RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W PKH3Q03306 898 aaPredicted RBP8.26□□□□□ -1.09
CKS1YBR135W PEX29Q03370 554 aa8.26□□□□□ -1.09
CKS1YBR135W RAD59Q12223 238 aa8.25□□□□□ -1.09
CKS1YBR135W YBL036CP38197 257 aa8.24□□□□□ -1.09
CKS1YBR135W ATG32P40458 529 aa8.24□□□□□ -1.09
CKS1YBR135W NMA111P53920 997 aa8.24□□□□□ -1.09
CKS1YBR135W YJU3P28321 313 aa8.23□□□□□ -1.09
CKS1YBR135W RTF1P53064 558 aa8.22□□□□□ -1.09
CKS1YBR135W BIO2P32451 375 aa8.21□□□□□ -1.1
CKS1YBR135W CSE4P36012 229 aa8.2□□□□□ -1.1
CKS1YBR135W XDJ1P39102 459 aa8.19□□□□□ -1.1
CKS1YBR135W YNL115CP53925 644 aa8.19□□□□□ -1.1
CKS1YBR135W SLY41P22215 453 aa8.18□□□□□ -1.1
CKS1YBR135W NUD1P32336 851 aa8.18□□□□□ -1.1
CKS1YBR135W TIF1P10081 395 aaKnown RBP8.17□□□□□ -1.1
CKS1YBR135W ARG8P18544 423 aa8.17□□□□□ -1.1
CKS1YBR135W VRP1P37370 817 aa8.17□□□□□ -1.1
CKS1YBR135W RSC30P38781 883 aa8.17□□□□□ -1.1
CKS1YBR135W RPL34BP40525 121 aaKnown RBP8.17□□□□□ -1.1
CKS1YBR135W LAM6Q08001 693 aa8.17□□□□□ -1.1
CKS1YBR135W HAP5Q02516 242 aa8.15□□□□□ -1.1
CKS1YBR135W PDR1P12383 1068 aa8.14□□□□□ -1.11
CKS1YBR135W KEX2P13134 814 aa8.14□□□□□ -1.11
CKS1YBR135W ARH1P48360 493 aa8.14□□□□□ -1.11
CKS1YBR135W ERG12P07277 443 aa8.13□□□□□ -1.11
CKS1YBR135W ERF2Q06551 359 aa8.13□□□□□ -1.11
CKS1YBR135W SPT5P27692 1063 aaKnown RBP8.12□□□□□ -1.11
CKS1YBR135W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
CKS1YBR135W YDR344CQ05510 147 aa8.12□□□□□ -1.11
CKS1YBR135W MAK16P10962 306 aaPredicted RBP8.11□□□□□ -1.11
CKS1YBR135W SUP45P12385 437 aaKnown RBP8.11□□□□□ -1.11
CKS1YBR135W TRM1P15565 570 aaKnown RBP8.11□□□□□ -1.11
CKS1YBR135W STR2P47164 639 aa8.11□□□□□ -1.11
CKS1YBR135W YNL108CP53929 270 aa8.11□□□□□ -1.11
CKS1YBR135W SUB2Q07478 446 aaKnown RBP8.11□□□□□ -1.11
CKS1YBR135W NPL4P33755 580 aa8.1□□□□□ -1.11
CKS1YBR135W ISM1P48526 1002 aa8.1□□□□□ -1.11
CKS1YBR135W PUS6P53294 404 aa8.09□□□□□ -1.11
CKS1YBR135W YPR204WQ08995 1032 aa8.09□□□□□ -1.11
CKS1YBR135W RTG2P32608 588 aaKnown RBP8.08□□□□□ -1.12
CKS1YBR135W BNI4P53858 892 aa8.08□□□□□ -1.12
CKS1YBR135W ELP4Q02884 456 aaKnown RBP8.08□□□□□ -1.12
CKS1YBR135W DPS1P04802 557 aaKnown RBP8.07□□□□□ -1.12
CKS1YBR135W SSA4P22202 642 aaKnown RBP8.07□□□□□ -1.12
CKS1YBR135W SSA1P10591 642 aaKnown RBP8.06□□□□□ -1.12
CKS1YBR135W RAM1P22007 431 aa8.06□□□□□ -1.12
CKS1YBR135W TTI1P36097 1038 aa8.06□□□□□ -1.12
CKS1YBR135W TY1A-DR4O74302 440 aa8.05□□□□□ -1.12
CKS1YBR135W ENO2P00925 437 aaKnown RBP8.05□□□□□ -1.12
CKS1YBR135W TY1A-HP0C2I4 478 aaKnown RBP8.05□□□□□ -1.12
CKS1YBR135W TY1A-AP0CX57 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-PR1P0CX58 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-ORP0CX59 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-PR2P0CX60 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-DR5P0CX65 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-ER2P0CX66 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-GR3P0CX67 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-LR1P0CX68 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-MR2P0CX69 440 aa8.05□□□□□ -1.12
CKS1YBR135W YDJ1P25491 409 aaKnown RBP8.05□□□□□ -1.12
CKS1YBR135W TY1A-JR2P47099 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-DR1Q03856 440 aa8.05□□□□□ -1.12
CKS1YBR135W AGE1Q04412 482 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-ML1Q04706 440 aaKnown RBP8.05□□□□□ -1.12
CKS1YBR135W TY1A-BRQ12217 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-NL2Q12470 440 aa8.05□□□□□ -1.12
CKS1YBR135W TY1A-GR2Q12485 440 aa8.05□□□□□ -1.12
CKS1YBR135W NAF1P53919 492 aaKnown RBP8.04□□□□□ -1.12
CKS1YBR135W TBF1Q02457 562 aa8.04□□□□□ -1.12
CKS1YBR135W SEC2P17065 759 aa8.02□□□□□ -1.13
CKS1YBR135W CPS1P27614 576 aa8.02□□□□□ -1.13
CKS1YBR135W GCD11P32481 527 aaKnown RBP8.02□□□□□ -1.13
CKS1YBR135W SPT23P35210 1082 aa8.02□□□□□ -1.13
CKS1YBR135W GEF1P37020 779 aa8.02□□□□□ -1.13
CKS1YBR135W RIM21P48565 533 aa8.02□□□□□ -1.13
CKS1YBR135W TUB4P53378 473 aa8.02□□□□□ -1.13
CKS1YBR135W BUD20Q08004 166 aaPredicted RBP8.02□□□□□ -1.13
CKS1YBR135W ENO1P00924 437 aaKnown RBP8.01□□□□□ -1.13
CKS1YBR135W MRX10Q05648 414 aa8.01□□□□□ -1.13
CKS1YBR135W YDL206WQ12424 762 aa8□□□□□ -1.13
CKS1YBR135W YPR015CQ12531 247 aa8□□□□□ -1.13
CKS1YBR135W SIS2P36024 562 aa7.99□□□□□ -1.13
CKS1YBR135W PTC2P39966 464 aaKnown RBP7.99□□□□□ -1.13
CKS1YBR135W YPP1P46951 817 aa7.98□□□□□ -1.13
CKS1YBR135W RPA14P50106 137 aa7.98□□□□□ -1.13
CKS1YBR135W MCM16Q12262 181 aa7.97□□□□□ -1.13
CKS1YBR135W YML082WQ04533 649 aaKnown RBP7.96□□□□□ -1.14
CKS1YBR135W RGA2Q06407 1009 aa7.96□□□□□ -1.14
CKS1YBR135W PRT1P06103 763 aaKnown RBP7.95□□□□□ -1.14
CKS1YBR135W YPR097WQ06839 1073 aa7.95□□□□□ -1.14
CKS1YBR135W NOB1Q08444 459 aaKnown RBP7.95□□□□□ -1.14
CKS1YBR135W PAC1P39946 494 aaKnown RBP7.94□□□□□ -1.14
CKS1YBR135W ALR1Q08269 859 aa7.93□□□□□ -1.14
CKS1YBR135W PDC1P06169 563 aaKnown RBP7.92□□□□□ -1.14
CKS1YBR135W RDS2P19541 446 aaKnown RBP7.92□□□□□ -1.14
CKS1YBR135W PUP1P25043 261 aa7.92□□□□□ -1.14
CKS1YBR135W PEP12P32854 288 aa7.92□□□□□ -1.14
CKS1YBR135W RRN7P40992 514 aa7.91□□□□□ -1.14
CKS1YBR135W TEC1P18412 486 aa7.9□□□□□ -1.14
CKS1YBR135W FIG4P42837 879 aa7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms