RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeast

Gene HTA1, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA1	YDR225W	GAP1	P19145	602 aa	Predicted RBP	5.06	□□□□□ -1.6
HTA1	YDR225W	SSA4	P22202	642 aa	Known RBP	5.06	□□□□□ -1.6
HTA1	YDR225W	KTR1	P27810	393 aa	Known RBP	5.06	□□□□□ -1.6
HTA1	YDR225W	ORC6	P38826	435 aa		5.06	□□□□□ -1.6
HTA1	YDR225W	TEA1	P47988	759 aa		5.05	□□□□□ -1.6
HTA1	YDR225W	YRR1	Q12172	810 aa		5.05	□□□□□ -1.6
HTA1	YDR225W	TIF1	P10081	395 aa	Known RBP	5.04	□□□□□ -1.6
HTA1	YDR225W	RPL34B	P40525	121 aa	Known RBP	5.04	□□□□□ -1.6
HTA1	YDR225W	PEX21	P50091	288 aa		5.04	□□□□□ -1.6
HTA1	YDR225W	TYW1	Q08960	810 aa	Known RBP	5.04	□□□□□ -1.6
HTA1	YDR225W	ERG12	P07277	443 aa		5.03	□□□□□ -1.6
HTA1	YDR225W	YBL036C	P38197	257 aa		5.03	□□□□□ -1.6
HTA1	YDR225W	CSC1	Q06538	782 aa		5.03	□□□□□ -1.6
HTA1	YDR225W	TUM1	Q08686	304 aa	Known RBP	5.03	□□□□□ -1.6
HTA1	YDR225W	TTI1	P36097	1038 aa		5.02	□□□□□ -1.61
HTA1	YDR225W	TFB4	Q12004	338 aa		5.02	□□□□□ -1.61
HTA1	YDR225W	DPS1	P04802	557 aa	Known RBP	5.01	□□□□□ -1.61
HTA1	YDR225W	RGR1	P19263	1082 aa		5.01	□□□□□ -1.61
HTA1	YDR225W	CPS1	P27614	576 aa		5.01	□□□□□ -1.61
HTA1	YDR225W	MVP1	P40959	511 aa	Known RBP	5.01	□□□□□ -1.61
HTA1	YDR225W	AIM44	Q99299	758 aa		5.01	□□□□□ -1.61
HTA1	YDR225W	YPR204W	Q08995	1032 aa		5	□□□□□ -1.61
HTA1	YDR225W	CLB5	P30283	435 aa		4.99	□□□□□ -1.61
HTA1	YDR225W	BIO2	P32451	375 aa		4.99	□□□□□ -1.61
HTA1	YDR225W	RTG2	P32608	588 aa	Known RBP	4.99	□□□□□ -1.61
HTA1	YDR225W	STR2	P47164	639 aa		4.99	□□□□□ -1.61
HTA1	YDR225W	GYP1	Q08484	637 aa		4.99	□□□□□ -1.61
HTA1	YDR225W	NUD1	P32336	851 aa		4.98	□□□□□ -1.61
HTA1	YDR225W	SLD2	P34252	453 aa		4.98	□□□□□ -1.61
HTA1	YDR225W	CSE4	P36012	229 aa		4.98	□□□□□ -1.61
HTA1	YDR225W	ISM1	P48526	1002 aa		4.98	□□□□□ -1.61
HTA1	YDR225W	HST2	P53686	357 aa		4.98	□□□□□ -1.61
HTA1	YDR225W	FPK1	P53739	893 aa		4.98	□□□□□ -1.61
HTA1	YDR225W	BUD20	Q08004	166 aa	Predicted RBP	4.98	□□□□□ -1.61
HTA1	YDR225W	NOB1	Q08444	459 aa	Known RBP	4.98	□□□□□ -1.61
HTA1	YDR225W	MRX12	P47084	519 aa		4.97	□□□□□ -1.61
HTA1	YDR225W	YNL108C	P53929	270 aa		4.97	□□□□□ -1.61
HTA1	YDR225W	NIS1	P53939	407 aa		4.97	□□□□□ -1.61
HTA1	YDR225W	RPL34A	P87262	121 aa	Predicted RBP	4.97	□□□□□ -1.61
HTA1	YDR225W	YPR109W	Q06104	294 aa		4.97	□□□□□ -1.61
HTA1	YDR225W	CDC3	P32457	520 aa	Known RBP	4.96	□□□□□ -1.62
HTA1	YDR225W	ORC1	P54784	914 aa	Predicted RBP	4.96	□□□□□ -1.62
HTA1	YDR225W	PKH3	Q03306	898 aa	Predicted RBP	4.96	□□□□□ -1.62
HTA1	YDR225W	RAD59	Q12223	238 aa		4.96	□□□□□ -1.62
HTA1	YDR225W	MMP1	Q12372	583 aa		4.96	□□□□□ -1.62
HTA1	YDR225W	SUP45	P12385	437 aa	Known RBP	4.95	□□□□□ -1.62
HTA1	YDR225W	SDH2	P21801	266 aa		4.95	□□□□□ -1.62
HTA1	YDR225W	ESS1	P22696	170 aa		4.95	□□□□□ -1.62
HTA1	YDR225W	YMR196W	Q04336	1088 aa		4.95	□□□□□ -1.62
HTA1	YDR225W	RAS1	P01119	309 aa		4.94	□□□□□ -1.62
HTA1	YDR225W	SCJ1	P25303	377 aa		4.94	□□□□□ -1.62
HTA1	YDR225W	PRT1	P06103	763 aa	Known RBP	4.93	□□□□□ -1.62
HTA1	YDR225W	NOP7	P53261	605 aa	Known RBP	4.93	□□□□□ -1.62
HTA1	YDR225W	SAS4	Q04003	481 aa		4.93	□□□□□ -1.62
HTA1	YDR225W	TY1A-DR4	O74302	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-H	P0C2I4	478 aa	Known RBP	4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-A	P0CX57	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-PR1	P0CX58	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-OR	P0CX59	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-PR2	P0CX60	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-DR5	P0CX65	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-ER2	P0CX66	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-GR3	P0CX67	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-LR1	P0CX68	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-MR2	P0CX69	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	SEC2	P17065	759 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	SIT4	P20604	311 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	PUP1	P25043	261 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	YJU3	P28321	313 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	NPL4	P33755	580 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-JR2	P47099	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-DR1	Q03856	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-ML1	Q04706	440 aa	Known RBP	4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-BR	Q12217	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-NL2	Q12470	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	TY1A-GR2	Q12485	440 aa		4.92	□□□□□ -1.62
HTA1	YDR225W	GCD11	P32481	527 aa	Known RBP	4.91	□□□□□ -1.62
HTA1	YDR225W	SSF1	P38789	453 aa	Predicted RBP	4.91	□□□□□ -1.62
HTA1	YDR225W	SNU71	P53207	620 aa	Known RBP	4.91	□□□□□ -1.62
HTA1	YDR225W	YML083C	Q04526	418 aa		4.91	□□□□□ -1.62
HTA1	YDR225W	MRX10	Q05648	414 aa		4.91	□□□□□ -1.62
HTA1	YDR225W	ENO1	P00924	437 aa	Known RBP	4.9	□□□□□ -1.63
HTA1	YDR225W	ENO2	P00925	437 aa	Known RBP	4.9	□□□□□ -1.63
HTA1	YDR225W	ARG8	P18544	423 aa		4.9	□□□□□ -1.63
HTA1	YDR225W	HEM3	P28789	327 aa		4.9	□□□□□ -1.63
HTA1	YDR225W	SIS2	P36024	562 aa		4.9	□□□□□ -1.63
HTA1	YDR225W	SEN54	Q02825	467 aa	Predicted RBP	4.9	□□□□□ -1.63
HTA1	YDR225W	SRC1	Q03707	834 aa		4.9	□□□□□ -1.63
HTA1	YDR225W	KEX2	P13134	814 aa		4.89	□□□□□ -1.63
HTA1	YDR225W	AMS1	P22855	1083 aa		4.89	□□□□□ -1.63
HTA1	YDR225W	YDJ1	P25491	409 aa	Known RBP	4.89	□□□□□ -1.63
HTA1	YDR225W	SPT5	P27692	1063 aa	Known RBP	4.89	□□□□□ -1.63
HTA1	YDR225W	ERF2	Q06551	359 aa		4.89	□□□□□ -1.63
HTA1	YDR225W	HAT1	Q12341	374 aa		4.89	□□□□□ -1.63
HTA1	YDR225W	RSC30	P38781	883 aa		4.88	□□□□□ -1.63
HTA1	YDR225W	MAK16	P10962	306 aa	Predicted RBP	4.87	□□□□□ -1.63
HTA1	YDR225W	MRF1	P30775	413 aa	Predicted RBP	4.87	□□□□□ -1.63
HTA1	YDR225W	TGL4	P36165	910 aa		4.87	□□□□□ -1.63
HTA1	YDR225W	RIM21	P48565	533 aa		4.87	□□□□□ -1.63
HTA1	YDR225W	RRN6	P32786	894 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms