RNA–Protein interactions for RNA: RDN25-1

RDN25-1, Transcript of 25S ribosomal RNA (25S rRNA), yeastyeast

Gene RDN25-1, Length 3,396 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN25-1RDN25-1 SWE1P32944 819 aa11.86□□□□□ -0.51
RDN25-1RDN25-1 VPS27P40343 622 aaKnown RBP11.85□□□□□ -0.51
RDN25-1RDN25-1 YOR093CQ12275 1648 aa11.85□□□□□ -0.51
RDN25-1RDN25-1 NUG1P40010 520 aaKnown RBP11.84□□□□□ -0.51
RDN25-1RDN25-1 CDC45Q08032 650 aa11.84□□□□□ -0.51
RDN25-1RDN25-1 CHZ1P40019 153 aaPredicted RBP11.84□□□□□ -0.51
RDN25-1RDN25-1 NAP1P25293 417 aaKnown RBP11.83□□□□□ -0.52
RDN25-1RDN25-1 MPP10P47083 593 aaKnown RBP11.83□□□□□ -0.52
RDN25-1RDN25-1 PDR5P33302 1511 aaKnown RBP11.83□□□□□ -0.52
RDN25-1RDN25-1 TAF8Q03750 510 aa11.82□□□□□ -0.52
RDN25-1RDN25-1 DJP1P40564 432 aa11.81□□□□□ -0.52
RDN25-1RDN25-1 SUI2P20459 304 aaKnown RBP11.8□□□□□ -0.52
RDN25-1RDN25-1 YAP3P38749 330 aa11.8□□□□□ -0.52
RDN25-1RDN25-1 SNF7P39929 240 aaKnown RBP11.79□□□□□ -0.52
RDN25-1RDN25-1 RAD26P40352 1085 aa11.78□□□□□ -0.52
RDN25-1RDN25-1 TYS1P36421 394 aaKnown RBP11.78□□□□□ -0.52
RDN25-1RDN25-1 YEF3P16521 1044 aaKnown RBP11.77□□□□□ -0.53
RDN25-1RDN25-1 NOP53Q12080 455 aaKnown RBP11.75□□□□□ -0.53
RDN25-1RDN25-1 YPP1P46951 817 aa11.74□□□□□ -0.53
RDN25-1RDN25-1 SEC7P11075 2009 aaKnown RBP11.74□□□□□ -0.53
RDN25-1RDN25-1 CTR9P89105 1077 aa11.73□□□□□ -0.53
RDN25-1RDN25-1 SPT2P06843 333 aaPredicted RBP11.72□□□□□ -0.53
RDN25-1RDN25-1 VMR1P38735 1592 aa11.72□□□□□ -0.53
RDN25-1RDN25-1 DAL5P15365 543 aa11.71□□□□□ -0.53
RDN25-1RDN25-1 YRB30P53107 440 aaPredicted RBP11.71□□□□□ -0.53
RDN25-1RDN25-1 RAD9P14737 1309 aa11.71□□□□□ -0.53
RDN25-1RDN25-1 CHC1P22137 1653 aaKnown RBP11.71□□□□□ -0.53
RDN25-1RDN25-1 CAB1Q04430 367 aa11.7□□□□□ -0.54
RDN25-1RDN25-1 DOP1Q03921 1698 aa11.7□□□□□ -0.54
RDN25-1RDN25-1 RPP0P05317 312 aaKnown RBP11.69□□□□□ -0.54
RDN25-1RDN25-1 ROX1P25042 368 aa11.69□□□□□ -0.54
RDN25-1RDN25-1 FKH1P40466 484 aa11.68□□□□□ -0.54
RDN25-1RDN25-1 NUP192P47054 1683 aa11.68□□□□□ -0.54
RDN25-1RDN25-1 RTR1P40084 226 aaPredicted RBP11.67□□□□□ -0.54
RDN25-1RDN25-1 MLP1Q02455 1875 aaKnown RBP11.67□□□□□ -0.54
RDN25-1RDN25-1 SLN1P39928 1220 aaPredicted RBP11.66□□□□□ -0.54
RDN25-1RDN25-1 RRP46P53256 223 aaPredicted RBP11.66□□□□□ -0.54
RDN25-1RDN25-1 CSE4P36012 229 aa11.66□□□□□ -0.54
RDN25-1RDN25-1 DOS2P54858 310 aa11.66□□□□□ -0.54
RDN25-1RDN25-1 IML1P47170 1584 aa11.66□□□□□ -0.54
RDN25-1RDN25-1 TPD3P31383 635 aa11.65□□□□□ -0.54
RDN25-1RDN25-1 RLF2Q12495 606 aa11.64□□□□□ -0.55
RDN25-1RDN25-1 SAP155P43612 1002 aa11.64□□□□□ -0.55
RDN25-1RDN25-1 PAP2P53632 584 aaKnown RBP11.62□□□□□ -0.55
RDN25-1RDN25-1 NOP58Q12499 511 aaKnown RBP11.62□□□□□ -0.55
RDN25-1RDN25-1 CLB5P30283 435 aa11.62□□□□□ -0.55
RDN25-1RDN25-1 ALD4P46367 519 aaKnown RBP11.62□□□□□ -0.55
RDN25-1RDN25-1 RAD2P07276 1031 aa11.61□□□□□ -0.55
RDN25-1RDN25-1 MET5P47169 1442 aa11.6□□□□□ -0.55
RDN25-1RDN25-1 IPL1P38991 367 aa11.59□□□□□ -0.55
RDN25-1RDN25-1 NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.59□□□□□ -0.55not detected
RDN25-1RDN25-1 SPC110P32380 944 aa11.58□□□□□ -0.56
RDN25-1RDN25-1 KAR2P16474 682 aaKnown RBP11.57□□□□□ -0.56
RDN25-1RDN25-1 RLP24Q07915 199 aaKnown RBP11.57□□□□□ -0.56
RDN25-1RDN25-1 PCT1P13259 424 aa11.56□□□□□ -0.56
RDN25-1RDN25-1 THI22Q06490 572 aa11.56□□□□□ -0.56
RDN25-1RDN25-1 PUF6Q04373 656 aaKnown RBP11.56□□□□□ -0.56
RDN25-1RDN25-1 POL32P47110 350 aa11.56□□□□□ -0.56
RDN25-1RDN25-1 HIM1Q06674 414 aa11.56□□□□□ -0.56
RDN25-1RDN25-1 DNF2Q12675 1612 aa11.55□□□□□ -0.56
RDN25-1RDN25-1 RCM1P53972 490 aa11.55□□□□□ -0.56
RDN25-1RDN25-1 YIL092WP40497 633 aa11.54□□□□□ -0.56
RDN25-1RDN25-1 NUP188P52593 1655 aaKnown RBP11.53□□□□□ -0.56
RDN25-1RDN25-1 SCT1P32784 759 aa11.53□□□□□ -0.56
RDN25-1RDN25-1 GRX3Q03835 250 aa11.53□□□□□ -0.56
RDN25-1RDN25-1 YML133CQ03099 1374 aa11.53□□□□□ -0.56
RDN25-1RDN25-1 YLL067CQ07888 1374 aa11.53□□□□□ -0.56
RDN25-1RDN25-1 YLL066CQ99208 1374 aa11.53□□□□□ -0.56
RDN25-1RDN25-1 ABP1P15891 592 aaKnown RBP11.52□□□□□ -0.57
RDN25-1RDN25-1 PRD1P25375 712 aa11.52□□□□□ -0.57
RDN25-1RDN25-1 NMD2P38798 1089 aaKnown RBP11.52□□□□□ -0.57
RDN25-1RDN25-1 RTT109Q07794 436 aa11.51□□□□□ -0.57
RDN25-1RDN25-1 MSH3P25336 1018 aa11.51□□□□□ -0.57
RDN25-1RDN25-1 PPH3P32345 308 aa11.49□□□□□ -0.57
RDN25-1RDN25-1 DSN1P40568 576 aa11.48□□□□□ -0.57
RDN25-1RDN25-1 YIR014WP40570 242 aa11.48□□□□□ -0.57
RDN25-1RDN25-1 SPB4P25808 606 aaPredicted RBP11.47□□□□□ -0.57
RDN25-1RDN25-1 SMC3P47037 1230 aa11.47□□□□□ -0.57
RDN25-1RDN25-1 RIX1P38883 763 aaPredicted RBP11.46□□□□□ -0.57
RDN25-1RDN25-1 IOC4Q04213 475 aa11.46□□□□□ -0.57
RDN25-1RDN25-1 KRE5P22023 1365 aa11.46□□□□□ -0.58
RDN25-1RDN25-1 HEF3P53978 1044 aaKnown RBP11.46□□□□□ -0.58
RDN25-1RDN25-1 BCK1Q01389 1478 aa11.45□□□□□ -0.58
RDN25-1RDN25-1 ETT1Q08421 412 aaKnown RBP11.45□□□□□ -0.58
RDN25-1RDN25-1 KNS1P32350 737 aaPredicted RBP11.44□□□□□ -0.58
RDN25-1RDN25-1 SNF2P22082 1703 aa11.44□□□□□ -0.58
RDN25-1RDN25-1 ARL1P38116 183 aaKnown RBP11.44□□□□□ -0.58
RDN25-1RDN25-1 YGL081WP53156 320 aa11.44□□□□□ -0.58
RDN25-1RDN25-1 YNL011CP53980 444 aa11.44□□□□□ -0.58
RDN25-1RDN25-1 YBR287WP38355 427 aa11.44□□□□□ -0.58
RDN25-1RDN25-1 GAS4Q08271 471 aa11.44□□□□□ -0.58
RDN25-1RDN25-1 ILV3P39522 585 aaKnown RBP11.43□□□□□ -0.58
RDN25-1RDN25-1 MRX12P47084 519 aa11.42□□□□□ -0.58
RDN25-1RDN25-1 BUB1P41695 1021 aaKnown RBP RIP-Chip data11.42□□□□□ -0.58not detected
RDN25-1RDN25-1 RIA1P53893 1110 aa11.41□□□□□ -0.58
RDN25-1RDN25-1 ECM16Q04217 1267 aaKnown RBP11.41□□□□□ -0.58
RDN25-1RDN25-1 VPS24P36095 224 aaKnown RBP11.41□□□□□ -0.58
RDN25-1RDN25-1 TRP5P00931 707 aaKnown RBP11.4□□□□□ -0.58
RDN25-1RDN25-1 SIC1P38634 284 aa11.4□□□□□ -0.58
RDN25-1RDN25-1 MSH4P40965 878 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms