RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W IML1P47170 1584 aa8.87□□□□□ -0.99
TOD6YBL054W BNR1P40450 1375 aa8.87□□□□□ -0.99
TOD6YBL054W IOC4Q04213 475 aa8.87□□□□□ -0.99
TOD6YBL054W RTG3P38165 486 aa8.86□□□□□ -0.99
TOD6YBL054W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
TOD6YBL054W YRF1-1P0CX20 1796 aa8.85□□□□□ -0.99
TOD6YBL054W YRF1-5P0CX21 1796 aa8.85□□□□□ -0.99
TOD6YBL054W YRF1-8P0CX22 1796 aa8.85□□□□□ -0.99
TOD6YBL054W SPE2P21182 396 aa8.84□□□□□ -0.99
TOD6YBL054W HAP1P0CE41 1502 aa8.84□□□□□ -0.99
TOD6YBL054W EDE1P34216 1381 aa8.84□□□□□ -1
TOD6YBL054W TRK1P12685 1235 aa8.83□□□□□ -1
TOD6YBL054W VPS24P36095 224 aaKnown RBP8.83□□□□□ -1
TOD6YBL054W MPP10P47083 593 aaKnown RBP8.83□□□□□ -1
TOD6YBL054W SIS2P36024 562 aa8.82□□□□□ -1
TOD6YBL054W RAD2P07276 1031 aa8.82□□□□□ -1
TOD6YBL054W YEF3P16521 1044 aaKnown RBP8.81□□□□□ -1
TOD6YBL054W MSP1P28737 362 aa8.81□□□□□ -1
TOD6YBL054W NUP188P52593 1655 aaKnown RBP8.8□□□□□ -1
TOD6YBL054W TRM3Q07527 1436 aa8.79□□□□□ -1
TOD6YBL054W SEC7P11075 2009 aaKnown RBP8.79□□□□□ -1
TOD6YBL054W QCR6P00127 147 aa8.78□□□□□ -1
TOD6YBL054W NOT3P06102 836 aaKnown RBP8.78□□□□□ -1
TOD6YBL054W FKH1P40466 484 aa8.78□□□□□ -1
TOD6YBL054W ARL1P38116 183 aaKnown RBP8.76□□□□□ -1.01
TOD6YBL054W LSP1Q12230 341 aaKnown RBP8.76□□□□□ -1.01
TOD6YBL054W DAL5P15365 543 aa8.75□□□□□ -1.01
TOD6YBL054W BUD27P43573 796 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
TOD6YBL054W CTR9P89105 1077 aa8.75□□□□□ -1.01
TOD6YBL054W RTR1P40084 226 aaPredicted RBP8.74□□□□□ -1.01
TOD6YBL054W YIL092WP40497 633 aa8.74□□□□□ -1.01
TOD6YBL054W SAP155P43612 1002 aa8.74□□□□□ -1.01
TOD6YBL054W POL32P47110 350 aa8.74□□□□□ -1.01
TOD6YBL054W AIM44Q99299 758 aa8.74□□□□□ -1.01
TOD6YBL054W KRE5P22023 1365 aa8.73□□□□□ -1.01
TOD6YBL054W KNS1P32350 737 aaPredicted RBP8.73□□□□□ -1.01
TOD6YBL054W YAP3P38749 330 aa8.73□□□□□ -1.01
TOD6YBL054W CHZ1P40019 153 aaPredicted RBP8.73□□□□□ -1.01
TOD6YBL054W DNF3Q12674 1656 aa8.72□□□□□ -1.01
TOD6YBL054W RLF2Q12495 606 aa8.72□□□□□ -1.01
TOD6YBL054W RRP46P53256 223 aaPredicted RBP8.71□□□□□ -1.02
TOD6YBL054W MET5P47169 1442 aa8.71□□□□□ -1.02
TOD6YBL054W YPP1P46951 817 aa8.7□□□□□ -1.02
TOD6YBL054W TEA1P47988 759 aa8.7□□□□□ -1.02
TOD6YBL054W TAF8Q03750 510 aa8.7□□□□□ -1.02
TOD6YBL054W TPD3P31383 635 aa8.69□□□□□ -1.02
TOD6YBL054W NOP58Q12499 511 aaKnown RBP8.69□□□□□ -1.02
TOD6YBL054W ITC1P53125 1264 aa8.68□□□□□ -1.02
TOD6YBL054W YML133CQ03099 1374 aa8.68□□□□□ -1.02
TOD6YBL054W YLL067CQ07888 1374 aa8.68□□□□□ -1.02
TOD6YBL054W YLL066CQ99208 1374 aa8.68□□□□□ -1.02
TOD6YBL054W BCK1Q01389 1478 aa8.68□□□□□ -1.02
TOD6YBL054W YRF1-4O13559 1382 aa8.67□□□□□ -1.02
TOD6YBL054W SIR4P11978 1358 aa8.67□□□□□ -1.02
TOD6YBL054W THI22Q06490 572 aa8.67□□□□□ -1.02
TOD6YBL054W PUF6Q04373 656 aaKnown RBP8.66□□□□□ -1.02
TOD6YBL054W HEF3P53978 1044 aaKnown RBP8.65□□□□□ -1.02
TOD6YBL054W PRD1P25375 712 aa8.65□□□□□ -1.03
TOD6YBL054W RAD9P14737 1309 aa8.64□□□□□ -1.03
TOD6YBL054W SRS2P12954 1174 aa8.64□□□□□ -1.03
TOD6YBL054W MAK21Q12176 1025 aaKnown RBP8.64□□□□□ -1.03
TOD6YBL054W KAR2P16474 682 aaKnown RBP8.63□□□□□ -1.03
TOD6YBL054W NAP1P25293 417 aaKnown RBP8.63□□□□□ -1.03
TOD6YBL054W CSE4P36012 229 aa8.62□□□□□ -1.03
TOD6YBL054W COG8Q04632 607 aa8.62□□□□□ -1.03
TOD6YBL054W YGR130CP53278 816 aa8.61□□□□□ -1.03
TOD6YBL054W LCD1Q04377 747 aa8.61□□□□□ -1.03
TOD6YBL054W HAP5Q02516 242 aa8.61□□□□□ -1.03
TOD6YBL054W RTT109Q07794 436 aa8.61□□□□□ -1.03
TOD6YBL054W ALD4P46367 519 aaKnown RBP8.6□□□□□ -1.03
TOD6YBL054W RSC1P53236 928 aa8.6□□□□□ -1.03
TOD6YBL054W PIL1P53252 339 aaKnown RBP8.59□□□□□ -1.03
TOD6YBL054W PAP2P53632 584 aaKnown RBP8.58□□□□□ -1.04
TOD6YBL054W ECM16Q04217 1267 aaKnown RBP8.58□□□□□ -1.04
TOD6YBL054W ROM2P51862 1356 aaKnown RBP8.57□□□□□ -1.04
TOD6YBL054W TRP5P00931 707 aaKnown RBP8.56□□□□□ -1.04
TOD6YBL054W RKM3P38222 552 aa8.56□□□□□ -1.04
TOD6YBL054W ESC2Q06340 456 aa8.56□□□□□ -1.04
TOD6YBL054W RAD50P12753 1312 aa8.56□□□□□ -1.04
TOD6YBL054W NUP145P49687 1317 aa8.56□□□□□ -1.04
TOD6YBL054W DLD1P32891 587 aa8.55□□□□□ -1.04
TOD6YBL054W CAB1Q04430 367 aa8.55□□□□□ -1.04
TOD6YBL054W TYS1P36421 394 aaKnown RBP8.54□□□□□ -1.04
TOD6YBL054W TPM2P40414 161 aa8.54□□□□□ -1.04
TOD6YBL054W PSK1P31374 1356 aa8.53□□□□□ -1.04
TOD6YBL054W RRT14P40470 206 aa8.53□□□□□ -1.04
TOD6YBL054W MDG1P53885 366 aa8.53□□□□□ -1.04
TOD6YBL054W TAP42Q04372 366 aa8.53□□□□□ -1.04
TOD6YBL054W NKP2Q06162 153 aa8.53□□□□□ -1.04
TOD6YBL054W USO1P25386 1790 aa8.53□□□□□ -1.04
TOD6YBL054W MCM2P29469 868 aa8.52□□□□□ -1.04
TOD6YBL054W ILV3P39522 585 aaKnown RBP8.52□□□□□ -1.04
TOD6YBL054W RPN1P38764 993 aaKnown RBP8.52□□□□□ -1.05
TOD6YBL054W BDH2P39713 417 aa8.52□□□□□ -1.05
TOD6YBL054W NPA3P47122 385 aa8.52□□□□□ -1.05
TOD6YBL054W HIM1Q06674 414 aa8.52□□□□□ -1.05
TOD6YBL054W AUS1Q08409 1394 aa8.51□□□□□ -1.05
TOD6YBL054W PDI1P17967 522 aaKnown RBP8.51□□□□□ -1.05
TOD6YBL054W RPN12P32496 274 aa8.51□□□□□ -1.05
TOD6YBL054W RVS167P39743 482 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 84.2 ms