.67□□□□□ -1.02
PRB1YEL060C RAD9P14737 1309 aa8.67□□□□□ -1.02
PRB1YEL060C RSC1P53236 928 aa8.66□□□□□ -1.02
PRB1YEL060C PIL1P53252 339 aaKnown RBP8.66□□□□□ -1.02
PRB1YEL060C RTT109Q07794 436 aa8.66□□□□□ -1.02
PRB1YEL060C KRI1P42846 591 aaKnown RBP8.65□□□□□ -1.02
PRB1YEL060C ECM16Q04217 1267 aaKnown RBP8.64□□□□□ -1.03
PRB1YEL060C PAP2P53632 584 aaKnown RBP8.62□□□□□ -1.03
PRB1YEL060C NUP145P49687 1317 aa8.62□□□□□ -1.03
PRB1YEL060C DNF3Q12674 1656 aa8.62□□□□□ -1.03
PRB1YEL060C RKM3P38222 552 aa8.62□□□□□ -1.03
PRB1YEL060C RRT14P40470 206 aa8.62□□□□□ -1.03
PRB1YEL060C MDG1P53885 366 aa8.62□□□□□ -1.03
PRB1YEL060C TRP5P00931 707 aaKnown RBP8.61□□□□□ -1.03
PRB1YEL060C TYS1P36421 394 aaKnown RBP8.61□□□□□ -1.03
PRB1YEL060C TPM2P40414 161 aa8.61□□□□□ -1.03
PRB1YEL060C ESC2Q06340 456 aa8.61□□□□□ -1.03
PRB1YEL060C DLD1P32891 587 aa8.6□□□□□ -1.03
PRB1YEL060C TAP42Q04372 366 aa8.6□□□□□ -1.03
PRB1YEL060C CAB1Q04430 367 aa8.6□□□□□ -1.03
PRB1YEL060C RAD50P12753 1312 aa8.59□□□□□ -1.03
PRB1YEL060C MCM2P29469 868 aa8.59□□□□□ -1.03
PRB1YEL060C BDH2P39713 417 aa8.59□□□□□ -1.03
PRB1YEL060C ROM2P51862 1356 aaKnown RBP8.59□□□□□ -1.03
PRB1YEL060C CIR1P42940 261 aa8.58□□□□□ -1.04
PRB1YEL060C NKP2Q06162 153 aa8.58□□□□□ -1.04
PRB1YEL060C HIM1Q06674 414 aa8.58□□□□□ -1.04
PRB1YEL060C RPN1P38764 993 aaKnown RBP8.58□□□□□ -1.04
PRB1YEL060C RPN12P32496 274 aa8.57□□□□□ -1.04
PRB1YEL060C IPL1P38991 367 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms