RNA–Protein interactions for RNA: YCR081W

SRB8, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB8, Length 4,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB8YCR081W SPT16P32558 1035 aaKnown RBP3.36□□□□□ -1.87
SRB8YCR081W SAP190P36123 1033 aa3.36□□□□□ -1.87
SRB8YCR081W YOL087CQ99247 1116 aa3.36□□□□□ -1.87
SRB8YCR081W RAD9P14737 1309 aa3.36□□□□□ -1.87
SRB8YCR081W PAN1P32521 1480 aa3.36□□□□□ -1.87
SRB8YCR081W NOP14Q99207 810 aaKnown RBP3.36□□□□□ -1.87
SRB8YCR081W TY1B-BRQ12193 1756 aa3.36□□□□□ -1.87
SRB8YCR081W TY1B-GR3Q12316 1755 aa3.36□□□□□ -1.87
SRB8YCR081W TY1B-ORQ92393 1755 aa3.36□□□□□ -1.87
SRB8YCR081W NST1P53935 1240 aa3.36□□□□□ -1.87
SRB8YCR081W RPO21P04050 1733 aaKnown RBP3.36□□□□□ -1.87
SRB8YCR081W SLN1P39928 1220 aaPredicted RBP3.35□□□□□ -1.87
SRB8YCR081W TY1B-JR2P47100 1755 aaKnown RBP3.35□□□□□ -1.87
SRB8YCR081W TY1B-ER2Q03619 1755 aa3.35□□□□□ -1.87
SRB8YCR081W TY1B-MR1Q04214 1755 aa3.35□□□□□ -1.87
SRB8YCR081W TY1B-MR2Q04670 1755 aaKnown RBP3.35□□□□□ -1.87
SRB8YCR081W TY1B-LR1Q12088 1755 aaKnown RBP3.35□□□□□ -1.87
SRB8YCR081W TY1B-NL1Q12112 1755 aa3.35□□□□□ -1.87
SRB8YCR081W TY1B-GR1Q12141 1755 aa3.35□□□□□ -1.87
SRB8YCR081W TY1B-BLQ12490 1755 aa3.35□□□□□ -1.87
SRB8YCR081W EAF7P53911 425 aaKnown RBP3.34□□□□□ -1.87
SRB8YCR081W NOP8Q08287 484 aaPredicted RBP3.34□□□□□ -1.87
SRB8YCR081W DUR1,2P32528 1835 aaKnown RBP3.34□□□□□ -1.87
SRB8YCR081W TLG1Q03322 224 aa3.34□□□□□ -1.88
SRB8YCR081W FPR4Q06205 392 aaPredicted RBP3.34□□□□□ -1.88
SRB8YCR081W NOP58Q12499 511 aaKnown RBP3.33□□□□□ -1.88
SRB8YCR081W VPS15P22219 1454 aa3.33□□□□□ -1.88
SRB8YCR081W CIN4P39110 191 aa3.33□□□□□ -1.88
SRB8YCR081W YNL050CP53952 270 aa3.33□□□□□ -1.88
SRB8YCR081W SPT21P35209 758 aa3.33□□□□□ -1.88
SRB8YCR081W RAD16P31244 790 aa3.33□□□□□ -1.88
SRB8YCR081W AAD16Q02895 342 aa3.33□□□□□ -1.88
SRB8YCR081W ORM2Q06144 216 aa3.33□□□□□ -1.88
SRB8YCR081W CTR9P89105 1077 aa3.32□□□□□ -1.88
SRB8YCR081W APL5Q08951 932 aaKnown RBP3.32□□□□□ -1.88
SRB8YCR081W SPO14P36126 1683 aa3.32□□□□□ -1.88
SRB8YCR081W URB1P34241 1764 aaKnown RBP3.32□□□□□ -1.88
SRB8YCR081W SNT2P53127 1403 aa3.31□□□□□ -1.88
SRB8YCR081W SPT2P06843 333 aaPredicted RBP3.31□□□□□ -1.88
SRB8YCR081W PEA2P40091 420 aa3.31□□□□□ -1.88
SRB8YCR081W MDG1P53885 366 aa3.31□□□□□ -1.88
SRB8YCR081W YVC1Q12324 675 aa3.31□□□□□ -1.88
SRB8YCR081W NUP188P52593 1655 aaKnown RBP3.31□□□□□ -1.88
SRB8YCR081W MLP1Q02455 1875 aaKnown RBP3.31□□□□□ -1.88
SRB8YCR081W ERV41Q04651 352 aa3.31□□□□□ -1.88
SRB8YCR081W RPC31P17890 251 aa3.3□□□□□ -1.88
SRB8YCR081W SNU71P53207 620 aaKnown RBP3.3□□□□□ -1.88
SRB8YCR081W ALD3P54114 506 aa3.3□□□□□ -1.88
SRB8YCR081W CAT8P39113 1433 aa3.3□□□□□ -1.88
SRB8YCR081W NTE1Q04958 1679 aa3.3□□□□□ -1.88
SRB8YCR081W MED8P38304 223 aa3.3□□□□□ -1.88
SRB8YCR081W DRS2P39524 1355 aa3.3□□□□□ -1.88
SRB8YCR081W RPS0AP32905 252 aaKnown RBP3.3□□□□□ -1.88
SRB8YCR081W MSH4P40965 878 aaPredicted RBP3.3□□□□□ -1.88
SRB8YCR081W HIF1Q12373 385 aa3.3□□□□□ -1.88
SRB8YCR081W CDC11P32458 415 aa3.29□□□□□ -1.88
SRB8YCR081W VID30P53076 958 aa3.29□□□□□ -1.88
SRB8YCR081W VMR1P38735 1592 aa3.29□□□□□ -1.88
SRB8YCR081W YRF1-2P40105 1681 aa3.29□□□□□ -1.88
SRB8YCR081W PRI1P10363 409 aa3.29□□□□□ -1.88
SRB8YCR081W RAD51P25454 400 aa3.29□□□□□ -1.88
SRB8YCR081W MSP1P28737 362 aa3.29□□□□□ -1.88
SRB8YCR081W POL31P46957 487 aa3.29□□□□□ -1.88
SRB8YCR081W HAP5Q02516 242 aa3.29□□□□□ -1.88
SRB8YCR081W VTH1P40438 1549 aa3.29□□□□□ -1.88
SRB8YCR081W CLN1P20437 546 aa3.28□□□□□ -1.88
SRB8YCR081W RAD50P12753 1312 aa3.28□□□□□ -1.88
SRB8YCR081W BUD3P25558 1636 aa3.28□□□□□ -1.88
SRB8YCR081W PXR1P53335 271 aaPredicted RBP3.28□□□□□ -1.88
SRB8YCR081W NUP192P47054 1683 aa3.28□□□□□ -1.88
SRB8YCR081W APC1P53886 1748 aa3.28□□□□□ -1.88
SRB8YCR081W RAD3P06839 778 aa3.27□□□□□ -1.89
SRB8YCR081W MPE1P35728 441 aaKnown RBP3.27□□□□□ -1.89
SRB8YCR081W TCD1P38756 429 aa3.27□□□□□ -1.89
SRB8YCR081W HUL5P53119 910 aa3.27□□□□□ -1.89
SRB8YCR081W BMS1Q08965 1183 aaKnown RBP3.27□□□□□ -1.89
SRB8YCR081W MSH1P25846 959 aa3.27□□□□□ -1.89
SRB8YCR081W KNS1P32350 737 aaPredicted RBP3.27□□□□□ -1.89
SRB8YCR081W ECM1P39715 212 aa3.27□□□□□ -1.89
SRB8YCR081W TSR3Q12094 313 aaKnown RBP3.27□□□□□ -1.89
SRB8YCR081W ROM2P51862 1356 aaKnown RBP3.27□□□□□ -1.89
SRB8YCR081W TOA1P32773 286 aa3.27□□□□□ -1.89
SRB8YCR081W YCK3P39962 524 aa3.27□□□□□ -1.89
SRB8YCR081W PRP3Q03338 469 aaPredicted RBP3.27□□□□□ -1.89
SRB8YCR081W ABP140Q08641 628 aaKnown RBP3.27□□□□□ -1.89
SRB8YCR081W PCT1P13259 424 aa3.27□□□□□ -1.89
SRB8YCR081W RPG1P38249 964 aaKnown RBP3.27□□□□□ -1.89
SRB8YCR081W BRL1P38770 471 aa3.27□□□□□ -1.89
SRB8YCR081W VPS30Q02948 557 aa3.27□□□□□ -1.89
SRB8YCR081W NHA1Q99271 985 aa3.27□□□□□ -1.89
SRB8YCR081W LTV1P34078 463 aa3.26□□□□□ -1.89
SRB8YCR081W FUN12P39730 1002 aaKnown RBP3.26□□□□□ -1.89
SRB8YCR081W MPP10P47083 593 aaKnown RBP3.26□□□□□ -1.89
SRB8YCR081W KRE33P53914 1056 aaKnown RBP3.26□□□□□ -1.89
SRB8YCR081W YRF1-1P0CX20 1796 aa3.26□□□□□ -1.89
SRB8YCR081W YRF1-5P0CX21 1796 aa3.26□□□□□ -1.89
SRB8YCR081W YRF1-8P0CX22 1796 aa3.26□□□□□ -1.89
SRB8YCR081W NAB3P38996 802 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SRB8YCR081W IAH1P41734 238 aa3.26□□□□□ -1.89
SRB8YCR081W ETT1Q08421 412 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms