RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	DNF3	Q12674	1656 aa		13.17	□□□□□ -0.3
YCL074W	YCL074W	CFT1	Q06632	1357 aa	Known RBP	13.17	□□□□□ -0.3
YCL074W	YCL074W	SNF2	P22082	1703 aa		13.14	□□□□□ -0.31
YCL074W	YCL074W	TRK1	P12685	1235 aa		13.14	□□□□□ -0.31
YCL074W	YCL074W	YEF3	P16521	1044 aa	Known RBP	13.14	□□□□□ -0.31
YCL074W	YCL074W	YDL144C	Q07589	356 aa		13.14	□□□□□ -0.31
YCL074W	YCL074W	KRE5	P22023	1365 aa		13.14	□□□□□ -0.31
YCL074W	YCL074W	YML133C	Q03099	1374 aa		13.14	□□□□□ -0.31
YCL074W	YCL074W	YLL067C	Q07888	1374 aa		13.14	□□□□□ -0.31
YCL074W	YCL074W	YLL066C	Q99208	1374 aa		13.14	□□□□□ -0.31
YCL074W	YCL074W	YRB30	P53107	440 aa	Predicted RBP	13.12	□□□□□ -0.31
YCL074W	YCL074W	RVB2	Q12464	471 aa	Known RBP	13.12	□□□□□ -0.31
YCL074W	YCL074W	PSK1	P31374	1356 aa		13.11	□□□□□ -0.31
YCL074W	YCL074W	RIA1	P53893	1110 aa		13.1	□□□□□ -0.31
YCL074W	YCL074W	RCM1	P53972	490 aa		13.08	□□□□□ -0.32
YCL074W	YCL074W	FUN12	P39730	1002 aa	Known RBP	13.07	□□□□□ -0.32
YCL074W	YCL074W	FPR3	P38911	411 aa	Known RBP	13.06	□□□□□ -0.32
YCL074W	YCL074W	KAR2	P16474	682 aa	Known RBP	13.04	□□□□□ -0.32
YCL074W	YCL074W	PPH3	P32345	308 aa		13.03	□□□□□ -0.32
YCL074W	YCL074W	MPP10	P47083	593 aa	Known RBP	13.03	□□□□□ -0.32
YCL074W	YCL074W	TAP42	Q04372	366 aa		13.03	□□□□□ -0.32
YCL074W	YCL074W	PDI1	P17967	522 aa	Known RBP	13.02	□□□□□ -0.33
YCL074W	YCL074W	SUI2	P20459	304 aa	Known RBP	13.02	□□□□□ -0.33
YCL074W	YCL074W	RTR1	P40084	226 aa	Predicted RBP	13.01	□□□□□ -0.33
YCL074W	YCL074W	MAK10	Q02197	733 aa		13.01	□□□□□ -0.33
YCL074W	YCL074W	LEU2	P04173	364 aa	Predicted RBP	13	□□□□□ -0.33
YCL074W	YCL074W	RTF1	P53064	558 aa		12.98	□□□□□ -0.33
YCL074W	YCL074W	CPS1	P27614	576 aa		12.97	□□□□□ -0.33
YCL074W	YCL074W	MTR4	P47047	1073 aa	Known RBP	12.97	□□□□□ -0.33
YCL074W	YCL074W	RRP46	P53256	223 aa	Predicted RBP	12.97	□□□□□ -0.33
YCL074W	YCL074W	GRX4	P32642	244 aa		12.96	□□□□□ -0.33
YCL074W	YCL074W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	12.96	□□□□□ -0.33	not detected
YCL074W	YCL074W	USO1	P25386	1790 aa		12.95	□□□□□ -0.34
YCL074W	YCL074W	YNR029C	P53729	429 aa	Known RBP	12.95	□□□□□ -0.34
YCL074W	YCL074W	PAP2	P53632	584 aa	Known RBP	12.94	□□□□□ -0.34
YCL074W	YCL074W	TY1B-NL2	Q99337	1749 aa	Known RBP	12.93	□□□□□ -0.34
YCL074W	YCL074W	RPC31	P17890	251 aa		12.93	□□□□□ -0.34
YCL074W	YCL074W	SAP155	P43612	1002 aa		12.93	□□□□□ -0.34
YCL074W	YCL074W	HIM1	Q06674	414 aa		12.92	□□□□□ -0.34
YCL074W	YCL074W	PRD1	P25375	712 aa		12.91	□□□□□ -0.34
YCL074W	YCL074W	AUS1	Q08409	1394 aa		12.91	□□□□□ -0.34
YCL074W	YCL074W	RAD2	P07276	1031 aa		12.9	□□□□□ -0.34
YCL074W	YCL074W	TPD3	P31383	635 aa		12.88	□□□□□ -0.35
YCL074W	YCL074W	THI22	Q06490	572 aa		12.88	□□□□□ -0.35
YCL074W	YCL074W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	12.86	□□□□□ -0.35	not detected
YCL074W	YCL074W	RPO41	P13433	1351 aa	Known RBP	12.85	□□□□□ -0.35
YCL074W	YCL074W	ABP1	P15891	592 aa	Known RBP	12.85	□□□□□ -0.35
YCL074W	YCL074W	CSE4	P36012	229 aa		12.84	□□□□□ -0.35
YCL074W	YCL074W	PRP43	P53131	767 aa	Known RBP	12.84	□□□□□ -0.35
YCL074W	YCL074W	HEF3	P53978	1044 aa	Known RBP	12.84	□□□□□ -0.35
YCL074W	YCL074W	SIR4	P11978	1358 aa		12.83	□□□□□ -0.36
YCL074W	YCL074W	ADE6	P38972	1358 aa	Known RBP	12.83	□□□□□ -0.36
YCL074W	YCL074W	RPS24A	P0CX31	135 aa	Known RBP	12.82	□□□□□ -0.36
YCL074W	YCL074W	RPS24B	P0CX32	135 aa	Known RBP	12.82	□□□□□ -0.36
YCL074W	YCL074W	YIL092W	P40497	633 aa		12.81	□□□□□ -0.36
YCL074W	YCL074W	GAS4	Q08271	471 aa		12.81	□□□□□ -0.36
YCL074W	YCL074W	MAK21	Q12176	1025 aa	Known RBP	12.81	□□□□□ -0.36
YCL074W	YCL074W	RTT109	Q07794	436 aa		12.8	□□□□□ -0.36
YCL074W	YCL074W	DAL5	P15365	543 aa		12.79	□□□□□ -0.36
YCL074W	YCL074W	DPS1	P04802	557 aa	Known RBP	12.78	□□□□□ -0.36
YCL074W	YCL074W	APC1	P53886	1748 aa		12.77	□□□□□ -0.36
YCL074W	YCL074W	YRF1-4	O13559	1382 aa		12.77	□□□□□ -0.37
YCL074W	YCL074W	YMR196W	Q04336	1088 aa		12.75	□□□□□ -0.37
YCL074W	YCL074W	AKL1	P38080	1108 aa	Known RBP	12.74	□□□□□ -0.37
YCL074W	YCL074W	POL32	P47110	350 aa		12.74	□□□□□ -0.37
YCL074W	YCL074W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	12.73	□□□□□ -0.37	not detected
YCL074W	YCL074W	TY4B-H	P0C2J7	1802 aa		12.72	□□□□□ -0.37
YCL074W	YCL074W	TY4B-J	P47024	1803 aa		12.72	□□□□□ -0.37
YCL074W	YCL074W	YRF1-2	P40105	1681 aa		12.71	□□□□□ -0.37
YCL074W	YCL074W	IME2	P32581	645 aa		12.71	□□□□□ -0.37
YCL074W	YCL074W	OPY1	P38271	328 aa		12.71	□□□□□ -0.37
YCL074W	YCL074W	YIR014W	P40570	242 aa		12.7	□□□□□ -0.38
YCL074W	YCL074W	YNL050C	P53952	270 aa		12.69	□□□□□ -0.38
YCL074W	YCL074W	YFR016C	P43597	1233 aa	Known RBP	12.68	□□□□□ -0.38
YCL074W	YCL074W	GYP7	P48365	746 aa		12.68	□□□□□ -0.38
YCL074W	YCL074W	DSD1	P53095	428 aa		12.67	□□□□□ -0.38
YCL074W	YCL074W	PUF6	Q04373	656 aa	Known RBP	12.67	□□□□□ -0.38
YCL074W	YCL074W	RRP5	Q05022	1729 aa	Known RBP	12.66	□□□□□ -0.38
YCL074W	YCL074W	MAM1	P40065	302 aa		12.66	□□□□□ -0.38
YCL074W	YCL074W	ZDS1	P50111	915 aa	Known RBP	12.65	□□□□□ -0.38
YCL074W	YCL074W	EAF7	P53911	425 aa	Known RBP	12.65	□□□□□ -0.38
YCL074W	YCL074W	NTH2	P35172	780 aa		12.63	□□□□□ -0.39
YCL074W	YCL074W	RRT14	P40470	206 aa		12.63	□□□□□ -0.39
YCL074W	YCL074W	YIL177C	P40434	1758 aa		12.63	□□□□□ -0.39
YCL074W	YCL074W	YJL225C	P40889	1758 aa		12.63	□□□□□ -0.39
YCL074W	YCL074W	EDE1	P34216	1381 aa		12.62	□□□□□ -0.39
YCL074W	YCL074W	THI12	P42883	340 aa		12.62	□□□□□ -0.39
YCL074W	YCL074W	THI5	P43534	340 aa		12.62	□□□□□ -0.39
YCL074W	YCL074W	THI11	P47183	340 aa		12.62	□□□□□ -0.39
YCL074W	YCL074W	THI13	Q07748	340 aa		12.62	□□□□□ -0.39
YCL074W	YCL074W	TRP5	P00931	707 aa	Known RBP	12.6	□□□□□ -0.39
YCL074W	YCL074W	FKS3	Q04952	1785 aa		12.6	□□□□□ -0.39
YCL074W	YCL074W	HSP104	P31539	908 aa	Known RBP	12.59	□□□□□ -0.39
YCL074W	YCL074W	SRT1	Q03175	343 aa		12.59	□□□□□ -0.39
YCL074W	YCL074W	ECM16	Q04217	1267 aa	Known RBP	12.59	□□□□□ -0.39
YCL074W	YCL074W	CTF4	Q01454	927 aa		12.58	□□□□□ -0.4
YCL074W	YCL074W	AOS1	Q06624	347 aa		12.58	□□□□□ -0.4
YCL074W	YCL074W	URB1	P34241	1764 aa	Known RBP	12.57	□□□□□ -0.4
YCL074W	YCL074W	YPP1	P46951	817 aa		12.56	□□□□□ -0.4
YCL074W	YCL074W	CLC1	P17891	233 aa		12.55	□□□□□ -0.4

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms