RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeastyeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGK1YCR012W YMR196WQ04336 1088 aa7.65□□□□□ -1.18
PGK1YCR012W FKH1P40466 484 aa7.64□□□□□ -1.19
PGK1YCR012W ALD4P46367 519 aaKnown RBP7.64□□□□□ -1.19
PGK1YCR012W YDL144CQ07589 356 aa7.64□□□□□ -1.19
PGK1YCR012W RPC31P17890 251 aa7.63□□□□□ -1.19
PGK1YCR012W NAP1P25293 417 aaKnown RBP7.63□□□□□ -1.19
PGK1YCR012W YRB30P53107 440 aaPredicted RBP7.63□□□□□ -1.19
PGK1YCR012W BCK1Q01389 1478 aa7.62□□□□□ -1.19
PGK1YCR012W MLP1Q02455 1875 aaKnown RBP7.62□□□□□ -1.19
PGK1YCR012W RAD9P14737 1309 aa7.62□□□□□ -1.19
PGK1YCR012W TRK1P12685 1235 aa7.6□□□□□ -1.19
PGK1YCR012W YEF3P16521 1044 aaKnown RBP7.59□□□□□ -1.19
PGK1YCR012W SUI2P20459 304 aaKnown RBP7.58□□□□□ -1.2
PGK1YCR012W CAB1Q04430 367 aa7.58□□□□□ -1.2
PGK1YCR012W THI12P42883 340 aa7.57□□□□□ -1.2
PGK1YCR012W THI5P43534 340 aa7.57□□□□□ -1.2
PGK1YCR012W THI11P47183 340 aa7.57□□□□□ -1.2
PGK1YCR012W THI13Q07748 340 aa7.57□□□□□ -1.2
PGK1YCR012W SNF2P22082 1703 aa7.56□□□□□ -1.2
PGK1YCR012W MPP10P47083 593 aaKnown RBP7.56□□□□□ -1.2
PGK1YCR012W IME2P32581 645 aa7.55□□□□□ -1.2
PGK1YCR012W RTR1P40084 226 aaPredicted RBP7.54□□□□□ -1.2
PGK1YCR012W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
PGK1YCR012W YFR016CP43597 1233 aaKnown RBP7.53□□□□□ -1.2
PGK1YCR012W YML133CQ03099 1374 aa7.53□□□□□ -1.2
PGK1YCR012W YLL067CQ07888 1374 aa7.53□□□□□ -1.2
PGK1YCR012W YLL066CQ99208 1374 aa7.53□□□□□ -1.2
PGK1YCR012W OPY1P38271 328 aa7.52□□□□□ -1.21
PGK1YCR012W RAD2P07276 1031 aa7.51□□□□□ -1.21
PGK1YCR012W KAR2P16474 682 aaKnown RBP7.51□□□□□ -1.21
PGK1YCR012W EAF7P53911 425 aaKnown RBP7.51□□□□□ -1.21
PGK1YCR012W SAP155P43612 1002 aa7.5□□□□□ -1.21
PGK1YCR012W MRX12P47084 519 aa7.5□□□□□ -1.21
PGK1YCR012W RRP46P53256 223 aaPredicted RBP7.5□□□□□ -1.21
PGK1YCR012W KRE5P22023 1365 aa7.49□□□□□ -1.21
PGK1YCR012W HAP1P0CE41 1502 aa7.49□□□□□ -1.21
PGK1YCR012W CLC1P17891 233 aa7.49□□□□□ -1.21
PGK1YCR012W PSK1P31374 1356 aa7.48□□□□□ -1.21
PGK1YCR012W YIR014WP40570 242 aa7.48□□□□□ -1.21
PGK1YCR012W BUD27P43573 796 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
PGK1YCR012W TAP42Q04372 366 aa7.48□□□□□ -1.21
PGK1YCR012W PDI1P17967 522 aaKnown RBP7.47□□□□□ -1.21
PGK1YCR012W TPD3P31383 635 aa7.47□□□□□ -1.21
PGK1YCR012W PAP2P53632 584 aaKnown RBP7.47□□□□□ -1.21
PGK1YCR012W RCM1P53972 490 aa7.47□□□□□ -1.21
PGK1YCR012W YAH1Q12184 172 aaKnown RBP7.47□□□□□ -1.21
PGK1YCR012W PRD1P25375 712 aa7.46□□□□□ -1.22
PGK1YCR012W DAL5P15365 543 aa7.45□□□□□ -1.22
PGK1YCR012W THI22Q06490 572 aa7.45□□□□□ -1.22
PGK1YCR012W YPR148CQ06523 435 aa7.45□□□□□ -1.22
PGK1YCR012W LEU2P04173 364 aaPredicted RBP7.44□□□□□ -1.22
PGK1YCR012W PPH3P32345 308 aa7.44□□□□□ -1.22
PGK1YCR012W YIL092WP40497 633 aa7.44□□□□□ -1.22
PGK1YCR012W RTF1P53064 558 aa7.44□□□□□ -1.22
PGK1YCR012W RIA1P53893 1110 aa7.44□□□□□ -1.22
PGK1YCR012W GLN1P32288 370 aaKnown RBP7.43□□□□□ -1.22
PGK1YCR012W GRX4P32642 244 aa7.43□□□□□ -1.22
PGK1YCR012W HEF3P53978 1044 aaKnown RBP7.43□□□□□ -1.22
PGK1YCR012W HIM1Q06674 414 aa7.43□□□□□ -1.22
PGK1YCR012W TY1B-NL2Q99337 1749 aaKnown RBP7.42□□□□□ -1.22
PGK1YCR012W POL32P47110 350 aa7.42□□□□□ -1.22
PGK1YCR012W MAK21Q12176 1025 aaKnown RBP7.42□□□□□ -1.22
PGK1YCR012W SIR4P11978 1358 aa7.42□□□□□ -1.22
PGK1YCR012W USO1P25386 1790 aa7.41□□□□□ -1.22
PGK1YCR012W CSE4P36012 229 aa7.41□□□□□ -1.22
PGK1YCR012W MTR4P47047 1073 aaKnown RBP7.41□□□□□ -1.22
PGK1YCR012W AUS1Q08409 1394 aa7.41□□□□□ -1.22
PGK1YCR012W SNF7P39929 240 aaKnown RBP7.4□□□□□ -1.22
PGK1YCR012W RTT109Q07794 436 aa7.4□□□□□ -1.22
PGK1YCR012W CPS1P27614 576 aa7.39□□□□□ -1.23
PGK1YCR012W YIL055CP40523 627 aaKnown RBP7.39□□□□□ -1.23
PGK1YCR012W YRF1-4O13559 1382 aa7.38□□□□□ -1.23
PGK1YCR012W PUF6Q04373 656 aaKnown RBP7.38□□□□□ -1.23
PGK1YCR012W PCT1P13259 424 aa7.37□□□□□ -1.23
PGK1YCR012W RPO41P13433 1351 aaKnown RBP7.36□□□□□ -1.23
PGK1YCR012W PRI1P10363 409 aa7.36□□□□□ -1.23
PGK1YCR012W CAB3P36076 571 aa7.36□□□□□ -1.23
PGK1YCR012W APP1P53933 587 aa7.36□□□□□ -1.23
PGK1YCR012W ROX1P25042 368 aa7.35□□□□□ -1.23
PGK1YCR012W VPS24P36095 224 aaKnown RBP7.34□□□□□ -1.23
PGK1YCR012W PTP3P40048 928 aa7.34□□□□□ -1.23
PGK1YCR012W YNR029CP53729 429 aaKnown RBP7.34□□□□□ -1.23
PGK1YCR012W GAS4Q08271 471 aa7.34□□□□□ -1.23
PGK1YCR012W RPS24AP0CX31 135 aaKnown RBP7.33□□□□□ -1.24
PGK1YCR012W RPS24BP0CX32 135 aaKnown RBP7.33□□□□□ -1.24
PGK1YCR012W TRP5P00931 707 aaKnown RBP7.32□□□□□ -1.24
PGK1YCR012W DPS1P04802 557 aaKnown RBP7.32□□□□□ -1.24
PGK1YCR012W AKL1P38080 1108 aaKnown RBP7.32□□□□□ -1.24
PGK1YCR012W DJP1P40564 432 aa7.32□□□□□ -1.24
PGK1YCR012W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
PGK1YCR012W PRP43P53131 767 aaKnown RBP7.32□□□□□ -1.24
PGK1YCR012W ECM16Q04217 1267 aaKnown RBP7.32□□□□□ -1.24
PGK1YCR012W GYP7P48365 746 aa7.31□□□□□ -1.24
PGK1YCR012W DSD1P53095 428 aa7.31□□□□□ -1.24
PGK1YCR012W RRT14P40470 206 aa7.3□□□□□ -1.24
PGK1YCR012W ZDS1P50111 915 aaKnown RBP7.3□□□□□ -1.24
PGK1YCR012W YNL050CP53952 270 aa7.3□□□□□ -1.24
PGK1YCR012W ADE6P38972 1358 aaKnown RBP7.3□□□□□ -1.24
PGK1YCR012W MAM1P40065 302 aa7.29□□□□□ -1.24
PGK1YCR012W LSP1Q12230 341 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms