RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PLCH2O75038 1416 aa27.5■■□□□ 1.99
PHGDH-213ENST00000641272 POGZQ7Z3K3 1410 aa27.5■■□□□ 1.99
PHGDH-213ENST00000641272 SCAPERQ9BY12 1400 aa27.48■■□□□ 1.99
PHGDH-213ENST00000641272 TROQ12816 1431 aaPredicted RBP27.47■■□□□ 1.99
PHGDH-213ENST00000641272 ARHGAP5Q13017 1502 aa27.44■■□□□ 1.98
PHGDH-213ENST00000641272 CLIP1P30622 1438 aa27.43■■□□□ 1.98
PHGDH-213ENST00000641272 ILDR1Q86SU0 546 aaPredicted RBP27.42■■□□□ 1.98
PHGDH-213ENST00000641272 CDK11AQ9UQ88 783 aaPredicted RBP27.42■■□□□ 1.98
PHGDH-213ENST00000641272 MAGI2Q86UL8 1455 aa27.41■■□□□ 1.98
PHGDH-213ENST00000641272 FER1L4A9Z1Z3 1794 aa27.4■■□□□ 1.98
PHGDH-213ENST00000641272 CDC42BPBQ9Y5S2 1711 aa27.38■■□□□ 1.97
PHGDH-213ENST00000641272 PLPPR3Q6T4P5 718 aa27.37■■□□□ 1.97
PHGDH-213ENST00000641272 CASKIN1Q8WXD9 1431 aa27.37■■□□□ 1.97
PHGDH-213ENST00000641272 PREX2Q70Z35 1606 aa27.37■■□□□ 1.97
PHGDH-213ENST00000641272 CCDC18Q5T9S5 1454 aa27.37■■□□□ 1.97
PHGDH-213ENST00000641272 EFCAB2Q5VUJ9 269 aa27.35■■□□□ 1.97
PHGDH-213ENST00000641272 LMTK3Q96Q04 1460 aa27.34■■□□□ 1.97
PHGDH-213ENST00000641272 MLECQ14165 292 aa27.34■■□□□ 1.97
PHGDH-213ENST00000641272 ZNF518AQ6AHZ1 1483 aa27.32■■□□□ 1.96
PHGDH-213ENST00000641272 KDM5CP41229 1560 aa27.32■■□□□ 1.96
PHGDH-213ENST00000641272 FYCO1Q9BQS8 1478 aa27.32■■□□□ 1.96
PHGDH-213ENST00000641272 C9orf84Q5VXU9 1444 aa27.31■■□□□ 1.96
PHGDH-213ENST00000641272 ATP10AO60312 1499 aa27.29■■□□□ 1.96
PHGDH-213ENST00000641272 ABCC1P33527 1531 aa27.29■■□□□ 1.96
PHGDH-213ENST00000641272 ITSN2Q9NZM3 1697 aa27.29■■□□□ 1.96
PHGDH-213ENST00000641272 CDC42BPAQ5VT25 1732 aa27.29■■□□□ 1.96
PHGDH-213ENST00000641272 DIP2CQ9Y2E4 1556 aa27.28■■□□□ 1.96
PHGDH-213ENST00000641272 ABCA6Q8N139 1617 aa27.27■■□□□ 1.96
PHGDH-213ENST00000641272 ARHGEF12Q9NZN5 1544 aa27.26■■□□□ 1.95
PHGDH-213ENST00000641272 AFAP1Q8N556 730 aa27.23■■□□□ 1.95
PHGDH-213ENST00000641272 MYT1LQ9UL68 1186 aa27.22■■□□□ 1.95
PHGDH-213ENST00000641272 TRAPPC8Q9Y2L5 1435 aa27.19■■□□□ 1.94
PHGDH-213ENST00000641272 HSPA2P54652 639 aa27.17■■□□□ 1.94
PHGDH-213ENST00000641272 SAMD9LQ8IVG5 1584 aa27.16■■□□□ 1.94
PHGDH-213ENST00000641272 REREQ9P2R6 1566 aa27.14■■□□□ 1.94
PHGDH-213ENST00000641272 SYCP2Q9BX26 1530 aa27.14■■□□□ 1.94
PHGDH-213ENST00000641272 MLH3Q9UHC1 1453 aa27.13■■□□□ 1.93
PHGDH-213ENST00000641272 KIDINS220Q9ULH0 1771 aa27.13■■□□□ 1.93
PHGDH-213ENST00000641272 PREX1Q8TCU6 1659 aa27.13■■□□□ 1.93
PHGDH-213ENST00000641272 ZNF777Q9ULD5 760 aaPredicted RBP27.08■■□□□ 1.93
PHGDH-213ENST00000641272 GPATCH8Q9UKJ3 1502 aaKnown RBP27.07■■□□□ 1.92
PHGDH-213ENST00000641272 CEBPAP49715 358 aaPredicted RBP27.07■■□□□ 1.92
PHGDH-213ENST00000641272 C3P01024 1663 aa27.05■■□□□ 1.92
PHGDH-213ENST00000641272 AGLP35573 1532 aa27.03■■□□□ 1.92
PHGDH-213ENST00000641272 MTUS2Q5JR59 1369 aa27.02■■□□□ 1.92
PHGDH-213ENST00000641272 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
PHGDH-213ENST00000641272 TIAM1Q13009 1591 aa27■■□□□ 1.91
PHGDH-213ENST00000641272 EHBP1L1Q8N3D4 1523 aa27■■□□□ 1.91
PHGDH-213ENST00000641272 CCNB3Q8WWL7 1395 aa26.99■■□□□ 1.91
PHGDH-213ENST00000641272 INO80Q9ULG1 1556 aaPredicted RBP26.99■■□□□ 1.91
PHGDH-213ENST00000641272 SUPT6HQ7KZ85 1726 aaKnown RBP26.99■■□□□ 1.91
PHGDH-213ENST00000641272 ATP7AQ04656 1500 aa26.98■■□□□ 1.91
PHGDH-213ENST00000641272 FBXO41Q8TF61 875 aa26.96■■□□□ 1.91
PHGDH-213ENST00000641272 HNRNPMP52272 730 aaKnown RBP eCLIP26.95■■□□□ 1.91e-6■■■■□ 22.8
PHGDH-213ENST00000641272 UHRF1BP1Q6BDS2 1440 aa26.94■■□□□ 1.9
PHGDH-213ENST00000641272 CFDP1Q9UEE9 299 aaPredicted RBP26.93■■□□□ 1.9
PHGDH-213ENST00000641272 PLEKHH2Q8IVE3 1493 aa26.93■■□□□ 1.9
PHGDH-213ENST00000641272 SPAG9O60271 1321 aaKnown RBP26.92■■□□□ 1.9
PHGDH-213ENST00000641272 STRCQ7RTU9 1775 aa26.91■■□□□ 1.9
PHGDH-213ENST00000641272 PLXNC1O60486 1568 aa26.9■■□□□ 1.9
PHGDH-213ENST00000641272 ESF1Q9H501 851 aaKnown RBP26.89■■□□□ 1.9
PHGDH-213ENST00000641272 KIAA1107Q9UPP5 1409 aa26.88■■□□□ 1.89
PHGDH-213ENST00000641272 MROH2AA6NES4 1674 aa26.87■■□□□ 1.89
PHGDH-213ENST00000641272 CLTCQ00610 1675 aaKnown RBP26.87■■□□□ 1.89
PHGDH-213ENST00000641272 CNTLNQ9NXG0 1405 aa26.85■■□□□ 1.89
PHGDH-213ENST00000641272 SETD1BQ9UPS6 1966 aaKnown RBP26.85■■□□□ 1.89
PHGDH-213ENST00000641272 A2MP01023 1474 aa26.85■■□□□ 1.89
PHGDH-213ENST00000641272 ADGBQ8N7X0 1667 aa26.84■■□□□ 1.89
PHGDH-213ENST00000641272 ZNF644Q9H582 1327 aaPredicted RBP26.84■■□□□ 1.89
PHGDH-213ENST00000641272 NCOA2Q15596 1464 aa26.79■■□□□ 1.88
PHGDH-213ENST00000641272 MBD5Q9P267 1494 aa26.78■■□□□ 1.88
PHGDH-213ENST00000641272 CAMSAP2Q08AD1 1489 aa26.77■■□□□ 1.88
PHGDH-213ENST00000641272 MYO3AQ8NEV4 1616 aa26.75■■□□□ 1.87
PHGDH-213ENST00000641272 CERKQ8TCT0 537 aa26.74■■□□□ 1.87
PHGDH-213ENST00000641272 CCDC141Q6ZP82 1450 aa26.71■■□□□ 1.87
PHGDH-213ENST00000641272 NPATQ14207 1427 aa26.71■■□□□ 1.87
PHGDH-213ENST00000641272 VPS8Q8N3P4 1428 aa26.71■■□□□ 1.87
PHGDH-213ENST00000641272 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
PHGDH-213ENST00000641272 GGT6Q6P531 493 aa26.7■■□□□ 1.86
PHGDH-213ENST00000641272 ZNF142P52746 1687 aaPredicted RBP26.7■■□□□ 1.86
PHGDH-213ENST00000641272 CAMSAP1Q5T5Y3 1602 aa26.69■■□□□ 1.86
PHGDH-213ENST00000641272 LOC105371045A0A1W2PR82 267 aa26.69■■□□□ 1.86
PHGDH-213ENST00000641272 NCOA1Q15788 1441 aa26.68■■□□□ 1.86
PHGDH-213ENST00000641272 RTEL1-TNFRSF6BF6WH68 1400 aa26.65■■□□□ 1.86
PHGDH-213ENST00000641272 CEP170BQ9Y4F5 1589 aaPredicted RBP26.65■■□□□ 1.86
PHGDH-213ENST00000641272 PTPRTO14522 1441 aa26.65■■□□□ 1.86
PHGDH-213ENST00000641272 PTPRKQ15262 1439 aa26.65■■□□□ 1.86
PHGDH-213ENST00000641272 LRRC9Q6ZRR7 1453 aa26.64■■□□□ 1.86
PHGDH-213ENST00000641272 DMRT2Q9Y5R5 561 aa26.64■■□□□ 1.86
PHGDH-213ENST00000641272 ARHGEF5Q12774 1597 aa26.62■■□□□ 1.85
PHGDH-213ENST00000641272 DHX29Q7Z478 1369 aaKnown RBP26.59■■□□□ 1.85
PHGDH-213ENST00000641272 KDM5DQ9BY66 1539 aa26.57■■□□□ 1.84
PHGDH-213ENST00000641272 LTBP4Q8N2S1 1624 aa26.56■■□□□ 1.84
PHGDH-213ENST00000641272 KIF3BO15066 747 aa26.54■■□□□ 1.84
PHGDH-213ENST00000641272 NCKAP5LQ9HCH0 1330 aa26.53■■□□□ 1.84
PHGDH-213ENST00000641272 PLA2R1Q13018 1463 aa26.51■■□□□ 1.83
PHGDH-213ENST00000641272 KANK4Q5T7N3 995 aaPredicted RBP26.51■■□□□ 1.83
PHGDH-213ENST00000641272 DNMT1P26358 1616 aaKnown RBP26.5■■□□□ 1.83
PHGDH-213ENST00000641272 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
PHGDH-213ENST00000641272 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms