RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	NUP188	P52593	1655 aa	Known RBP	5.81	□□□□□ -1.48
PDR15	YDR406W	PDR11	P40550	1411 aa		5.81	□□□□□ -1.48
PDR15	YDR406W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.79	□□□□□ -1.48
PDR15	YDR406W	RAD9	P14737	1309 aa		5.79	□□□□□ -1.48
PDR15	YDR406W	RTF1	P53064	558 aa		5.79	□□□□□ -1.48
PDR15	YDR406W	RTG3	P38165	486 aa		5.78	□□□□□ -1.48
PDR15	YDR406W	SIS2	P36024	562 aa		5.77	□□□□□ -1.49
PDR15	YDR406W	YFR016C	P43597	1233 aa	Known RBP	5.77	□□□□□ -1.49
PDR15	YDR406W	KAR2	P16474	682 aa	Known RBP	5.76	□□□□□ -1.49
PDR15	YDR406W	MAK10	Q02197	733 aa		5.76	□□□□□ -1.49
PDR15	YDR406W	DMA2	P53924	522 aa		5.75	□□□□□ -1.49
PDR15	YDR406W	KRE5	P22023	1365 aa		5.75	□□□□□ -1.49
PDR15	YDR406W	CFT1	Q06632	1357 aa	Known RBP	5.75	□□□□□ -1.49
PDR15	YDR406W	SNU71	P53207	620 aa	Known RBP	5.75	□□□□□ -1.49
PDR15	YDR406W	PAP2	P53632	584 aa	Known RBP	5.75	□□□□□ -1.49
PDR15	YDR406W	RCM1	P53972	490 aa		5.74	□□□□□ -1.49
PDR15	YDR406W	CDC45	Q08032	650 aa		5.74	□□□□□ -1.49
PDR15	YDR406W	PRS1	P32895	427 aa	Known RBP	5.74	□□□□□ -1.49
PDR15	YDR406W	PDI1	P17967	522 aa	Known RBP	5.74	□□□□□ -1.49
PDR15	YDR406W	FKH1	P40466	484 aa		5.74	□□□□□ -1.49
PDR15	YDR406W	RPP0	P05317	312 aa	Known RBP	5.73	□□□□□ -1.49
PDR15	YDR406W	SSP1	P38871	571 aa		5.73	□□□□□ -1.49
PDR15	YDR406W	HGH1	P48362	394 aa	Known RBP	5.73	□□□□□ -1.49
PDR15	YDR406W	VPS27	P40343	622 aa	Known RBP	5.73	□□□□□ -1.49
PDR15	YDR406W	BCK1	Q01389	1478 aa		5.73	□□□□□ -1.49
PDR15	YDR406W	YDL144C	Q07589	356 aa		5.72	□□□□□ -1.49
PDR15	YDR406W	RTR1	P40084	226 aa	Predicted RBP	5.72	□□□□□ -1.49
PDR15	YDR406W	LEU2	P04173	364 aa	Predicted RBP	5.71	□□□□□ -1.49
PDR15	YDR406W	RIM101	P33400	625 aa		5.71	□□□□□ -1.49
PDR15	YDR406W	YPR148C	Q06523	435 aa		5.71	□□□□□ -1.5
PDR15	YDR406W	BNI1	P41832	1953 aa		5.7	□□□□□ -1.5
PDR15	YDR406W	CSE4	P36012	229 aa		5.7	□□□□□ -1.5
PDR15	YDR406W	MTR4	P47047	1073 aa	Known RBP	5.7	□□□□□ -1.5
PDR15	YDR406W	YNR029C	P53729	429 aa	Known RBP	5.7	□□□□□ -1.5
PDR15	YDR406W	ASF1	P32447	279 aa		5.69	□□□□□ -1.5
PDR15	YDR406W	GRX4	P32642	244 aa		5.69	□□□□□ -1.5
PDR15	YDR406W	NST1	P53935	1240 aa		5.69	□□□□□ -1.5
PDR15	YDR406W	YMR196W	Q04336	1088 aa		5.69	□□□□□ -1.5
PDR15	YDR406W	PSK1	P31374	1356 aa		5.68	□□□□□ -1.5
PDR15	YDR406W	SUP35	P05453	685 aa	Known RBP	5.67	□□□□□ -1.5
PDR15	YDR406W	RAD2	P07276	1031 aa		5.66	□□□□□ -1.5
PDR15	YDR406W	MPP10	P47083	593 aa	Known RBP	5.66	□□□□□ -1.5
PDR15	YDR406W	PPH3	P32345	308 aa		5.66	□□□□□ -1.5
PDR15	YDR406W	TRK1	P12685	1235 aa		5.65	□□□□□ -1.5
PDR15	YDR406W	FUN12	P39730	1002 aa	Known RBP	5.65	□□□□□ -1.5
PDR15	YDR406W	TAP42	Q04372	366 aa		5.65	□□□□□ -1.5
PDR15	YDR406W	CPS1	P27614	576 aa		5.65	□□□□□ -1.5
PDR15	YDR406W	YFR006W	P43590	535 aa		5.65	□□□□□ -1.5
PDR15	YDR406W	HAP1	P0CE41	1502 aa		5.65	□□□□□ -1.5
PDR15	YDR406W	DPS1	P04802	557 aa	Known RBP	5.65	□□□□□ -1.51
PDR15	YDR406W	GAS4	Q08271	471 aa		5.65	□□□□□ -1.51
PDR15	YDR406W	RVB2	Q12464	471 aa	Known RBP	5.65	□□□□□ -1.51
PDR15	YDR406W	NUP192	P47054	1683 aa		5.64	□□□□□ -1.51
PDR15	YDR406W	KRI1	P42846	591 aa	Known RBP	5.64	□□□□□ -1.51
PDR15	YDR406W	OSW7	P43611	510 aa		5.64	□□□□□ -1.51
PDR15	YDR406W	YML133C	Q03099	1374 aa		5.64	□□□□□ -1.51
PDR15	YDR406W	YLL067C	Q07888	1374 aa		5.64	□□□□□ -1.51
PDR15	YDR406W	YLL066C	Q99208	1374 aa		5.64	□□□□□ -1.51
PDR15	YDR406W	MAK21	Q12176	1025 aa	Known RBP	5.64	□□□□□ -1.51
PDR15	YDR406W	DNF3	Q12674	1656 aa		5.64	□□□□□ -1.51
PDR15	YDR406W	RPS24A	P0CX31	135 aa	Known RBP	5.64	□□□□□ -1.51
PDR15	YDR406W	RPS24B	P0CX32	135 aa	Known RBP	5.64	□□□□□ -1.51
PDR15	YDR406W	YJL181W	P46987	611 aa		5.64	□□□□□ -1.51
PDR15	YDR406W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
PDR15	YDR406W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
PDR15	YDR406W	TPD3	P31383	635 aa		5.62	□□□□□ -1.51
PDR15	YDR406W	ECM16	Q04217	1267 aa	Known RBP	5.62	□□□□□ -1.51
PDR15	YDR406W	TPM1	P17536	199 aa	Known RBP	5.62	□□□□□ -1.51
PDR15	YDR406W	EAF7	P53911	425 aa	Known RBP	5.62	□□□□□ -1.51
PDR15	YDR406W	AIM7	Q12156	149 aa		5.62	□□□□□ -1.51
PDR15	YDR406W	YML020W	Q03722	664 aa		5.62	□□□□□ -1.51
PDR15	YDR406W	YEF3	P16521	1044 aa	Known RBP	5.62	□□□□□ -1.51
PDR15	YDR406W	YNR021W	P53723	404 aa	Known RBP	5.61	□□□□□ -1.51
PDR15	YDR406W	SUB1	P54000	292 aa	Known RBP	5.61	□□□□□ -1.51
PDR15	YDR406W	SUI2	P20459	304 aa	Known RBP	5.61	□□□□□ -1.51
PDR15	YDR406W	HIM1	Q06674	414 aa		5.6	□□□□□ -1.51
PDR15	YDR406W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
PDR15	YDR406W	THI12	P42883	340 aa		5.6	□□□□□ -1.51
PDR15	YDR406W	THI5	P43534	340 aa		5.6	□□□□□ -1.51
PDR15	YDR406W	THI11	P47183	340 aa		5.6	□□□□□ -1.51
PDR15	YDR406W	THI13	Q07748	340 aa		5.6	□□□□□ -1.51
PDR15	YDR406W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
PDR15	YDR406W	RPC31	P17890	251 aa		5.59	□□□□□ -1.51
PDR15	YDR406W	SAP155	P43612	1002 aa		5.59	□□□□□ -1.51
PDR15	YDR406W	ENP2	P48234	707 aa	Known RBP	5.59	□□□□□ -1.51
PDR15	YDR406W	PRD1	P25375	712 aa		5.59	□□□□□ -1.51
PDR15	YDR406W	FAR11	P53917	953 aa		5.58	□□□□□ -1.52
PDR15	YDR406W	MLP1	Q02455	1875 aa	Known RBP	5.58	□□□□□ -1.52
PDR15	YDR406W	DAL5	P15365	543 aa		5.58	□□□□□ -1.52
PDR15	YDR406W	RPO41	P13433	1351 aa	Known RBP	5.58	□□□□□ -1.52
PDR15	YDR406W	SWE1	P32944	819 aa		5.58	□□□□□ -1.52
PDR15	YDR406W	VPS72	Q03388	795 aa		5.58	□□□□□ -1.52
PDR15	YDR406W	AKL1	P38080	1108 aa	Known RBP	5.57	□□□□□ -1.52
PDR15	YDR406W	DSF2	P38213	736 aa		5.57	□□□□□ -1.52
PDR15	YDR406W	PTP3	P40048	928 aa		5.57	□□□□□ -1.52
PDR15	YDR406W	RPS0B	P46654	252 aa	Known RBP	5.57	□□□□□ -1.52
PDR15	YDR406W	GEF1	P37020	779 aa		5.57	□□□□□ -1.52
PDR15	YDR406W	MEC3	Q02574	474 aa		5.57	□□□□□ -1.52
PDR15	YDR406W	EBP2	P36049	427 aa	Known RBP	5.57	□□□□□ -1.52
PDR15	YDR406W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.57	□□□□□ -1.52	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms