RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W PEX21P50091 288 aa8.67□□□□□ -1.02
PRE7YBL041W TFB4Q12004 338 aa8.67□□□□□ -1.02
PRE7YBL041W BUD20Q08004 166 aaPredicted RBP8.66□□□□□ -1.02
PRE7YBL041W RPO31P04051 1460 aa8.65□□□□□ -1.02
PRE7YBL041W TUM1Q08686 304 aaKnown RBP8.65□□□□□ -1.02
PRE7YBL041W MAK21Q12176 1025 aaKnown RBP8.65□□□□□ -1.02
PRE7YBL041W ISM1P48526 1002 aa8.64□□□□□ -1.03
PRE7YBL041W NUD1P32336 851 aa8.63□□□□□ -1.03
PRE7YBL041W AMS1P22855 1083 aa8.62□□□□□ -1.03
PRE7YBL041W SAS4Q04003 481 aa8.61□□□□□ -1.03
PRE7YBL041W MVP1P40959 511 aaKnown RBP8.6□□□□□ -1.03
PRE7YBL041W CDC25P04821 1589 aa8.58□□□□□ -1.04
PRE7YBL041W PRT1P06103 763 aaKnown RBP8.58□□□□□ -1.04
PRE7YBL041W DMA1P38823 416 aa8.58□□□□□ -1.04
PRE7YBL041W TY2B-LR1P0C2J3 1770 aa8.58□□□□□ -1.04
PRE7YBL041W TY2B-FP0CX63 1770 aa8.58□□□□□ -1.04
PRE7YBL041W TY2B-GR2P0CX64 1770 aa8.58□□□□□ -1.04
PRE7YBL041W TY2B-CP25384 1770 aa8.58□□□□□ -1.04
PRE7YBL041W TY2B-DR2Q03494 1770 aa8.58□□□□□ -1.04
PRE7YBL041W TY1B-DR1Q03855 1755 aa8.58□□□□□ -1.04
PRE7YBL041W TY2B-DR3Q07791 1770 aaKnown RBP8.58□□□□□ -1.04
PRE7YBL041W TY2B-OR1Q12113 1770 aa8.58□□□□□ -1.04
PRE7YBL041W TY2B-DR1Q12472 1770 aa8.58□□□□□ -1.04
PRE7YBL041W TY2B-OR2Q12501 1770 aa8.58□□□□□ -1.04
PRE7YBL041W CHD1P32657 1468 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-DR4O74302 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-HP0C2I4 478 aaKnown RBP8.57□□□□□ -1.04
PRE7YBL041W TY1A-AP0CX57 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-PR1P0CX58 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-ORP0CX59 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-PR2P0CX60 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-DR5P0CX65 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-ER2P0CX66 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-GR3P0CX67 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-LR1P0CX68 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-MR2P0CX69 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-JR2P47099 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-DR1Q03856 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-ML1Q04706 440 aaKnown RBP8.57□□□□□ -1.04
PRE7YBL041W TY1A-BRQ12217 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-NL2Q12470 440 aa8.57□□□□□ -1.04
PRE7YBL041W TY1A-GR2Q12485 440 aa8.57□□□□□ -1.04
PRE7YBL041W RGR1P19263 1082 aa8.56□□□□□ -1.04
PRE7YBL041W PBS2P08018 668 aa8.55□□□□□ -1.04
PRE7YBL041W CKB1P43639 278 aa8.54□□□□□ -1.04
PRE7YBL041W TY1B-BRQ12193 1756 aa8.53□□□□□ -1.04
PRE7YBL041W TY1B-GR3Q12316 1755 aa8.53□□□□□ -1.04
PRE7YBL041W TY1B-ORQ92393 1755 aa8.53□□□□□ -1.04
PRE7YBL041W SEC2P17065 759 aa8.53□□□□□ -1.04
PRE7YBL041W YPR109WQ06104 294 aa8.53□□□□□ -1.04
PRE7YBL041W SAS10Q12136 610 aaPredicted RBP8.52□□□□□ -1.05
PRE7YBL041W TOP2P06786 1428 aaKnown RBP8.52□□□□□ -1.05
PRE7YBL041W ESC1Q03661 1658 aaKnown RBP8.51□□□□□ -1.05
PRE7YBL041W MET5P47169 1442 aa8.51□□□□□ -1.05
PRE7YBL041W DNF1P32660 1571 aa8.51□□□□□ -1.05
PRE7YBL041W YEL077CQ3E7X8 1277 aa8.5□□□□□ -1.05
PRE7YBL041W PAN1P32521 1480 aa8.5□□□□□ -1.05
PRE7YBL041W NPL4P33755 580 aa8.48□□□□□ -1.05
PRE7YBL041W TY2B-BQ12491 1770 aa8.48□□□□□ -1.05
PRE7YBL041W RKR1Q04781 1562 aa8.48□□□□□ -1.05
PRE7YBL041W POL1P13382 1468 aa8.47□□□□□ -1.05
PRE7YBL041W MRF1P30775 413 aaPredicted RBP8.47□□□□□ -1.05
PRE7YBL041W GCD11P32481 527 aaKnown RBP8.47□□□□□ -1.05
PRE7YBL041W TY1B-HO13535 1793 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-DR5P0C2I2 1755 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-DR6P0C2I3 1755 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-LR2P0C2I5 1755 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-LR3P0C2I6 1755 aaKnown RBP8.46□□□□□ -1.05
PRE7YBL041W TY1B-PR1P0C2I9 1755 aaKnown RBP8.46□□□□□ -1.05
PRE7YBL041W TY1B-PR2P0C2J0 1756 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-PR3P0C2J1 1755 aaKnown RBP8.46□□□□□ -1.05
PRE7YBL041W TY1B-JR1P47098 1755 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-ML2Q03434 1755 aaKnown RBP8.46□□□□□ -1.05
PRE7YBL041W TY1B-ER1Q03612 1755 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-ML1Q04711 1755 aaKnown RBP8.46□□□□□ -1.05
PRE7YBL041W TY1B-GR2Q12269 1755 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-OLQ12273 1755 aa8.46□□□□□ -1.05
PRE7YBL041W TY1B-PLQ12414 1755 aaKnown RBP8.46□□□□□ -1.05
PRE7YBL041W TY1B-DR3Q99231 1755 aa8.46□□□□□ -1.05
PRE7YBL041W CST6P40535 587 aa8.46□□□□□ -1.06
PRE7YBL041W TRK1P12685 1235 aa8.45□□□□□ -1.06
PRE7YBL041W ERF2Q06551 359 aa8.45□□□□□ -1.06
PRE7YBL041W RQC2Q12532 1038 aaKnown RBP8.45□□□□□ -1.06
PRE7YBL041W MAM3Q12296 706 aa8.44□□□□□ -1.06
PRE7YBL041W RPA190P10964 1664 aaKnown RBP8.43□□□□□ -1.06
PRE7YBL041W KEX2P13134 814 aa8.43□□□□□ -1.06
PRE7YBL041W PSE1P32337 1089 aaKnown RBP8.43□□□□□ -1.06
PRE7YBL041W DSF2P38213 736 aa8.43□□□□□ -1.06
PRE7YBL041W IES2P40154 320 aa8.43□□□□□ -1.06
PRE7YBL041W MMS22Q06164 1454 aa8.42□□□□□ -1.06
PRE7YBL041W ERG12P07277 443 aa8.41□□□□□ -1.06
PRE7YBL041W RRN7P40992 514 aa8.41□□□□□ -1.06
PRE7YBL041W CLA4P48562 842 aa8.41□□□□□ -1.06
PRE7YBL041W LTE1P07866 1435 aa8.4□□□□□ -1.06
PRE7YBL041W SMC4Q12267 1418 aa8.4□□□□□ -1.06
PRE7YBL041W LAM6Q08001 693 aa8.4□□□□□ -1.06
PRE7YBL041W YOR1P53049 1477 aa8.39□□□□□ -1.07
PRE7YBL041W SPT16P32558 1035 aaKnown RBP8.39□□□□□ -1.07
PRE7YBL041W AIR1P40507 360 aaKnown RBP8.38□□□□□ -1.07
PRE7YBL041W STU1P38198 1513 aa8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms