RNA–Protein interactions for RNA: YCL034W

LSB5, Transcript of Protein of unknown function, yeastyeast

Gene LSB5, Length 1,065 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB5YCL034W THI12P42883 340 aa12.47□□□□□ -0.41
LSB5YCL034W THI5P43534 340 aa12.47□□□□□ -0.41
LSB5YCL034W THI11P47183 340 aa12.47□□□□□ -0.41
LSB5YCL034W THI13Q07748 340 aa12.47□□□□□ -0.41
LSB5YCL034W YNR029CP53729 429 aaKnown RBP12.46□□□□□ -0.41
LSB5YCL034W TAF8Q03750 510 aa12.44□□□□□ -0.42
LSB5YCL034W POL5P39985 1022 aaKnown RBP12.42□□□□□ -0.42
LSB5YCL034W KIP3P53086 805 aaKnown RBP12.42□□□□□ -0.42
LSB5YCL034W YLR419WQ06698 1435 aaKnown RBP12.4□□□□□ -0.42
LSB5YCL034W SPE2P21182 396 aa12.4□□□□□ -0.42
LSB5YCL034W MLP1Q02455 1875 aaKnown RBP12.36□□□□□ -0.43
LSB5YCL034W ORC1P54784 914 aaPredicted RBP12.31□□□□□ -0.44
LSB5YCL034W MHP1P43638 1398 aa12.3□□□□□ -0.44
LSB5YCL034W CPS1P27614 576 aa12.29□□□□□ -0.44
LSB5YCL034W PSK1P31374 1356 aa12.29□□□□□ -0.44
LSB5YCL034W RCM1P53972 490 aa12.28□□□□□ -0.44
LSB5YCL034W PTP3P40048 928 aa12.27□□□□□ -0.45
LSB5YCL034W CHZ1P40019 153 aaPredicted RBP12.26□□□□□ -0.45
LSB5YCL034W TY4B-HP0C2J7 1802 aa12.23□□□□□ -0.45
LSB5YCL034W TY4B-JP47024 1803 aa12.23□□□□□ -0.45
LSB5YCL034W PPH3P32345 308 aa12.22□□□□□ -0.45
LSB5YCL034W OXP1P28273 1286 aa12.2□□□□□ -0.46
LSB5YCL034W YKR023WP36119 530 aaKnown RBP12.2□□□□□ -0.46
LSB5YCL034W ADE6P38972 1358 aaKnown RBP12.18□□□□□ -0.46
LSB5YCL034W MRPL32P25348 183 aa12.18□□□□□ -0.46
LSB5YCL034W RRP5Q05022 1729 aaKnown RBP12.17□□□□□ -0.46
LSB5YCL034W MTR4P47047 1073 aaKnown RBP12.17□□□□□ -0.46
LSB5YCL034W LEU2P04173 364 aaPredicted RBP12.16□□□□□ -0.46
LSB5YCL034W FKH1P40466 484 aa12.15□□□□□ -0.46
LSB5YCL034W PDS5Q04264 1277 aa12.15□□□□□ -0.46
LSB5YCL034W SEC3P33332 1336 aaKnown RBP12.13□□□□□ -0.47
LSB5YCL034W YAH1Q12184 172 aaKnown RBP12.13□□□□□ -0.47
LSB5YCL034W SSP1P38871 571 aa12.12□□□□□ -0.47
LSB5YCL034W YML133CQ03099 1374 aa12.11□□□□□ -0.47
LSB5YCL034W YLL067CQ07888 1374 aa12.11□□□□□ -0.47
LSB5YCL034W YLL066CQ99208 1374 aa12.11□□□□□ -0.47
LSB5YCL034W PRP43P53131 767 aaKnown RBP12.11□□□□□ -0.47
LSB5YCL034W YRF1-2P40105 1681 aa12.1□□□□□ -0.47
LSB5YCL034W RTG3P38165 486 aa12.07□□□□□ -0.48
LSB5YCL034W PRP45P28004 379 aaPredicted RBP12.05□□□□□ -0.48
LSB5YCL034W CSE4P36012 229 aa12.05□□□□□ -0.48
LSB5YCL034W PDI1P17967 522 aaKnown RBP12.04□□□□□ -0.48
LSB5YCL034W PRP5P21372 849 aaPredicted RBP12.04□□□□□ -0.48
LSB5YCL034W RTF1P53064 558 aa12.04□□□□□ -0.48
LSB5YCL034W TAP42Q04372 366 aa12.02□□□□□ -0.49
LSB5YCL034W RPS24AP0CX31 135 aaKnown RBP12.01□□□□□ -0.49
LSB5YCL034W RPS24BP0CX32 135 aaKnown RBP12.01□□□□□ -0.49
LSB5YCL034W ENT1Q12518 454 aa12.01□□□□□ -0.49
LSB5YCL034W GRX4P32642 244 aa12□□□□□ -0.49
LSB5YCL034W YIL177CP40434 1758 aa12□□□□□ -0.49
LSB5YCL034W YJL225CP40889 1758 aa12□□□□□ -0.49
LSB5YCL034W FKS3Q04952 1785 aa12□□□□□ -0.49
LSB5YCL034W APP1P53933 587 aa11.99□□□□□ -0.49
LSB5YCL034W YCK3P39962 524 aa11.98□□□□□ -0.49
LSB5YCL034W YIL055CP40523 627 aaKnown RBP11.97□□□□□ -0.49
LSB5YCL034W ENV9Q08651 330 aa11.96□□□□□ -0.49
LSB5YCL034W URB1P34241 1764 aaKnown RBP11.96□□□□□ -0.49
LSB5YCL034W TFC8Q12308 588 aa11.95□□□□□ -0.5
LSB5YCL034W MSB3P48566 633 aaPredicted RBP11.94□□□□□ -0.5
LSB5YCL034W PSD2P53037 1138 aaKnown RBP11.94□□□□□ -0.5
LSB5YCL034W SLM3Q12093 417 aa11.94□□□□□ -0.5
LSB5YCL034W SPT7P35177 1332 aa11.93□□□□□ -0.5
LSB5YCL034W HOP09932 586 aa11.93□□□□□ -0.5
LSB5YCL034W KAR2P16474 682 aaKnown RBP11.93□□□□□ -0.5
LSB5YCL034W TCB1Q12466 1186 aa11.93□□□□□ -0.5
LSB5YCL034W DPS1P04802 557 aaKnown RBP11.92□□□□□ -0.5
LSB5YCL034W AUS1Q08409 1394 aa11.92□□□□□ -0.5
LSB5YCL034W APC1P53886 1748 aa11.91□□□□□ -0.5
LSB5YCL034W IMH1Q06704 911 aaKnown RBP11.91□□□□□ -0.5
LSB5YCL034W RSF2P46974 1380 aa11.91□□□□□ -0.5
LSB5YCL034W YRF1-3P0CX14 1859 aa11.9□□□□□ -0.5
LSB5YCL034W YRF1-7P0CX15 1859 aa11.9□□□□□ -0.5
LSB5YCL034W DMA1P38823 416 aa11.9□□□□□ -0.5
LSB5YCL034W YRF1-6P53819 1859 aa11.9□□□□□ -0.5
LSB5YCL034W YLR271WQ06152 274 aa11.9□□□□□ -0.5
LSB5YCL034W GAS4Q08271 471 aa11.9□□□□□ -0.5
LSB5YCL034W HAA1Q12753 694 aaKnown RBP11.89□□□□□ -0.51
LSB5YCL034W YEF3P16521 1044 aaKnown RBP11.88□□□□□ -0.51
LSB5YCL034W IOC4Q04213 475 aa11.88□□□□□ -0.51
LSB5YCL034W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.88□□□□□ -0.51not detected
LSB5YCL034W CDC27P38042 758 aa11.87□□□□□ -0.51
LSB5YCL034W RPO41P13433 1351 aaKnown RBP11.87□□□□□ -0.51
LSB5YCL034W NST1P53935 1240 aa11.86□□□□□ -0.51
LSB5YCL034W HIM1Q06674 414 aa11.86□□□□□ -0.51
LSB5YCL034W ENP1P38333 483 aaKnown RBP11.85□□□□□ -0.51
LSB5YCL034W IES2P40154 320 aa11.84□□□□□ -0.51
LSB5YCL034W SNF2P22082 1703 aa11.83□□□□□ -0.52
LSB5YCL034W DCD1P06773 312 aa11.83□□□□□ -0.52
LSB5YCL034W TRK1P12685 1235 aa11.83□□□□□ -0.52
LSB5YCL034W XKS1P42826 600 aa11.83□□□□□ -0.52
LSB5YCL034W ROM2P51862 1356 aaKnown RBP11.82□□□□□ -0.52
LSB5YCL034W LEU3P08638 886 aa11.82□□□□□ -0.52
LSB5YCL034W RSM7P47150 247 aa11.82□□□□□ -0.52
LSB5YCL034W PAP2P53632 584 aaKnown RBP11.81□□□□□ -0.52
LSB5YCL034W SIR4P11978 1358 aa11.8□□□□□ -0.52
LSB5YCL034W EDE1P34216 1381 aa11.77□□□□□ -0.53
LSB5YCL034W GLN1P32288 370 aaKnown RBP11.76□□□□□ -0.53
LSB5YCL034W MEC3Q02574 474 aa11.76□□□□□ -0.53
LSB5YCL034W YMR074CQ04773 145 aa11.76□□□□□ -0.53
LSB5YCL034W YKL133CP36066 463 aa11.74□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms