RNA–Protein interactions for RNA: YBR223W-A

YBR223W-A, Transcript of Dubious open reading frame, yeastyeast

Gene YBR223W-A, Length 120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR223W-AYBR223W-A RFS1P38234 210 aaKnown RBP-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TRS20P38334 175 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A RTS1P38903 757 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A VPS70P47161 811 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A NRD1P53617 575 aaKnown RBP RIP-Chip data-0.6□□□□□ -2.51not detected
YBR223W-AYBR223W-A NIS1P53939 407 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A YMR265CQ03508 461 aaKnown RBP-0.6□□□□□ -2.51
YBR223W-AYBR223W-A YDL176WQ12027 708 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A NUP192P47054 1683 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-DR6P0C2I3 1755 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-LR2P0C2I5 1755 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-LR3P0C2I6 1755 aaKnown RBP-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-PR3P0C2J1 1755 aaKnown RBP-0.6□□□□□ -2.51
YBR223W-AYBR223W-A PMD1P32634 1753 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A YIL177CP40434 1758 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-JR1P47098 1755 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-ML2Q03434 1755 aaKnown RBP-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-ER1Q03612 1755 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-OLQ12273 1755 aa-0.6□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-PLQ12414 1755 aaKnown RBP-0.6□□□□□ -2.51
YBR223W-AYBR223W-A CAT8P39113 1433 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A SEN2P16658 377 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A CDC11P32458 415 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A AFR1P33304 620 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A MAC1P35192 417 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A BOI1P38041 980 aaKnown RBP-0.61□□□□□ -2.51
YBR223W-AYBR223W-A RGA1P39083 1007 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A YFR006WP43590 535 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A FAA4P47912 694 aaKnown RBP-0.61□□□□□ -2.51
YBR223W-AYBR223W-A YMR210WQ03649 449 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A SSL1Q04673 461 aaPredicted RBP-0.61□□□□□ -2.51
YBR223W-AYBR223W-A GUD1Q07729 489 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A BNR1P40450 1375 aa-0.61□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-PR2P0C2J0 1756 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A FKS1P38631 1876 aaKnown RBP-0.62□□□□□ -2.51
YBR223W-AYBR223W-A UBR1P19812 1950 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A BNI1P41832 1953 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A YKL097CP34245 136 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A UTH1P36135 365 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A HXT5P38695 592 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A NMD3P38861 518 aaKnown RBP-0.62□□□□□ -2.51
YBR223W-AYBR223W-A MBP1P39678 833 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A TIF4631P39935 952 aaKnown RBP-0.62□□□□□ -2.51
YBR223W-AYBR223W-A FMP10P40098 244 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A NUP116Q02630 1113 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A PKH3Q03306 898 aaPredicted RBP-0.62□□□□□ -2.51
YBR223W-AYBR223W-A CST9Q06032 482 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A MCA1Q08601 432 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A YPL229WQ99395 206 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-PR1P0C2I9 1755 aaKnown RBP-0.62□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-JR2P47100 1755 aaKnown RBP-0.62□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-GR1Q12141 1755 aa-0.62□□□□□ -2.51
YBR223W-AYBR223W-A SGV1P23293 657 aaKnown RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A PAT1P25644 796 aaKnown RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A PEP7P32609 515 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A MIC60P36112 540 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A YJR120WP47157 116 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A OCA1P50946 238 aaPredicted RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A YPT32P51996 222 aaKnown RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A UBP10P53874 792 aaPredicted RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A ORC1P54784 914 aaPredicted RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A YVH1Q02256 364 aaKnown RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A ASM4Q05166 528 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A CDC73Q06697 393 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A SGO1Q08490 590 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A GEP3Q08622 556 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A YPR013CQ12145 317 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A APC11Q12157 165 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A PSH1Q12161 406 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A YDR215CQ12240 137 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-DR5P0C2I2 1755 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-ER2Q03619 1755 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-DR1Q03855 1755 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-MR2Q04670 1755 aaKnown RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-LR1Q12088 1755 aaKnown RBP-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-GR2Q12269 1755 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-GR3Q12316 1755 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-ORQ92393 1755 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-DR3Q99231 1755 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A ECM29P38737 1868 aa-0.63□□□□□ -2.51
YBR223W-AYBR223W-A HSL1P34244 1518 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A DNF2Q12675 1612 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-HO13535 1793 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A TY1B-BRQ12193 1756 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A CHD1P32657 1468 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A YMR084WA2P2R3 262 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A RPL40AP0CH08 128 aaKnown RBP-0.64□□□□□ -2.51
YBR223W-AYBR223W-A RPL40BP0CH09 128 aaKnown RBP-0.64□□□□□ -2.51
YBR223W-AYBR223W-A LSB5P25369 354 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A YDJ1P25491 409 aaKnown RBP-0.64□□□□□ -2.51
YBR223W-AYBR223W-A ECM25P32525 599 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A SPT21P35209 758 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A MIA40P36046 403 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A ALY1P36117 915 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A PAM1P37304 830 aaKnown RBP-0.64□□□□□ -2.51
YBR223W-AYBR223W-A MAL33P38157 468 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A SFB3P38810 929 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A PZF1P39933 429 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A UBP9P39967 754 aa-0.64□□□□□ -2.51
YBR223W-AYBR223W-A CST6P40535 587 aa-0.64□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms