RNA–Protein interactions for RNA: YDR119W

VBA4, Transcript of Protein of unknown function, yeast

Gene VBA4, Length 2,307 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA4	YDR119W	ENO2	P00925	437 aa	Known RBP	4.15	□□□□□ -1.74
VBA4	YDR119W	YHL050C	P38721	697 aa		4.15	□□□□□ -1.74
VBA4	YDR119W	YHR219W	P38900	624 aa		4.15	□□□□□ -1.74
VBA4	YDR119W	MRX10	Q05648	414 aa		4.15	□□□□□ -1.74
VBA4	YDR119W	YEL077C	Q3E7X8	1277 aa		4.15	□□□□□ -1.74
VBA4	YDR119W	SEC8	P32855	1065 aa		4.15	□□□□□ -1.75
VBA4	YDR119W	STS1	P38637	319 aa		4.15	□□□□□ -1.75
VBA4	YDR119W	TFG1	P41895	735 aa	Predicted RBP	4.15	□□□□□ -1.75
VBA4	YDR119W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
VBA4	YDR119W	MAG2	Q06436	670 aa	Known RBP	4.15	□□□□□ -1.75
VBA4	YDR119W	SRP40	P32583	406 aa	Predicted RBP	4.14	□□□□□ -1.75
VBA4	YDR119W	YLR326W	Q06170	240 aa	Known RBP	4.14	□□□□□ -1.75
VBA4	YDR119W	PKH3	Q03306	898 aa	Predicted RBP	4.13	□□□□□ -1.75
VBA4	YDR119W	PPX1	P38698	397 aa		4.13	□□□□□ -1.75
VBA4	YDR119W	THI12	P42883	340 aa		4.13	□□□□□ -1.75
VBA4	YDR119W	THI5	P43534	340 aa		4.13	□□□□□ -1.75
VBA4	YDR119W	THI11	P47183	340 aa		4.13	□□□□□ -1.75
VBA4	YDR119W	THI13	Q07748	340 aa		4.13	□□□□□ -1.75
VBA4	YDR119W	YDJ1	P25491	409 aa	Known RBP	4.12	□□□□□ -1.75
VBA4	YDR119W	SPT5	P27692	1063 aa	Known RBP	4.12	□□□□□ -1.75
VBA4	YDR119W	RIM21	P48565	533 aa		4.12	□□□□□ -1.75
VBA4	YDR119W	ALG12	P53730	551 aa		4.12	□□□□□ -1.75
VBA4	YDR119W	ECM23	Q02710	187 aa		4.12	□□□□□ -1.75
VBA4	YDR119W	KAR5	Q04746	504 aa		4.12	□□□□□ -1.75
VBA4	YDR119W	WHI5	Q12416	295 aa		4.12	□□□□□ -1.75
VBA4	YDR119W	STB3	Q12427	513 aa		4.12	□□□□□ -1.75
VBA4	YDR119W	SSB1	P11484	613 aa	Known RBP	4.12	□□□□□ -1.75
VBA4	YDR119W	YKL091C	P33324	310 aa	Known RBP	4.12	□□□□□ -1.75
VBA4	YDR119W	GRS1	P38088	690 aa	Known RBP	4.12	□□□□□ -1.75
VBA4	YDR119W	SSB2	P40150	613 aa	Known RBP	4.12	□□□□□ -1.75
VBA4	YDR119W	HST2	P53686	357 aa		4.12	□□□□□ -1.75
VBA4	YDR119W	CIT2	P08679	460 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	TRL1	P09880	827 aa	Known RBP	4.11	□□□□□ -1.75
VBA4	YDR119W	MGE1	P38523	228 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	MDJ2	P42834	146 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	ZDS1	P50111	915 aa	Known RBP	4.11	□□□□□ -1.75
VBA4	YDR119W	YMR196W	Q04336	1088 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	MMP1	Q12372	583 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	DBP1	P24784	617 aa	Known RBP	4.11	□□□□□ -1.75
VBA4	YDR119W	RAD54	P32863	898 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	VAC8	P39968	578 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	TPM2	P40414	161 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	YFR006W	P43590	535 aa		4.11	□□□□□ -1.75
VBA4	YDR119W	ESS1	P22696	170 aa		4.1	□□□□□ -1.75
VBA4	YDR119W	CLB5	P30283	435 aa		4.1	□□□□□ -1.75
VBA4	YDR119W	FPK1	P53739	893 aa		4.1	□□□□□ -1.75
VBA4	YDR119W	POB3	Q04636	552 aa	Known RBP	4.1	□□□□□ -1.75
VBA4	YDR119W	ARG8	P18544	423 aa		4.1	□□□□□ -1.75
VBA4	YDR119W	PEP12	P32854	288 aa		4.1	□□□□□ -1.75
VBA4	YDR119W	ORC6	P38826	435 aa		4.1	□□□□□ -1.75
VBA4	YDR119W	PMC1	P38929	1173 aa	Predicted RBP	4.1	□□□□□ -1.75
VBA4	YDR119W	IOC3	P43596	787 aa		4.1	□□□□□ -1.75
VBA4	YDR119W	NIS1	P53939	407 aa		4.1	□□□□□ -1.75
VBA4	YDR119W	MET1	P36150	593 aa		4.09	□□□□□ -1.75
VBA4	YDR119W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
VBA4	YDR119W	UBX7	P38349	436 aa		4.09	□□□□□ -1.75
VBA4	YDR119W	NOP2	P40991	618 aa	Known RBP	4.09	□□□□□ -1.75
VBA4	YDR119W	YJR107W	P47145	328 aa		4.09	□□□□□ -1.75
VBA4	YDR119W	KTR7	P40504	517 aa		4.09	□□□□□ -1.76
VBA4	YDR119W	ALD3	P54114	506 aa		4.09	□□□□□ -1.76
VBA4	YDR119W	YOL057W	Q08225	711 aa		4.09	□□□□□ -1.76
VBA4	YDR119W	SCJ1	P25303	377 aa		4.08	□□□□□ -1.76
VBA4	YDR119W	YJU3	P28321	313 aa		4.08	□□□□□ -1.76
VBA4	YDR119W	MNN4	P36044	1178 aa		4.08	□□□□□ -1.76
VBA4	YDR119W	TPS3	P38426	1054 aa	Known RBP	4.08	□□□□□ -1.76
VBA4	YDR119W	ALD6	P54115	500 aa	Known RBP	4.08	□□□□□ -1.76
VBA4	YDR119W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
VBA4	YDR119W	RGR1	P19263	1082 aa		4.07	□□□□□ -1.76
VBA4	YDR119W	YPP1	P46951	817 aa		4.07	□□□□□ -1.76
VBA4	YDR119W	CWC15	Q03772	175 aa	Known RBP	4.07	□□□□□ -1.76
VBA4	YDR119W	GAL2	P13181	574 aa		4.07	□□□□□ -1.76
VBA4	YDR119W	GRX4	P32642	244 aa		4.07	□□□□□ -1.76
VBA4	YDR119W	PRY3	P47033	881 aa		4.07	□□□□□ -1.76
VBA4	YDR119W	MNL2	Q12205	849 aa		4.07	□□□□□ -1.76
VBA4	YDR119W	ATG1	P53104	897 aa		4.06	□□□□□ -1.76
VBA4	YDR119W	RPN4	Q03465	531 aa		4.06	□□□□□ -1.76
VBA4	YDR119W	NSE3	Q05541	303 aa		4.06	□□□□□ -1.76
VBA4	YDR119W	MAD1	P40957	749 aa		4.06	□□□□□ -1.76
VBA4	YDR119W	YJL049W	P47048	450 aa		4.06	□□□□□ -1.76
VBA4	YDR119W	ATH1	P48016	1211 aa		4.06	□□□□□ -1.76
VBA4	YDR119W	YGR273C	P53329	174 aa		4.06	□□□□□ -1.76
VBA4	YDR119W	YGR161W-C	Q3E744	92 aa		4.06	□□□□□ -1.76
VBA4	YDR119W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
VBA4	YDR119W	RDS2	P19541	446 aa	Known RBP	4.05	□□□□□ -1.76
VBA4	YDR119W	YGL081W	P53156	320 aa		4.05	□□□□□ -1.76
VBA4	YDR119W	MVP1	P40959	511 aa	Known RBP	4.05	□□□□□ -1.76
VBA4	YDR119W	PUF6	Q04373	656 aa	Known RBP	4.05	□□□□□ -1.76
VBA4	YDR119W	NUT2	Q06213	157 aa		4.05	□□□□□ -1.76
VBA4	YDR119W	WRS1	Q12109	432 aa	Known RBP	4.05	□□□□□ -1.76
VBA4	YDR119W	GUT1	P32190	709 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	BUD6	P41697	788 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	SCY1	P53009	804 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	KIP3	P53086	805 aa	Known RBP	4.04	□□□□□ -1.76
VBA4	YDR119W	YDL121C	Q07541	149 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	GAL11	P19659	1081 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
VBA4	YDR119W	FYV10	P40492	516 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	TY4A-J	P47023	414 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	VPS16	Q03308	798 aa		4.04	□□□□□ -1.76
VBA4	YDR119W	CDC53	Q12018	815 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms