RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C VPS15P22219 1454 aa2.93□□□□□ -1.94
BRE1YDL074C NUP159P40477 1460 aa2.93□□□□□ -1.94
BRE1YDL074C IRC20Q06554 1556 aa2.93□□□□□ -1.94
BRE1YDL074C YDR344CQ05510 147 aa2.93□□□□□ -1.94
BRE1YDL074C PDR10P51533 1564 aa2.92□□□□□ -1.94
BRE1YDL074C BUD3P25558 1636 aa2.92□□□□□ -1.94
BRE1YDL074C SAM3Q08986 587 aa2.92□□□□□ -1.94
BRE1YDL074C SRB8P25648 1427 aa2.92□□□□□ -1.94
BRE1YDL074C MMS1Q06211 1407 aa2.92□□□□□ -1.94
BRE1YDL074C PDR12Q02785 1511 aa2.92□□□□□ -1.94
BRE1YDL074C SCT1P32784 759 aa2.92□□□□□ -1.94
BRE1YDL074C SSM4P40318 1319 aa2.92□□□□□ -1.94
BRE1YDL074C DNF1P32660 1571 aa2.91□□□□□ -1.94
BRE1YDL074C GCN2P15442 1659 aa2.91□□□□□ -1.94
BRE1YDL074C TY3B-GQ99315 1547 aa2.9□□□□□ -1.94
BRE1YDL074C VMA1P17255 1071 aaKnown RBP2.9□□□□□ -1.94
BRE1YDL074C GDB1Q06625 1536 aa2.9□□□□□ -1.95
BRE1YDL074C PAF1P38351 445 aa2.9□□□□□ -1.95
BRE1YDL074C IQG1Q12280 1495 aa2.89□□□□□ -1.95
BRE1YDL074C GAR1P28007 205 aaKnown RBP2.89□□□□□ -1.95
BRE1YDL074C POL5P39985 1022 aaKnown RBP2.89□□□□□ -1.95
BRE1YDL074C CKB1P43639 278 aa2.89□□□□□ -1.95
BRE1YDL074C BUD21Q08492 214 aaPredicted RBP2.89□□□□□ -1.95
BRE1YDL074C ARO1P08566 1588 aaKnown RBP2.89□□□□□ -1.95
BRE1YDL074C NUP157P40064 1391 aaKnown RBP2.89□□□□□ -1.95
BRE1YDL074C SPO14P36126 1683 aa2.89□□□□□ -1.95
BRE1YDL074C SEC7P11075 2009 aaKnown RBP2.89□□□□□ -1.95
BRE1YDL074C NOP7P53261 605 aaKnown RBP2.89□□□□□ -1.95
BRE1YDL074C PEX29Q03370 554 aa2.88□□□□□ -1.95
BRE1YDL074C YRF1-1P0CX20 1796 aa2.88□□□□□ -1.95
BRE1YDL074C YRF1-5P0CX21 1796 aa2.88□□□□□ -1.95
BRE1YDL074C YRF1-8P0CX22 1796 aa2.88□□□□□ -1.95
BRE1YDL074C SEC3P33332 1336 aaKnown RBP2.88□□□□□ -1.95
BRE1YDL074C DBP1P24784 617 aaKnown RBP2.87□□□□□ -1.95
BRE1YDL074C PTC4P38089 393 aa2.87□□□□□ -1.95
BRE1YDL074C MRM1P25270 412 aa2.87□□□□□ -1.95
BRE1YDL074C YMR1P47147 688 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
BRE1YDL074C ELP4Q02884 456 aaKnown RBP2.87□□□□□ -1.95
BRE1YDL074C LTE1P07866 1435 aa2.87□□□□□ -1.95
BRE1YDL074C TRM3Q07527 1436 aa2.86□□□□□ -1.95
BRE1YDL074C YFR006WP43590 535 aa2.86□□□□□ -1.95
BRE1YDL074C ABP1P15891 592 aaKnown RBP2.85□□□□□ -1.95
BRE1YDL074C YEL023CP39992 682 aa2.85□□□□□ -1.95
BRE1YDL074C URN1Q06525 465 aaKnown RBP2.85□□□□□ -1.95
BRE1YDL074C PDR5P33302 1511 aaKnown RBP2.85□□□□□ -1.95
BRE1YDL074C BNR1P40450 1375 aa2.85□□□□□ -1.95
BRE1YDL074C DOP1Q03921 1698 aa2.85□□□□□ -1.95
BRE1YDL074C PSD2P53037 1138 aaKnown RBP2.84□□□□□ -1.95
BRE1YDL074C YAH1Q12184 172 aaKnown RBP2.84□□□□□ -1.95
BRE1YDL074C YSP2Q06681 1438 aa2.84□□□□□ -1.95
BRE1YDL074C HTA1P04911 132 aaKnown RBP2.84□□□□□ -1.96
BRE1YDL074C HTA2P04912 132 aa2.84□□□□□ -1.96
BRE1YDL074C BFR2Q06631 534 aaKnown RBP2.84□□□□□ -1.96
BRE1YDL074C ENP1P38333 483 aaKnown RBP2.83□□□□□ -1.96
BRE1YDL074C STS1P38637 319 aa2.83□□□□□ -1.96
BRE1YDL074C VPS29P38759 282 aa2.83□□□□□ -1.96
BRE1YDL074C DRS2P39524 1355 aa2.83□□□□□ -1.96
BRE1YDL074C CHC1P22137 1653 aaKnown RBP2.83□□□□□ -1.96
BRE1YDL074C YOR093CQ12275 1648 aa2.83□□□□□ -1.96
BRE1YDL074C GYP5Q12344 894 aa2.83□□□□□ -1.96
BRE1YDL074C DCW1P36091 449 aa2.82□□□□□ -1.96
BRE1YDL074C ARH1P48360 493 aa2.81□□□□□ -1.96
BRE1YDL074C PML39Q03760 334 aa2.81□□□□□ -1.96
BRE1YDL074C MHP1P43638 1398 aa2.81□□□□□ -1.96
BRE1YDL074C NAP1P25293 417 aaKnown RBP2.81□□□□□ -1.96
BRE1YDL074C NUP188P52593 1655 aaKnown RBP2.8□□□□□ -1.96
BRE1YDL074C RAV1P47104 1357 aa2.8□□□□□ -1.96
BRE1YDL074C ESL2P36168 1195 aa2.8□□□□□ -1.96
BRE1YDL074C DNF2Q12675 1612 aa2.8□□□□□ -1.96
BRE1YDL074C RTC1Q08281 1341 aa2.8□□□□□ -1.96
BRE1YDL074C RAS1P01119 309 aa2.79□□□□□ -1.96
BRE1YDL074C YLR271WQ06152 274 aa2.78□□□□□ -1.96
BRE1YDL074C IML1P47170 1584 aa2.78□□□□□ -1.96
BRE1YDL074C TY3B-IQ7LHG5 1498 aaKnown RBP2.77□□□□□ -1.97
BRE1YDL074C HAP1P0CE41 1502 aa2.77□□□□□ -1.97
BRE1YDL074C VMR1P38735 1592 aa2.77□□□□□ -1.97
BRE1YDL074C SPT23P35210 1082 aa2.77□□□□□ -1.97
BRE1YDL074C MLP1Q02455 1875 aaKnown RBP2.77□□□□□ -1.97
BRE1YDL074C NOP2P40991 618 aaKnown RBP2.76□□□□□ -1.97
BRE1YDL074C SPT7P35177 1332 aa2.75□□□□□ -1.97
BRE1YDL074C TAF5P38129 798 aa2.75□□□□□ -1.97
BRE1YDL074C YAP3P38749 330 aa2.75□□□□□ -1.97
BRE1YDL074C IPL1P38991 367 aa2.75□□□□□ -1.97
BRE1YDL074C CFT1Q06632 1357 aaKnown RBP2.74□□□□□ -1.97
BRE1YDL074C RTG3P38165 486 aa2.74□□□□□ -1.97
BRE1YDL074C KIP3P53086 805 aaKnown RBP2.74□□□□□ -1.97
BRE1YDL074C PDS5Q04264 1277 aa2.74□□□□□ -1.97
BRE1YDL074C YLR419WQ06698 1435 aaKnown RBP2.74□□□□□ -1.97
BRE1YDL074C MID1P41821 548 aa2.74□□□□□ -1.97
BRE1YDL074C IOC4Q04213 475 aa2.74□□□□□ -1.97
BRE1YDL074C BNI1P41832 1953 aa2.73□□□□□ -1.97
BRE1YDL074C SPE2P21182 396 aa2.73□□□□□ -1.97
BRE1YDL074C ALD4P46367 519 aaKnown RBP2.73□□□□□ -1.97
BRE1YDL074C YML082WQ04533 649 aaKnown RBP2.73□□□□□ -1.97
BRE1YDL074C ITT1Q04638 464 aa2.73□□□□□ -1.97
BRE1YDL074C RPP0P05317 312 aaKnown RBP2.72□□□□□ -1.97
BRE1YDL074C MRX12P47084 519 aa2.72□□□□□ -1.97
BRE1YDL074C NRD1P53617 575 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
BRE1YDL074C ORC1P54784 914 aaPredicted RBP2.72□□□□□ -1.97
BRE1YDL074C PDR11P40550 1411 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms